RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 SCN9AQ15858 1988 aa17.19■□□□□ 0.34
HMGCS2-203ENST00000476640 COL4A1P02462 1669 aa17.18■□□□□ 0.34
HMGCS2-203ENST00000476640 PSMD14O00487 310 aa17.18■□□□□ 0.34
HMGCS2-203ENST00000476640 CELF2O95319 508 aaKnown RBP17.18■□□□□ 0.34
HMGCS2-203ENST00000476640 FMR1Q06787 632 aaKnown RBP eCLIP17.18■□□□□ 0.34
HMGCS2-203ENST00000476640 KSR2Q6VAB6 950 aa17.18■□□□□ 0.34
HMGCS2-203ENST00000476640 GGA1Q9UJY5 639 aa17.18■□□□□ 0.34
HMGCS2-203ENST00000476640 MAP3K2Q9Y2U5 619 aa17.18■□□□□ 0.34
HMGCS2-203ENST00000476640 UFL1O94874 794 aa17.17■□□□□ 0.34
HMGCS2-203ENST00000476640 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
HMGCS2-203ENST00000476640 ANKRD18AQ8IVF6 992 aa17.17■□□□□ 0.34
HMGCS2-203ENST00000476640 HHIPL1Q96JK4 782 aa17.17■□□□□ 0.34
HMGCS2-203ENST00000476640 GPR101Q96P66 508 aaPredicted RBP17.17■□□□□ 0.34
HMGCS2-203ENST00000476640 GLIS2Q9BZE0 524 aaPredicted RBP17.17■□□□□ 0.34
HMGCS2-203ENST00000476640 SEC31BQ9NQW1 1179 aa17.17■□□□□ 0.34
HMGCS2-203ENST00000476640 IL16Q14005 1332 aa17.17■□□□□ 0.34
HMGCS2-203ENST00000476640 MAP2K2P36507 400 aa17.16■□□□□ 0.34
HMGCS2-203ENST00000476640 ZEB1P37275 1124 aaPredicted RBP17.16■□□□□ 0.34
HMGCS2-203ENST00000476640 GRM1Q13255 1194 aa17.16■□□□□ 0.34
HMGCS2-203ENST00000476640 DOK7Q18PE1 504 aa17.16■□□□□ 0.34
HMGCS2-203ENST00000476640 WWC1Q8IX03 1113 aa17.16■□□□□ 0.34
HMGCS2-203ENST00000476640 TSPYL6Q8N831 410 aa17.16■□□□□ 0.34
HMGCS2-203ENST00000476640 TRPM4Q8TD43 1214 aa17.16■□□□□ 0.34
HMGCS2-203ENST00000476640 TSR2Q969E8 191 aaKnown RBP17.16■□□□□ 0.34
HMGCS2-203ENST00000476640 CDC5LQ99459 802 aaKnown RBP17.16■□□□□ 0.34
HMGCS2-203ENST00000476640 XDHP47989 1333 aa17.16■□□□□ 0.34
HMGCS2-203ENST00000476640 PI4KAP2A4QPH2 592 aa17.15■□□□□ 0.34
HMGCS2-203ENST00000476640 LBX1P52954 281 aa17.15■□□□□ 0.34
HMGCS2-203ENST00000476640 HIRAP54198 1017 aaPredicted RBP17.15■□□□□ 0.34
HMGCS2-203ENST00000476640 TWISTNBQ3B726 338 aaPredicted RBP17.15■□□□□ 0.34
HMGCS2-203ENST00000476640 CYP4F22Q6NT55 531 aa17.15■□□□□ 0.34
HMGCS2-203ENST00000476640 SAPCD2Q86UD0 394 aa17.15■□□□□ 0.34
HMGCS2-203ENST00000476640 PI4KAP1Q8N8J0 262 aa17.15■□□□□ 0.34
HMGCS2-203ENST00000476640 ZBTB12Q9Y330 459 aaPredicted RBP17.15■□□□□ 0.34
HMGCS2-203ENST00000476640 CTSWP56202 376 aa17.14■□□□□ 0.33
HMGCS2-203ENST00000476640 DCPSQ96C86 337 aaKnown RBP17.14■□□□□ 0.33
HMGCS2-203ENST00000476640 ZNF408Q9H9D4 720 aa17.14■□□□□ 0.33
HMGCS2-203ENST00000476640 HSPA8P11142 646 aaKnown RBP17.13■□□□□ 0.33
HMGCS2-203ENST00000476640 ATP2B4P23634 1241 aa17.13■□□□□ 0.33
HMGCS2-203ENST00000476640 TBC1D10BQ4KMP7 808 aaPredicted RBP17.13■□□□□ 0.33
HMGCS2-203ENST00000476640 SAMD7Q7Z3H4 446 aa17.13■□□□□ 0.33
HMGCS2-203ENST00000476640 CCDC85AQ96PX6 553 aaPredicted RBP17.13■□□□□ 0.33
HMGCS2-203ENST00000476640 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
HMGCS2-203ENST00000476640 RTL9Q8NET4 1388 aa17.13■□□□□ 0.33
HMGCS2-203ENST00000476640 SHTN1A0MZ66 631 aa17.12■□□□□ 0.33
HMGCS2-203ENST00000476640 ANP32CO43423 234 aa17.12■□□□□ 0.33
HMGCS2-203ENST00000476640 CA12O43570 354 aa17.12■□□□□ 0.33
HMGCS2-203ENST00000476640 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
HMGCS2-203ENST00000476640 VIL1P09327 827 aaKnown RBP17.12■□□□□ 0.33
HMGCS2-203ENST00000476640 CCDC184Q52MB2 194 aa17.12■□□□□ 0.33
HMGCS2-203ENST00000476640 KRT26Q7Z3Y9 468 aa17.12■□□□□ 0.33
HMGCS2-203ENST00000476640 USP48Q86UV5 1035 aa17.12■□□□□ 0.33
HMGCS2-203ENST00000476640 JARID2Q92833 1246 aaPredicted RBP17.12■□□□□ 0.33
HMGCS2-203ENST00000476640 ZNF609O15014 1411 aa17.12■□□□□ 0.33
HMGCS2-203ENST00000476640 IGKV5-2P06315 115 aa17.11■□□□□ 0.33
HMGCS2-203ENST00000476640 KIF4BQ2VIQ3 1234 aa17.11■□□□□ 0.33
HMGCS2-203ENST00000476640 RBM26Q5T8P6 1007 aaKnown RBP17.11■□□□□ 0.33
HMGCS2-203ENST00000476640 AGBL3Q8NEM8 1001 aa17.11■□□□□ 0.33
HMGCS2-203ENST00000476640 MYH16Q9H6N6 1097 aa17.11■□□□□ 0.33
HMGCS2-203ENST00000476640 KCNQ5Q9NR82 932 aa17.11■□□□□ 0.33
HMGCS2-203ENST00000476640 NEURL1BA8MQ27 555 aa17.1■□□□□ 0.33
HMGCS2-203ENST00000476640 PODNQ7Z5L7 613 aa17.1■□□□□ 0.33
HMGCS2-203ENST00000476640 TTLL11Q8NHH1 800 aa17.1■□□□□ 0.33
HMGCS2-203ENST00000476640 BSDC1Q9NW68 430 aaPredicted RBP17.1■□□□□ 0.33
HMGCS2-203ENST00000476640 AKAP11Q9UKA4 1901 aa17.09■□□□□ 0.33
HMGCS2-203ENST00000476640 BRPF1P55201 1214 aaPredicted RBP17.09■□□□□ 0.33
HMGCS2-203ENST00000476640 HUNKP57058 714 aa17.09■□□□□ 0.33
HMGCS2-203ENST00000476640 NOGQ13253 232 aa17.09■□□□□ 0.33
HMGCS2-203ENST00000476640 CWF19L2Q2TBE0 894 aaKnown RBP17.09■□□□□ 0.33
HMGCS2-203ENST00000476640 RSBN1LQ6PCB5 846 aaPredicted RBP17.09■□□□□ 0.33
HMGCS2-203ENST00000476640 UBE3BQ7Z3V4 1068 aa17.09■□□□□ 0.33
HMGCS2-203ENST00000476640 WDR63Q8IWG1 891 aa17.09■□□□□ 0.33
HMGCS2-203ENST00000476640 SULF1Q8IWU6 871 aa17.09■□□□□ 0.33
HMGCS2-203ENST00000476640 C2orf69Q8N8R5 385 aa17.09■□□□□ 0.33
HMGCS2-203ENST00000476640 MED23Q9ULK4 1368 aa17.08■□□□□ 0.32
HMGCS2-203ENST00000476640 USP17L3A6NCW0 530 aa17.08■□□□□ 0.32
HMGCS2-203ENST00000476640 USP17L4A6NCW7 530 aa17.08■□□□□ 0.32
HMGCS2-203ENST00000476640 H7C1W4 665 aa17.08■□□□□ 0.32
HMGCS2-203ENST00000476640 AOC2O75106 756 aa17.08■□□□□ 0.32
HMGCS2-203ENST00000476640 IGHMBP2P38935 993 aaKnown RBP17.08■□□□□ 0.32
HMGCS2-203ENST00000476640 FLIIQ13045 1269 aa17.08■□□□□ 0.32
HMGCS2-203ENST00000476640 FKBP5Q13451 457 aaPredicted RBP17.08■□□□□ 0.32
HMGCS2-203ENST00000476640 USP17L1Q7RTZ2 530 aa17.08■□□□□ 0.32
HMGCS2-203ENST00000476640 GREM2Q9H772 168 aa17.08■□□□□ 0.32
HMGCS2-203ENST00000476640 FANCIQ9NVI1 1328 aa17.07■□□□□ 0.32
HMGCS2-203ENST00000476640 EGFRP00533 1210 aa17.07■□□□□ 0.32
HMGCS2-203ENST00000476640 ZNF280AP59817 542 aaPredicted RBP17.07■□□□□ 0.32
HMGCS2-203ENST00000476640 GCKRQ14397 625 aa17.07■□□□□ 0.32
HMGCS2-203ENST00000476640 G2E3Q7L622 706 aa17.07■□□□□ 0.32
HMGCS2-203ENST00000476640 DNAAF4Q8WXU2 420 aa17.07■□□□□ 0.32
HMGCS2-203ENST00000476640 GBA2Q9HCG7 927 aaPredicted RBP17.07■□□□□ 0.32
HMGCS2-203ENST00000476640 MINPP1Q9UNW1 487 aa17.07■□□□□ 0.32
HMGCS2-203ENST00000476640 CASP8AP2Q9UKL3 1982 aa17.06■□□□□ 0.32
HMGCS2-203ENST00000476640 USP17L8P0C7I0 530 aa17.06■□□□□ 0.32
HMGCS2-203ENST00000476640 CCT4P50991 539 aaKnown RBP17.06■□□□□ 0.32
HMGCS2-203ENST00000476640 LINS1Q8NG48 757 aa17.06■□□□□ 0.32
HMGCS2-203ENST00000476640 PLA2G12BQ9BX93 195 aa17.06■□□□□ 0.32
HMGCS2-203ENST00000476640 ANKRD2Q9GZV1 360 aa17.06■□□□□ 0.32
HMGCS2-203ENST00000476640 GGA3Q9NZ52 723 aa17.06■□□□□ 0.32
HMGCS2-203ENST00000476640 MYO3BQ8WXR4 1341 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms