RNA–Protein interactions for RNA: ENST00000476237.5

NMD3-208, Transcript of NMD3 ribosome export adaptor, human

TSL 5

Gene NMD3, Length 685 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NMD3-208	ENST00000476237	ADAMTSL1	Q8N6G6	1762 aa		27.83	■■■□□ 2.05
NMD3-208	ENST00000476237	UFL1	O94874	794 aa		27.83	■■■□□ 2.05
NMD3-208	ENST00000476237	MRPL50	Q8N5N7	158 aa	Known RBP	27.83	■■■□□ 2.05
NMD3-208	ENST00000476237	ITGBL1	O95965	494 aa	Predicted RBP	27.82	■■■□□ 2.04
NMD3-208	ENST00000476237	GMPS	P49915	693 aa	Predicted RBP	27.82	■■■□□ 2.04
NMD3-208	ENST00000476237	TRMT2A	Q8IZ69	625 aa	Known RBP	27.82	■■■□□ 2.04
NMD3-208	ENST00000476237	KLRG1	Q96E93	195 aa		27.82	■■■□□ 2.04
NMD3-208	ENST00000476237	ZC3H12C	Q9C0D7	883 aa	Known RBP	27.82	■■■□□ 2.04
NMD3-208	ENST00000476237	XDH	P47989	1333 aa		27.82	■■■□□ 2.04
NMD3-208	ENST00000476237	PASK	Q96RG2	1323 aa		27.82	■■■□□ 2.04
NMD3-208	ENST00000476237	MYH3	P11055	1940 aa		27.82	■■■□□ 2.04
NMD3-208	ENST00000476237	DOK7	Q18PE1	504 aa		27.81	■■■□□ 2.04
NMD3-208	ENST00000476237	USP50	Q70EL3	339 aa	Predicted RBP	27.81	■■■□□ 2.04
NMD3-208	ENST00000476237	MINPP1	Q9UNW1	487 aa		27.81	■■■□□ 2.04
NMD3-208	ENST00000476237	ECE2	O60344	883 aa		27.8	■■■□□ 2.04
NMD3-208	ENST00000476237	ITGA6	P23229	1130 aa		27.8	■■■□□ 2.04
NMD3-208	ENST00000476237	FAM161A	Q3B820	660 aa		27.8	■■■□□ 2.04
NMD3-208	ENST00000476237	SLC4A10	Q6U841	1118 aa		27.8	■■■□□ 2.04
NMD3-208	ENST00000476237	ALDH1L1	O75891	902 aa		27.79	■■■□□ 2.04
NMD3-208	ENST00000476237	ATP2B4	P23634	1241 aa		27.79	■■■□□ 2.04
NMD3-208	ENST00000476237	IGHMBP2	P38935	993 aa	Known RBP	27.79	■■■□□ 2.04
NMD3-208	ENST00000476237	MAP1S	Q66K74	1059 aa	Predicted RBP	27.79	■■■□□ 2.04
NMD3-208	ENST00000476237	CNTROB	Q8N137	903 aa		27.79	■■■□□ 2.04
NMD3-208	ENST00000476237	SSH1	Q8WYL5	1049 aa		27.79	■■■□□ 2.04
NMD3-208	ENST00000476237	BCL2L13	Q9BXK5	485 aa		27.79	■■■□□ 2.04
NMD3-208	ENST00000476237	ADARB2	Q9NS39	739 aa	Known RBP	27.79	■■■□□ 2.04
NMD3-208	ENST00000476237	GRM8	O00222	908 aa		27.78	■■■□□ 2.04
NMD3-208	ENST00000476237	PSMD14	O00487	310 aa		27.78	■■■□□ 2.04
NMD3-208	ENST00000476237	FOXO4	P98177	505 aa		27.78	■■■□□ 2.04
NMD3-208	ENST00000476237	SRCIN1	Q9C0H9	1055 aa		27.78	■■■□□ 2.04
NMD3-208	ENST00000476237	KCNQ5	Q9NR82	932 aa		27.77	■■■□□ 2.04
NMD3-208	ENST00000476237	CREBZF	Q9NS37	354 aa		27.77	■■■□□ 2.04
NMD3-208	ENST00000476237	DIEXF	Q68CQ4	756 aa	Known RBP	27.76	■■■□□ 2.03
NMD3-208	ENST00000476237	PTPRC	P08575	1304 aa		27.75	■■■□□ 2.03
NMD3-208	ENST00000476237		G3V3G9	751 aa		27.75	■■■□□ 2.03
NMD3-208	ENST00000476237	DCAF8	Q5TAQ9	597 aa		27.75	■■■□□ 2.03
NMD3-208	ENST00000476237	C9orf78	Q9NZ63	289 aa	Predicted RBP	27.75	■■■□□ 2.03
NMD3-208	ENST00000476237	CNOT7	Q9UIV1	285 aa	Known RBP	27.75	■■■□□ 2.03
NMD3-208	ENST00000476237	ZBTB12	Q9Y330	459 aa	Predicted RBP	27.75	■■■□□ 2.03
NMD3-208	ENST00000476237	ANKRD18B	A2A2Z9	1011 aa		27.74	■■■□□ 2.03
NMD3-208	ENST00000476237	WTIP	A6NIX2	430 aa	Predicted RBP	27.74	■■■□□ 2.03
NMD3-208	ENST00000476237	ALDH1L2	Q3SY69	923 aa		27.74	■■■□□ 2.03
NMD3-208	ENST00000476237	MIER1	Q8N108	512 aa		27.74	■■■□□ 2.03
NMD3-208	ENST00000476237	DPF2	Q92785	391 aa		27.74	■■■□□ 2.03
NMD3-208	ENST00000476237	MPHOSPH8	Q99549	860 aa		27.74	■■■□□ 2.03
NMD3-208	ENST00000476237	CCT4	P50991	539 aa	Known RBP	27.73	■■■□□ 2.03
NMD3-208	ENST00000476237	EPHA10	Q5JZY3	1008 aa		27.73	■■■□□ 2.03
NMD3-208	ENST00000476237	JMY	Q8N9B5	988 aa		27.73	■■■□□ 2.03
NMD3-208	ENST00000476237	LMBR1L	Q6UX01	489 aa		27.72	■■■□□ 2.03
NMD3-208	ENST00000476237	MICALL2	Q8IY33	904 aa		27.72	■■■□□ 2.03
NMD3-208	ENST00000476237	SHTN1	A0MZ66	631 aa		27.71	■■■□□ 2.03
NMD3-208	ENST00000476237		H7C1D1	291 aa		27.71	■■■□□ 2.03
NMD3-208	ENST00000476237	VIL1	P09327	827 aa	Known RBP	27.71	■■■□□ 2.03
NMD3-208	ENST00000476237	CT47B1	P0C2W7	299 aa	Predicted RBP	27.71	■■■□□ 2.03
NMD3-208	ENST00000476237	RPS12	P25398	132 aa	Known RBP	27.71	■■■□□ 2.03
NMD3-208	ENST00000476237	IFIT5	Q13325	482 aa	Known RBP	27.71	■■■□□ 2.03
NMD3-208	ENST00000476237	ANKRD2	Q9GZV1	360 aa		27.71	■■■□□ 2.03
NMD3-208	ENST00000476237	CHMP3	Q9Y3E7	222 aa		27.71	■■■□□ 2.03
NMD3-208	ENST00000476237	SPEF2	Q9C093	1822 aa		27.7	■■■□□ 2.02
NMD3-208	ENST00000476237	TMEM88B	A6NKF7	163 aa		27.7	■■■□□ 2.02
NMD3-208	ENST00000476237	HIRA	P54198	1017 aa	Predicted RBP	27.7	■■■□□ 2.02
NMD3-208	ENST00000476237	LEMD3	Q9Y2U8	911 aa		27.7	■■■□□ 2.02
NMD3-208	ENST00000476237	MED23	Q9ULK4	1368 aa		27.7	■■■□□ 2.02
NMD3-208	ENST00000476237	TRPM4	Q8TD43	1214 aa		27.69	■■■□□ 2.02
NMD3-208	ENST00000476237	SMC4	Q9NTJ3	1288 aa		27.69	■■■□□ 2.02
NMD3-208	ENST00000476237	PGAP2	Q9UHJ9	254 aa		27.69	■■■□□ 2.02
NMD3-208	ENST00000476237	UTY	O14607	1347 aa		27.68	■■■□□ 2.02
NMD3-208	ENST00000476237	NBPF7	P0C2Y1	421 aa	Predicted RBP	27.68	■■■□□ 2.02
NMD3-208	ENST00000476237	CHRND	Q07001	517 aa		27.68	■■■□□ 2.02
NMD3-208	ENST00000476237	PODN	Q7Z5L7	613 aa		27.68	■■■□□ 2.02
NMD3-208	ENST00000476237	ZC3H15	Q8WU90	426 aa	Known RBP	27.67	■■■□□ 2.02
NMD3-208	ENST00000476237	SUCLG2	Q96I99	432 aa		27.67	■■■□□ 2.02
NMD3-208	ENST00000476237	SCN9A	Q15858	1988 aa		27.67	■■■□□ 2.02
NMD3-208	ENST00000476237	ZNF804B	A4D1E1	1349 aa		27.67	■■■□□ 2.02
NMD3-208	ENST00000476237	CCDC57	Q2TAC2	916 aa		27.66	■■■□□ 2.02
NMD3-208	ENST00000476237	KAZALD1	Q96I82	304 aa		27.66	■■■□□ 2.02
NMD3-208	ENST00000476237	SAMD7	Q7Z3H4	446 aa		27.65	■■■□□ 2.02
NMD3-208	ENST00000476237	TXNRD3	Q86VQ6	643 aa		27.65	■■■□□ 2.02
NMD3-208	ENST00000476237	MKRN1	Q9UHC7	482 aa	Known RBP	27.65	■■■□□ 2.02
NMD3-208	ENST00000476237	FMR1	Q06787	632 aa	Known RBP eCLIP	27.64	■■■□□ 2.02
NMD3-208	ENST00000476237	RSBN1L	Q6PCB5	846 aa	Predicted RBP	27.64	■■■□□ 2.02
NMD3-208	ENST00000476237	USP17L3	A6NCW0	530 aa		27.63	■■■□□ 2.01
NMD3-208	ENST00000476237	USP17L4	A6NCW7	530 aa		27.63	■■■□□ 2.01
NMD3-208	ENST00000476237	TRAF5	O00463	557 aa		27.63	■■■□□ 2.01
NMD3-208	ENST00000476237	BRPF1	P55201	1214 aa	Predicted RBP	27.63	■■■□□ 2.01
NMD3-208	ENST00000476237	USP17L1	Q7RTZ2	530 aa		27.63	■■■□□ 2.01
NMD3-208	ENST00000476237	AGBL3	Q8NEM8	1001 aa		27.63	■■■□□ 2.01
NMD3-208	ENST00000476237	ZNF594	Q96JF6	807 aa	Predicted RBP	27.63	■■■□□ 2.01
NMD3-208	ENST00000476237	COA1	Q9GZY4	146 aa		27.63	■■■□□ 2.01
NMD3-208	ENST00000476237	CNTNAP1	P78357	1384 aa		27.62	■■■□□ 2.01
NMD3-208	ENST00000476237	ZNF609	O15014	1411 aa		27.62	■■■□□ 2.01
NMD3-208	ENST00000476237	KLRK1	P26718	216 aa		27.62	■■■□□ 2.01
NMD3-208	ENST00000476237	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	27.62	■■■□□ 2.01
NMD3-208	ENST00000476237	TAF7L	Q5H9L4	462 aa		27.62	■■■□□ 2.01
NMD3-208	ENST00000476237	TAF5L	O75529	589 aa		27.61	■■■□□ 2.01
NMD3-208	ENST00000476237	EGFR	P00533	1210 aa		27.61	■■■□□ 2.01
NMD3-208	ENST00000476237	KCNJ4	P48050	445 aa		27.61	■■■□□ 2.01
NMD3-208	ENST00000476237	LDHAL6A	Q6ZMR3	332 aa		27.61	■■■□□ 2.01
NMD3-208	ENST00000476237	HELB	Q8NG08	1087 aa	Predicted RBP	27.61	■■■□□ 2.01
NMD3-208	ENST00000476237	GML	Q99445	158 aa		27.61	■■■□□ 2.01

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