RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 ECE2O60344 883 aa27.2■■□□□ 1.94
LIMK1-204ENST00000476792 MYH3P11055 1940 aa27.2■■□□□ 1.94
LIMK1-204ENST00000476792 ADAMTSL1Q8N6G6 1762 aa27.2■■□□□ 1.94
LIMK1-204ENST00000476792 G3V3G9 751 aa27.19■■□□□ 1.94
LIMK1-204ENST00000476792 CASP7P55210 303 aa27.19■■□□□ 1.94
LIMK1-204ENST00000476792 DCAF8Q5TAQ9 597 aa27.19■■□□□ 1.94
LIMK1-204ENST00000476792 USP50Q70EL3 339 aaPredicted RBP27.19■■□□□ 1.94
LIMK1-204ENST00000476792 ADARB2Q9NS39 739 aaKnown RBP27.19■■□□□ 1.94
LIMK1-204ENST00000476792 E9PSI1 815 aa27.18■■□□□ 1.94
LIMK1-204ENST00000476792 BEND3Q5T5X7 828 aa27.18■■□□□ 1.94
LIMK1-204ENST00000476792 SLC4A10Q6U841 1118 aa27.18■■□□□ 1.94
LIMK1-204ENST00000476792 KCNQ5Q9NR82 932 aa27.18■■□□□ 1.94
LIMK1-204ENST00000476792 CREBZFQ9NS37 354 aa27.18■■□□□ 1.94
LIMK1-204ENST00000476792 ZBTB12Q9Y330 459 aaPredicted RBP27.18■■□□□ 1.94
LIMK1-204ENST00000476792 PSMD14O00487 310 aa27.17■■□□□ 1.94
LIMK1-204ENST00000476792 FAM161AQ3B820 660 aa27.17■■□□□ 1.94
LIMK1-204ENST00000476792 PLA2G12BQ9BX93 195 aa27.17■■□□□ 1.94
LIMK1-204ENST00000476792 MKRN1Q9UHC7 482 aaKnown RBP27.17■■□□□ 1.94
LIMK1-204ENST00000476792 XDHP47989 1333 aa27.16■■□□□ 1.94
LIMK1-204ENST00000476792 SHTN1A0MZ66 631 aa27.16■■□□□ 1.94
LIMK1-204ENST00000476792 CCER2I3L3R5 266 aa27.16■■□□□ 1.94
LIMK1-204ENST00000476792 CNOT7Q9UIV1 285 aaKnown RBP27.16■■□□□ 1.94
LIMK1-204ENST00000476792 RTL9Q8NET4 1388 aa27.15■■□□□ 1.94
LIMK1-204ENST00000476792 ITGA6P23229 1130 aa27.15■■□□□ 1.94
LIMK1-204ENST00000476792 IGHMBP2P38935 993 aaKnown RBP27.15■■□□□ 1.94
LIMK1-204ENST00000476792 SLFN5Q08AF3 891 aa27.15■■□□□ 1.94
LIMK1-204ENST00000476792 CDCA7LQ96GN5 454 aa27.15■■□□□ 1.94
LIMK1-204ENST00000476792 BSDC1Q9NW68 430 aaPredicted RBP27.15■■□□□ 1.94
LIMK1-204ENST00000476792 MINPP1Q9UNW1 487 aa27.15■■□□□ 1.94
LIMK1-204ENST00000476792 SPEF2Q9C093 1822 aa27.15■■□□□ 1.94
LIMK1-204ENST00000476792 WTIPA6NIX2 430 aaPredicted RBP27.14■■□□□ 1.94
LIMK1-204ENST00000476792 TMEM88BA6NKF7 163 aa27.14■■□□□ 1.94
LIMK1-204ENST00000476792 ATP2B4P23634 1241 aa27.14■■□□□ 1.94
LIMK1-204ENST00000476792 JMYQ8N9B5 988 aa27.14■■□□□ 1.94
LIMK1-204ENST00000476792 FMR1Q06787 632 aaKnown RBP eCLIP27.13■■□□□ 1.93
LIMK1-204ENST00000476792 MICALL2Q8IY33 904 aa27.13■■□□□ 1.93
LIMK1-204ENST00000476792 CHMP3Q9Y3E7 222 aa27.13■■□□□ 1.93
LIMK1-204ENST00000476792 H7C1D1 291 aa27.12■■□□□ 1.93
LIMK1-204ENST00000476792 CSF1RP07333 972 aa27.12■■□□□ 1.93
LIMK1-204ENST00000476792 MRPL50Q8N5N7 158 aaKnown RBP27.11■■□□□ 1.93
LIMK1-204ENST00000476792 TRPM4Q8TD43 1214 aa27.11■■□□□ 1.93
LIMK1-204ENST00000476792 MPHOSPH8Q99549 860 aa27.11■■□□□ 1.93
LIMK1-204ENST00000476792 C9orf78Q9NZ63 289 aaPredicted RBP27.11■■□□□ 1.93
LIMK1-204ENST00000476792 GRM8O00222 908 aa27.1■■□□□ 1.93
LIMK1-204ENST00000476792 TRAF5O00463 557 aa27.1■■□□□ 1.93
LIMK1-204ENST00000476792 SRCIN1Q9C0H9 1055 aa27.1■■□□□ 1.93
LIMK1-204ENST00000476792 ANKRD18BA2A2Z9 1011 aa27.09■■□□□ 1.93
LIMK1-204ENST00000476792 HIRAP54198 1017 aaPredicted RBP27.09■■□□□ 1.93
LIMK1-204ENST00000476792 FOXO4P98177 505 aa27.09■■□□□ 1.93
LIMK1-204ENST00000476792 RBM26Q5T8P6 1007 aaKnown RBP27.09■■□□□ 1.93
LIMK1-204ENST00000476792 SSH1Q8WYL5 1049 aa27.09■■□□□ 1.93
LIMK1-204ENST00000476792 ALDH1L1O75891 902 aa27.08■■□□□ 1.93
LIMK1-204ENST00000476792 CCT4P50991 539 aaKnown RBP27.08■■□□□ 1.93
LIMK1-204ENST00000476792 EPHA10Q5JZY3 1008 aa27.08■■□□□ 1.93
LIMK1-204ENST00000476792 SAMD7Q7Z3H4 446 aa27.08■■□□□ 1.93
LIMK1-204ENST00000476792 DPF2Q92785 391 aa27.08■■□□□ 1.93
LIMK1-204ENST00000476792 SCN9AQ15858 1988 aa27.08■■□□□ 1.92
LIMK1-204ENST00000476792 TBC1D10BQ4KMP7 808 aaPredicted RBP27.07■■□□□ 1.92
LIMK1-204ENST00000476792 LMBR1LQ6UX01 489 aa27.07■■□□□ 1.92
LIMK1-204ENST00000476792 ABT1Q9ULW3 272 aaKnown RBP27.07■■□□□ 1.92
LIMK1-204ENST00000476792 VIL1P09327 827 aaKnown RBP27.06■■□□□ 1.92
LIMK1-204ENST00000476792 RPS12P25398 132 aaKnown RBP27.06■■□□□ 1.92
LIMK1-204ENST00000476792 IFIT5Q13325 482 aaKnown RBP27.06■■□□□ 1.92
LIMK1-204ENST00000476792 GLIS2Q9BZE0 524 aaPredicted RBP27.05■■□□□ 1.92
LIMK1-204ENST00000476792 ANKRD2Q9GZV1 360 aa27.05■■□□□ 1.92
LIMK1-204ENST00000476792 CNTNAP1P78357 1384 aa27.05■■□□□ 1.92
LIMK1-204ENST00000476792 ZNF804BA4D1E1 1349 aa27.03■■□□□ 1.92
LIMK1-204ENST00000476792 EGFRP00533 1210 aa27.03■■□□□ 1.92
LIMK1-204ENST00000476792 KCNJ4P48050 445 aa27.03■■□□□ 1.92
LIMK1-204ENST00000476792 CHRNDQ07001 517 aa27.03■■□□□ 1.92
LIMK1-204ENST00000476792 TAF7LQ5H9L4 462 aa27.03■■□□□ 1.92
LIMK1-204ENST00000476792 ZC3H15Q8WU90 426 aaKnown RBP27.03■■□□□ 1.92
LIMK1-204ENST00000476792 MED23Q9ULK4 1368 aa27.03■■□□□ 1.92
LIMK1-204ENST00000476792 LEMD3Q9Y2U8 911 aa27.03■■□□□ 1.92
LIMK1-204ENST00000476792 KLRK1P26718 216 aa27.02■■□□□ 1.92
LIMK1-204ENST00000476792 CCDC57Q2TAC2 916 aa27.02■■□□□ 1.92
LIMK1-204ENST00000476792 PODNQ7Z5L7 613 aa27.02■■□□□ 1.92
LIMK1-204ENST00000476792 TXNRD3Q86VQ6 643 aa27.02■■□□□ 1.92
LIMK1-204ENST00000476792 HELBQ8NG08 1087 aaPredicted RBP27.02■■□□□ 1.92
LIMK1-204ENST00000476792 FBXW7Q969H0 707 aa27.02■■□□□ 1.92
LIMK1-204ENST00000476792 SUCLG2Q96I99 432 aa27.02■■□□□ 1.92
LIMK1-204ENST00000476792 ZNF594Q96JF6 807 aaPredicted RBP27.02■■□□□ 1.92
LIMK1-204ENST00000476792 PGAP2Q9UHJ9 254 aa27.02■■□□□ 1.92
LIMK1-204ENST00000476792 PTPRCP08575 1304 aa27.01■■□□□ 1.91
LIMK1-204ENST00000476792 TAF5LO75529 589 aa27.01■■□□□ 1.91
LIMK1-204ENST00000476792 VEGFBP49765 207 aa27.01■■□□□ 1.91
LIMK1-204ENST00000476792 RSBN1LQ6PCB5 846 aaPredicted RBP27.01■■□□□ 1.91
LIMK1-204ENST00000476792 SMC4Q9NTJ3 1288 aa27.01■■□□□ 1.91
LIMK1-204ENST00000476792 USP17L3A6NCW0 530 aa27■■□□□ 1.91
LIMK1-204ENST00000476792 USP17L4A6NCW7 530 aa27■■□□□ 1.91
LIMK1-204ENST00000476792 NBPF7P0C2Y1 421 aaPredicted RBP27■■□□□ 1.91
LIMK1-204ENST00000476792 HSPA1AP0DMV8 641 aaKnown RBP27■■□□□ 1.91
LIMK1-204ENST00000476792 HSPA1BP0DMV9 641 aaKnown RBP27■■□□□ 1.91
LIMK1-204ENST00000476792 DEFB115Q30KQ5 88 aa27■■□□□ 1.91
LIMK1-204ENST00000476792 CST9Q5W186 159 aa27■■□□□ 1.91
LIMK1-204ENST00000476792 USP17L1Q7RTZ2 530 aa27■■□□□ 1.91
LIMK1-204ENST00000476792 TRMT2AQ8IZ69 625 aaKnown RBP27■■□□□ 1.91
LIMK1-204ENST00000476792 ZNF408Q9H9D4 720 aa27■■□□□ 1.91
LIMK1-204ENST00000476792 SNAP23O00161 211 aa26.99■■□□□ 1.91
LIMK1-204ENST00000476792 CELF2O95319 508 aaKnown RBP26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms