RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 AOC2O75106 756 aa16.97■□□□□ 0.31
MRPL55-228ENST00000476267 RPS12P25398 132 aaKnown RBP16.97■□□□□ 0.31
MRPL55-228ENST00000476267 MAP2K2P36507 400 aa16.97■□□□□ 0.31
MRPL55-228ENST00000476267 SAMD7Q7Z3H4 446 aa16.97■□□□□ 0.31
MRPL55-228ENST00000476267 TSPYL6Q8N831 410 aa16.97■□□□□ 0.31
MRPL55-228ENST00000476267 EYA3Q99504 573 aa16.97■□□□□ 0.31
MRPL55-228ENST00000476267 METTL22Q9BUU2 404 aaPredicted RBP16.97■□□□□ 0.31
MRPL55-228ENST00000476267 SPEF2Q9C093 1822 aa16.96■□□□□ 0.31
MRPL55-228ENST00000476267 PDE8AO60658 829 aa16.96■□□□□ 0.31
MRPL55-228ENST00000476267 DOK7Q18PE1 504 aa16.96■□□□□ 0.31
MRPL55-228ENST00000476267 CCDC184Q52MB2 194 aa16.95■□□□□ 0.3
MRPL55-228ENST00000476267 DLK2Q6UY11 383 aa16.95■□□□□ 0.3
MRPL55-228ENST00000476267 PAXIP1Q6ZW49 1069 aaPredicted RBP16.95■□□□□ 0.3
MRPL55-228ENST00000476267 CWC25Q9NXE8 425 aaPredicted RBP16.95■□□□□ 0.3
MRPL55-228ENST00000476267 IGKV5-2P06315 115 aa16.94■□□□□ 0.3
MRPL55-228ENST00000476267 VIL1P09327 827 aaKnown RBP16.94■□□□□ 0.3
MRPL55-228ENST00000476267 HSP90B1P14625 803 aaKnown RBP16.94■□□□□ 0.3
MRPL55-228ENST00000476267 GRM1Q13255 1194 aa16.94■□□□□ 0.3
MRPL55-228ENST00000476267 CCDC152Q4G0S7 254 aa16.94■□□□□ 0.3
MRPL55-228ENST00000476267 CCDC30Q5VVM6 783 aa16.94■□□□□ 0.3
MRPL55-228ENST00000476267 USP48Q86UV5 1035 aa16.94■□□□□ 0.3
MRPL55-228ENST00000476267 POLR2AP24928 1970 aaKnown RBP16.94■□□□□ 0.3
MRPL55-228ENST00000476267 UFL1O94874 794 aa16.93■□□□□ 0.3
MRPL55-228ENST00000476267 CCDC27Q2M243 656 aa16.93■□□□□ 0.3
MRPL55-228ENST00000476267 TBC1D10BQ4KMP7 808 aaPredicted RBP16.93■□□□□ 0.3
MRPL55-228ENST00000476267 JARID2Q92833 1246 aaPredicted RBP16.93■□□□□ 0.3
MRPL55-228ENST00000476267 ZNF408Q9H9D4 720 aa16.93■□□□□ 0.3
MRPL55-228ENST00000476267 MAP3K2Q9Y2U5 619 aa16.93■□□□□ 0.3
MRPL55-228ENST00000476267 DDX58O95786 925 aaKnown RBP16.92■□□□□ 0.3
MRPL55-228ENST00000476267 BRPF1P55201 1214 aaPredicted RBP16.92■□□□□ 0.3
MRPL55-228ENST00000476267 KSR2Q6VAB6 950 aa16.92■□□□□ 0.3
MRPL55-228ENST00000476267 TSR2Q969E8 191 aaKnown RBP16.92■□□□□ 0.3
MRPL55-228ENST00000476267 ABHD8Q96I13 439 aa16.92■□□□□ 0.3
MRPL55-228ENST00000476267 ZC3H12CQ9C0D7 883 aaKnown RBP16.92■□□□□ 0.3
MRPL55-228ENST00000476267 GGA1Q9UJY5 639 aa16.92■□□□□ 0.3
MRPL55-228ENST00000476267 ZNF280AP59817 542 aaPredicted RBP16.91■□□□□ 0.3
MRPL55-228ENST00000476267 CCDC85AQ96PX6 553 aaPredicted RBP16.91■□□□□ 0.3
MRPL55-228ENST00000476267 GMLQ99445 158 aa16.91■□□□□ 0.3
MRPL55-228ENST00000476267 CHMP4AQ9BY43 222 aa16.91■□□□□ 0.3
MRPL55-228ENST00000476267 ANKIB1Q9P2G1 1089 aa16.91■□□□□ 0.3
MRPL55-228ENST00000476267 XDHP47989 1333 aa16.91■□□□□ 0.3
MRPL55-228ENST00000476267 PI4KAP2A4QPH2 592 aa16.9■□□□□ 0.3
MRPL55-228ENST00000476267 FAM155AB1AL88 458 aaPredicted RBP16.9■□□□□ 0.3
MRPL55-228ENST00000476267 ADM5C9JUS6 153 aa16.9■□□□□ 0.3
MRPL55-228ENST00000476267 CTSWP56202 376 aa16.9■□□□□ 0.3
MRPL55-228ENST00000476267 KIF4BQ2VIQ3 1234 aa16.9■□□□□ 0.3
MRPL55-228ENST00000476267 KRT26Q7Z3Y9 468 aa16.9■□□□□ 0.3
MRPL55-228ENST00000476267 WWC1Q8IX03 1113 aa16.9■□□□□ 0.3
MRPL55-228ENST00000476267 PI4KAP1Q8N8J0 262 aa16.9■□□□□ 0.3
MRPL55-228ENST00000476267 TTLL11Q8NHH1 800 aa16.9■□□□□ 0.3
MRPL55-228ENST00000476267 ZIC5Q96T25 663 aa16.9■□□□□ 0.3
MRPL55-228ENST00000476267 BEGAINQ9BUH8 593 aa16.9■□□□□ 0.3
MRPL55-228ENST00000476267 TSKSQ9UJT2 592 aa16.9■□□□□ 0.3
MRPL55-228ENST00000476267 ASTN2O75129 1339 aaPredicted RBP16.9■□□□□ 0.3
MRPL55-228ENST00000476267 WTIPA6NIX2 430 aaPredicted RBP16.89■□□□□ 0.29
MRPL55-228ENST00000476267 CA12O43570 354 aa16.89■□□□□ 0.29
MRPL55-228ENST00000476267 HUNKP57058 714 aa16.89■□□□□ 0.29
MRPL55-228ENST00000476267 NCBP3Q53F19 620 aaKnown RBP16.89■□□□□ 0.29
MRPL55-228ENST00000476267 G2E3Q7L622 706 aa16.89■□□□□ 0.29
MRPL55-228ENST00000476267 ANKRD18AQ8IVF6 992 aa16.89■□□□□ 0.29
MRPL55-228ENST00000476267 AGBL3Q8NEM8 1001 aa16.89■□□□□ 0.29
MRPL55-228ENST00000476267 A0A1B0GUL6 1792 aa16.89■□□□□ 0.29
MRPL55-228ENST00000476267 MED23Q9ULK4 1368 aa16.89■□□□□ 0.29
MRPL55-228ENST00000476267 NEURL1BA8MQ27 555 aa16.88■□□□□ 0.29
MRPL55-228ENST00000476267 NOGQ13253 232 aa16.88■□□□□ 0.29
MRPL55-228ENST00000476267 CWF19L2Q2TBE0 894 aaKnown RBP16.88■□□□□ 0.29
MRPL55-228ENST00000476267 RSBN1LQ6PCB5 846 aaPredicted RBP16.88■□□□□ 0.29
MRPL55-228ENST00000476267 DCPSQ96C86 337 aaKnown RBP16.88■□□□□ 0.29
MRPL55-228ENST00000476267 GREM2Q9H772 168 aa16.88■□□□□ 0.29
MRPL55-228ENST00000476267 GGA3Q9NZ52 723 aa16.88■□□□□ 0.29
MRPL55-228ENST00000476267 IL16Q14005 1332 aa16.88■□□□□ 0.29
MRPL55-228ENST00000476267 H7C1W4 665 aa16.87■□□□□ 0.29
MRPL55-228ENST00000476267 ATP2B4P23634 1241 aa16.87■□□□□ 0.29
MRPL55-228ENST00000476267 TWISTNBQ3B726 338 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-228ENST00000476267 RBM26Q5T8P6 1007 aaKnown RBP16.87■□□□□ 0.29
MRPL55-228ENST00000476267 GBA2Q9HCG7 927 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-228ENST00000476267 BSDC1Q9NW68 430 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-228ENST00000476267 CACNA1FO60840 1977 aa16.86■□□□□ 0.29
MRPL55-228ENST00000476267 CASP7P55210 303 aa16.86■□□□□ 0.29
MRPL55-228ENST00000476267 RGMBQ6NW40 437 aa16.86■□□□□ 0.29
MRPL55-228ENST00000476267 PODNQ7Z5L7 613 aa16.86■□□□□ 0.29
MRPL55-228ENST00000476267 CDC5LQ99459 802 aaKnown RBP16.86■□□□□ 0.29
MRPL55-228ENST00000476267 MINPP1Q9UNW1 487 aa16.86■□□□□ 0.29
MRPL55-228ENST00000476267 PAPPA2Q9BXP8 1791 aa16.86■□□□□ 0.29
MRPL55-228ENST00000476267 PLA2G12BQ9BX93 195 aa16.85■□□□□ 0.29
MRPL55-228ENST00000476267 STK31Q9BXU1 1019 aa16.85■□□□□ 0.29
MRPL55-228ENST00000476267 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
MRPL55-228ENST00000476267 NEXNQ0ZGT2 675 aa16.84■□□□□ 0.29
MRPL55-228ENST00000476267 SCARF1Q14162 830 aa16.84■□□□□ 0.29
MRPL55-228ENST00000476267 ANGEL2Q5VTE6 544 aaKnown RBP16.84■□□□□ 0.29
MRPL55-228ENST00000476267 C2orf69Q8N8R5 385 aa16.84■□□□□ 0.29
MRPL55-228ENST00000476267 CDCA5Q96FF9 252 aa16.84■□□□□ 0.29
MRPL55-228ENST00000476267 MYOZ2Q9NPC6 264 aa16.84■□□□□ 0.29
MRPL55-228ENST00000476267 PITPNM2Q9BZ72 1349 aa16.84■□□□□ 0.29
MRPL55-228ENST00000476267 CASP8AP2Q9UKL3 1982 aa16.84■□□□□ 0.29
MRPL55-228ENST00000476267 USP17L3A6NCW0 530 aa16.83■□□□□ 0.28
MRPL55-228ENST00000476267 USP17L4A6NCW7 530 aa16.83■□□□□ 0.28
MRPL55-228ENST00000476267 G3V3G9 751 aa16.83■□□□□ 0.28
MRPL55-228ENST00000476267 SLC10A3P09131 477 aa16.83■□□□□ 0.28
MRPL55-228ENST00000476267 USP17L8P0C7I0 530 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms