RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 BCL9O00512 1426 aa19.03■□□□□ 0.64
VARS2-207ENST00000476162 EXOC5O00471 708 aa19.03■□□□□ 0.64
VARS2-207ENST00000476162 TOB2Q14106 344 aaPredicted RBP19.03■□□□□ 0.64
VARS2-207ENST00000476162 GIGYF2Q6Y7W6 1299 aaKnown RBP19.03■□□□□ 0.64
VARS2-207ENST00000476162 PALLDQ8WX93 1383 aa19.03■□□□□ 0.64
VARS2-207ENST00000476162 SYCE3A1L190 88 aa19.02■□□□□ 0.64
VARS2-207ENST00000476162 IFIT1P09914 478 aaKnown RBP19.02■□□□□ 0.64
VARS2-207ENST00000476162 KRT32Q14532 448 aa19.02■□□□□ 0.64
VARS2-207ENST00000476162 SYNE4Q8N205 404 aa19.02■□□□□ 0.64
VARS2-207ENST00000476162 ALDH8A1Q9H2A2 487 aaPredicted RBP19.02■□□□□ 0.64
VARS2-207ENST00000476162 CNPY2Q9Y2B0 182 aa19.02■□□□□ 0.64
VARS2-207ENST00000476162 SH3TC1Q8TE82 1336 aa19.02■□□□□ 0.64
VARS2-207ENST00000476162 CYP19A1P11511 503 aaPredicted RBP19.02■□□□□ 0.64
VARS2-207ENST00000476162 GPTP24298 496 aa19.02■□□□□ 0.64
VARS2-207ENST00000476162 SMAP1Q8IYB5 467 aaPredicted RBP19.02■□□□□ 0.64
VARS2-207ENST00000476162 PLA2G12BQ9BX93 195 aa19.02■□□□□ 0.64
VARS2-207ENST00000476162 RBSNQ9H1K0 784 aa19.02■□□□□ 0.64
VARS2-207ENST00000476162 MTMR6Q9Y217 621 aa19.02■□□□□ 0.64
VARS2-207ENST00000476162 ITGB4P16144 1822 aa19.02■□□□□ 0.63
VARS2-207ENST00000476162 CSF1RP07333 972 aa19.01■□□□□ 0.63
VARS2-207ENST00000476162 CYP21A2P08686 494 aa19.01■□□□□ 0.63
VARS2-207ENST00000476162 NEK1Q96PY6 1258 aa19.01■□□□□ 0.63
VARS2-207ENST00000476162 KAT6BQ8WYB5 2073 aa19.01■□□□□ 0.63
VARS2-207ENST00000476162 COL14A1Q05707 1796 aaKnown RBP19.01■□□□□ 0.63
VARS2-207ENST00000476162 LRSAM1Q6UWE0 723 aa19.01■□□□□ 0.63
VARS2-207ENST00000476162 TMEM87AQ8NBN3 555 aa19.01■□□□□ 0.63
VARS2-207ENST00000476162 IFIT5Q13325 482 aaKnown RBP19■□□□□ 0.63
VARS2-207ENST00000476162 TAF7LQ5H9L4 462 aa19■□□□□ 0.63
VARS2-207ENST00000476162 HELLSQ9NRZ9 838 aa19■□□□□ 0.63
VARS2-207ENST00000476162 ZBTB1Q9Y2K1 713 aa19■□□□□ 0.63
VARS2-207ENST00000476162 ATP6V1DQ9Y5K8 247 aa19■□□□□ 0.63
VARS2-207ENST00000476162 TCHHQ07283 1943 aa19■□□□□ 0.63
VARS2-207ENST00000476162 NLRP10Q86W26 655 aa19■□□□□ 0.63
VARS2-207ENST00000476162 FBXO3Q9UK99 471 aa19■□□□□ 0.63
VARS2-207ENST00000476162 VPS37CA5D8V6 355 aaPredicted RBP18.99■□□□□ 0.63
VARS2-207ENST00000476162 ADORA1P30542 326 aa18.99■□□□□ 0.63
VARS2-207ENST00000476162 ZMYM1Q5SVZ6 1142 aa18.99■□□□□ 0.63
VARS2-207ENST00000476162 XAGE2Q96GT9 111 aa18.98■□□□□ 0.63
VARS2-207ENST00000476162 AKAP2Q9Y2D5 859 aa18.98■□□□□ 0.63
VARS2-207ENST00000476162 FKBP4Q02790 459 aaKnown RBP eCLIP18.98■□□□□ 0.63
VARS2-207ENST00000476162 STK3Q13188 491 aa18.98■□□□□ 0.63
VARS2-207ENST00000476162 CCDC158Q5M9N0 1113 aa18.98■□□□□ 0.63
VARS2-207ENST00000476162 GORABQ5T7V8 394 aa18.98■□□□□ 0.63
VARS2-207ENST00000476162 LARP1BQ659C4 914 aaKnown RBP18.98■□□□□ 0.63
VARS2-207ENST00000476162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.98■□□□□ 0.63
VARS2-207ENST00000476162 CCDC173Q0VFZ6 552 aa18.97■□□□□ 0.63
VARS2-207ENST00000476162 HSP90AB3PQ58FF7 597 aa18.97■□□□□ 0.63
VARS2-207ENST00000476162 TICAM2Q86XR7 235 aa18.97■□□□□ 0.63
VARS2-207ENST00000476162 ANP32BQ92688 251 aaKnown RBP18.97■□□□□ 0.63
VARS2-207ENST00000476162 SYAP1Q96A49 352 aaPredicted RBP18.97■□□□□ 0.63
VARS2-207ENST00000476162 ROBO1Q9Y6N7 1651 aa18.97■□□□□ 0.63
VARS2-207ENST00000476162 CDHR2Q9BYE9 1310 aa18.97■□□□□ 0.63
VARS2-207ENST00000476162 RNF113AO15541 343 aaKnown RBP18.97■□□□□ 0.63
VARS2-207ENST00000476162 FIBPO43427 364 aa18.97■□□□□ 0.63
VARS2-207ENST00000476162 DNM1Q05193 864 aaKnown RBP18.97■□□□□ 0.63
VARS2-207ENST00000476162 TTC39AQ5SRH9 613 aa18.97■□□□□ 0.63
VARS2-207ENST00000476162 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.97■□□□□ 0.63
VARS2-207ENST00000476162 DSCC1Q9BVC3 393 aa18.97■□□□□ 0.63
VARS2-207ENST00000476162 Q6ZUG5 572 aa18.96■□□□□ 0.63
VARS2-207ENST00000476162 STOX1Q6ZVD7 989 aa18.96■□□□□ 0.63
VARS2-207ENST00000476162 ZSCAN30Q86W11 494 aa18.96■□□□□ 0.63
VARS2-207ENST00000476162 TTLL11Q8NHH1 800 aa18.96■□□□□ 0.63
VARS2-207ENST00000476162 PPP1R9BQ96SB3 815 aa18.96■□□□□ 0.63
VARS2-207ENST00000476162 GREM2Q9H772 168 aa18.96■□□□□ 0.63
VARS2-207ENST00000476162 MAST3O60307 1309 aa18.96■□□□□ 0.63
VARS2-207ENST00000476162 ITGA6P23229 1130 aa18.96■□□□□ 0.63
VARS2-207ENST00000476162 TPRNQ4KMQ1 711 aa18.96■□□□□ 0.63
VARS2-207ENST00000476162 TBC1D2BQ9UPU7 963 aa18.96■□□□□ 0.63
VARS2-207ENST00000476162 COL16A1Q07092 1604 aaPredicted RBP18.96■□□□□ 0.63
VARS2-207ENST00000476162 HSPD1P10809 573 aaKnown RBP18.95■□□□□ 0.62
VARS2-207ENST00000476162 IRS4O14654 1257 aaPredicted RBP18.94■□□□□ 0.62
VARS2-207ENST00000476162 ADAMTS2O95450 1211 aa18.94■□□□□ 0.62
VARS2-207ENST00000476162 CTSWP56202 376 aa18.94■□□□□ 0.62
VARS2-207ENST00000476162 UBE2HP62256 183 aa18.94■□□□□ 0.62
VARS2-207ENST00000476162 SCARF1Q14162 830 aa18.94■□□□□ 0.62
VARS2-207ENST00000476162 LDHAL6AQ6ZMR3 332 aa18.94■□□□□ 0.62
VARS2-207ENST00000476162 LRRC2Q9BYS8 371 aa18.94■□□□□ 0.62
VARS2-207ENST00000476162 TRMT112Q9UI30 125 aaKnown RBP18.94■□□□□ 0.62
VARS2-207ENST00000476162 RIPOR2Q9Y4F9 1068 aa18.94■□□□□ 0.62
VARS2-207ENST00000476162 LRP6O75581 1613 aa18.94■□□□□ 0.62
VARS2-207ENST00000476162 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.94■□□□□ 0.62
VARS2-207ENST00000476162 M0R2C6 588 aa18.94■□□□□ 0.62
VARS2-207ENST00000476162 PDCP20941 246 aa18.94■□□□□ 0.62
VARS2-207ENST00000476162 CDC37L1Q7L3B6 337 aa18.94■□□□□ 0.62
VARS2-207ENST00000476162 DZIP3Q86Y13 1208 aaKnown RBP18.94■□□□□ 0.62
VARS2-207ENST00000476162 FAM13BQ9NYF5 915 aa18.94■□□□□ 0.62
VARS2-207ENST00000476162 A0A0G2JLW4 131 aa18.93■□□□□ 0.62
VARS2-207ENST00000476162 IL6STP40189 918 aaPredicted RBP18.93■□□□□ 0.62
VARS2-207ENST00000476162 METTL24Q5JXM2 366 aa18.93■□□□□ 0.62
VARS2-207ENST00000476162 OSBP2Q969R2 916 aa18.93■□□□□ 0.62
VARS2-207ENST00000476162 PDIA4P13667 645 aaKnown RBP18.93■□□□□ 0.62
VARS2-207ENST00000476162 GTF3C6Q969F1 213 aa18.93■□□□□ 0.62
VARS2-207ENST00000476162 AHDC1Q5TGY3 1603 aaPredicted RBP18.92■□□□□ 0.62
VARS2-207ENST00000476162 PLCH1Q4KWH8 1693 aa18.92■□□□□ 0.62
VARS2-207ENST00000476162 ANKRD18BA2A2Z9 1011 aa18.92■□□□□ 0.62
VARS2-207ENST00000476162 HMGB1P09429 215 aaKnown RBP18.92■□□□□ 0.62
VARS2-207ENST00000476162 HSP90B1P14625 803 aaKnown RBP18.92■□□□□ 0.62
VARS2-207ENST00000476162 ZAP70P43403 619 aa18.92■□□□□ 0.62
VARS2-207ENST00000476162 PDE4CQ08493 712 aa18.92■□□□□ 0.62
VARS2-207ENST00000476162 ATP2B3Q16720 1220 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms