RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 TBC1D16Q8TBP0 767 aa12.92□□□□□ -0.34
CCM2-208ENST00000476594 ANKRD18BA2A2Z9 1011 aa12.91□□□□□ -0.34
CCM2-208ENST00000476594 GRM8O00222 908 aa12.91□□□□□ -0.34
CCM2-208ENST00000476594 USP50Q70EL3 339 aaPredicted RBP12.91□□□□□ -0.34
CCM2-208ENST00000476594 ANKRD2Q9GZV1 360 aa12.91□□□□□ -0.34
CCM2-208ENST00000476594 GREM2Q9H772 168 aa12.91□□□□□ -0.34
CCM2-208ENST00000476594 SMC4Q9NTJ3 1288 aa12.91□□□□□ -0.34
CCM2-208ENST00000476594 CHMP3Q9Y3E7 222 aa12.91□□□□□ -0.34
CCM2-208ENST00000476594 RIMBP2O15034 1052 aa12.9□□□□□ -0.34
CCM2-208ENST00000476594 ITGA6P23229 1130 aa12.9□□□□□ -0.34
CCM2-208ENST00000476594 CXCL9Q07325 125 aa12.9□□□□□ -0.34
CCM2-208ENST00000476594 IFIT5Q13325 482 aaKnown RBP12.9□□□□□ -0.34
CCM2-208ENST00000476594 TAF7LQ5H9L4 462 aa12.9□□□□□ -0.34
CCM2-208ENST00000476594 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
CCM2-208ENST00000476594 ADARB2Q9NS39 739 aaKnown RBP12.9□□□□□ -0.34
CCM2-208ENST00000476594 POLLQ9UGP5 575 aa12.9□□□□□ -0.34
CCM2-208ENST00000476594 TAF1P21675 1872 aa12.9□□□□□ -0.34
CCM2-208ENST00000476594 DUOX1Q9NRD9 1551 aa12.9□□□□□ -0.35
CCM2-208ENST00000476594 COL4A5P29400 1685 aa12.89□□□□□ -0.35
CCM2-208ENST00000476594 CEP350Q5VT06 3117 aa12.89□□□□□ -0.35
CCM2-208ENST00000476594 H7C1D1 291 aa12.89□□□□□ -0.35
CCM2-208ENST00000476594 ECE2O60344 883 aa12.89□□□□□ -0.35
CCM2-208ENST00000476594 RAD17O75943 681 aa12.89□□□□□ -0.35
CCM2-208ENST00000476594 CSF1RP07333 972 aa12.89□□□□□ -0.35
CCM2-208ENST00000476594 RPS12P25398 132 aaKnown RBP12.89□□□□□ -0.35
CCM2-208ENST00000476594 SCNN1DP51172 638 aa12.89□□□□□ -0.35
CCM2-208ENST00000476594 CCDC57Q2TAC2 916 aa12.89□□□□□ -0.35
CCM2-208ENST00000476594 DBNDD1Q9H9R9 158 aa12.89□□□□□ -0.35
CCM2-208ENST00000476594 GPRC5DQ9NZD1 345 aa12.89□□□□□ -0.35
CCM2-208ENST00000476594 LEMD3Q9Y2U8 911 aa12.89□□□□□ -0.35
CCM2-208ENST00000476594 KCNJ4P48050 445 aa12.88□□□□□ -0.35
CCM2-208ENST00000476594 GMPSP49915 693 aaPredicted RBP12.88□□□□□ -0.35
CCM2-208ENST00000476594 CASP7P55210 303 aa12.88□□□□□ -0.35
CCM2-208ENST00000476594 FAM161AQ3B820 660 aa12.88□□□□□ -0.35
CCM2-208ENST00000476594 SLC51AQ86UW1 340 aa12.88□□□□□ -0.35
CCM2-208ENST00000476594 SSH1Q8WYL5 1049 aa12.88□□□□□ -0.35
CCM2-208ENST00000476594 DPF2Q92785 391 aa12.88□□□□□ -0.35
CCM2-208ENST00000476594 HDAC5Q9UQL6 1122 aa12.88□□□□□ -0.35
CCM2-208ENST00000476594 MED23Q9ULK4 1368 aa12.88□□□□□ -0.35
CCM2-208ENST00000476594 KIF16BQ96L93 1317 aa12.88□□□□□ -0.35
CCM2-208ENST00000476594 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
CCM2-208ENST00000476594 PODNQ7Z5L7 613 aa12.87□□□□□ -0.35
CCM2-208ENST00000476594 TRMT2AQ8IZ69 625 aaKnown RBP12.87□□□□□ -0.35
CCM2-208ENST00000476594 CDCA7LQ96GN5 454 aa12.87□□□□□ -0.35
CCM2-208ENST00000476594 API5Q9BZZ5 524 aaKnown RBP12.87□□□□□ -0.35
CCM2-208ENST00000476594 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
CCM2-208ENST00000476594 MINPP1Q9UNW1 487 aa12.87□□□□□ -0.35
CCM2-208ENST00000476594 LTBP1Q14766 1721 aa12.86□□□□□ -0.35
CCM2-208ENST00000476594 POTEIP0CG38 1075 aa12.86□□□□□ -0.35
CCM2-208ENST00000476594 POTEJP0CG39 1038 aa12.86□□□□□ -0.35
CCM2-208ENST00000476594 EPS15P42566 896 aa12.86□□□□□ -0.35
CCM2-208ENST00000476594 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
CCM2-208ENST00000476594 LMBR1LQ6UX01 489 aa12.86□□□□□ -0.35
CCM2-208ENST00000476594 MIER1Q8N108 512 aa12.86□□□□□ -0.35
CCM2-208ENST00000476594 CNTROBQ8N137 903 aa12.86□□□□□ -0.35
CCM2-208ENST00000476594 KLRG1Q96E93 195 aa12.86□□□□□ -0.35
CCM2-208ENST00000476594 YDJCA8MPS7 323 aa12.85□□□□□ -0.35
CCM2-208ENST00000476594 PSMD14O00487 310 aa12.85□□□□□ -0.35
CCM2-208ENST00000476594 HNRNPUQ00839 825 aaKnown RBP eCLIP12.85□□□□□ -0.35
CCM2-208ENST00000476594 ZC3H15Q8WU90 426 aaKnown RBP12.85□□□□□ -0.35
CCM2-208ENST00000476594 COA1Q9GZY4 146 aa12.85□□□□□ -0.35
CCM2-208ENST00000476594 CNNM1Q9NRU3 951 aa12.85□□□□□ -0.35
CCM2-208ENST00000476594 RNF216Q9NWF9 866 aaPredicted RBP12.85□□□□□ -0.35
CCM2-208ENST00000476594 CNOT7Q9UIV1 285 aaKnown RBP12.85□□□□□ -0.35
CCM2-208ENST00000476594 ZNF804BA4D1E1 1349 aa12.85□□□□□ -0.35
CCM2-208ENST00000476594 TMEM88BA6NKF7 163 aa12.84□□□□□ -0.35
CCM2-208ENST00000476594 BRPF1P55201 1214 aaPredicted RBP12.84□□□□□ -0.35
CCM2-208ENST00000476594 FOXO4P98177 505 aa12.84□□□□□ -0.35
CCM2-208ENST00000476594 LDHAL6AQ6ZMR3 332 aa12.84□□□□□ -0.35
CCM2-208ENST00000476594 MICALL2Q8IY33 904 aa12.84□□□□□ -0.35
CCM2-208ENST00000476594 AGBL3Q8NEM8 1001 aa12.84□□□□□ -0.35
CCM2-208ENST00000476594 UTYO14607 1347 aa12.84□□□□□ -0.35
CCM2-208ENST00000476594 MYO3BQ8WXR4 1341 aa12.84□□□□□ -0.35
CCM2-208ENST00000476594 PASKQ96RG2 1323 aa12.84□□□□□ -0.35
CCM2-208ENST00000476594 ADAMTSL1Q8N6G6 1762 aa12.84□□□□□ -0.35
CCM2-208ENST00000476594 SPEF2Q9C093 1822 aa12.83□□□□□ -0.35
CCM2-208ENST00000476594 COL4A1P02462 1669 aa12.83□□□□□ -0.35
CCM2-208ENST00000476594 USP17L3A6NCW0 530 aa12.83□□□□□ -0.36
CCM2-208ENST00000476594 USP17L4A6NCW7 530 aa12.83□□□□□ -0.36
CCM2-208ENST00000476594 IPO8O15397 1037 aaKnown RBP12.83□□□□□ -0.36
CCM2-208ENST00000476594 VIL1P09327 827 aaKnown RBP12.83□□□□□ -0.36
CCM2-208ENST00000476594 MMP14P50281 582 aa12.83□□□□□ -0.36
CCM2-208ENST00000476594 CHRNDQ07001 517 aa12.83□□□□□ -0.36
CCM2-208ENST00000476594 MAP1SQ66K74 1059 aaPredicted RBP12.83□□□□□ -0.36
CCM2-208ENST00000476594 USP17L1Q7RTZ2 530 aa12.83□□□□□ -0.36
CCM2-208ENST00000476594 GPR101Q96P66 508 aaPredicted RBP12.83□□□□□ -0.36
CCM2-208ENST00000476594 ZNF609O15014 1411 aa12.82□□□□□ -0.36
CCM2-208ENST00000476594 RSBN1LQ6PCB5 846 aaPredicted RBP12.82□□□□□ -0.36
CCM2-208ENST00000476594 ZNF804AQ7Z570 1209 aa12.82□□□□□ -0.36
CCM2-208ENST00000476594 DNAJC5GQ8N7S2 189 aa12.82□□□□□ -0.36
CCM2-208ENST00000476594 ITGBL1O95965 494 aaPredicted RBP12.81□□□□□ -0.36
CCM2-208ENST00000476594 NBPF7P0C2Y1 421 aaPredicted RBP12.81□□□□□ -0.36
CCM2-208ENST00000476594 UBTFL1P0CB47 393 aaPredicted RBP12.81□□□□□ -0.36
CCM2-208ENST00000476594 RARSP54136 660 aaKnown RBP12.81□□□□□ -0.36
CCM2-208ENST00000476594 CDC37L1Q7L3B6 337 aa12.81□□□□□ -0.36
CCM2-208ENST00000476594 OGFOD1Q8N543 542 aa12.81□□□□□ -0.36
CCM2-208ENST00000476594 ARHGAP45Q92619 1136 aa12.81□□□□□ -0.36
CCM2-208ENST00000476594 FBXW7Q969H0 707 aa12.81□□□□□ -0.36
CCM2-208ENST00000476594 SUCLG2Q96I99 432 aa12.81□□□□□ -0.36
CCM2-208ENST00000476594 NOB1Q9ULX3 412 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms