RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	UBR2	Q8IWV8	1755 aa		9.9	□□□□□ -0.82
HDAC9-223	ENST00000476135	MRC1	P22897	1456 aa		9.9	□□□□□ -0.83
HDAC9-223	ENST00000476135	ALDH1B1	P30837	517 aa		9.89	□□□□□ -0.83
HDAC9-223	ENST00000476135	HUNK	P57058	714 aa		9.89	□□□□□ -0.83
HDAC9-223	ENST00000476135	KIF23	Q02241	960 aa	Predicted RBP	9.89	□□□□□ -0.83
HDAC9-223	ENST00000476135	RGMB	Q6NW40	437 aa		9.89	□□□□□ -0.83
HDAC9-223	ENST00000476135	CDC37L1	Q7L3B6	337 aa		9.89	□□□□□ -0.83
HDAC9-223	ENST00000476135	ZC3H15	Q8WU90	426 aa	Known RBP	9.89	□□□□□ -0.83
HDAC9-223	ENST00000476135	WNT2B	Q93097	391 aa		9.89	□□□□□ -0.83
HDAC9-223	ENST00000476135	CCDC102A	Q96A19	550 aa		9.89	□□□□□ -0.83
HDAC9-223	ENST00000476135	ZNF408	Q9H9D4	720 aa		9.89	□□□□□ -0.83
HDAC9-223	ENST00000476135	GPRC5D	Q9NZD1	345 aa		9.89	□□□□□ -0.83
HDAC9-223	ENST00000476135	CAMTA2	O94983	1202 aa		9.88	□□□□□ -0.83
HDAC9-223	ENST00000476135	IL6ST	P40189	918 aa	Predicted RBP	9.88	□□□□□ -0.83
HDAC9-223	ENST00000476135	CC2D2B	Q6DHV5	1058 aa		9.88	□□□□□ -0.83
HDAC9-223	ENST00000476135	EPAS1	Q99814	870 aa		9.88	□□□□□ -0.83
HDAC9-223	ENST00000476135	RABGEF1	Q9UJ41	708 aa		9.88	□□□□□ -0.83
HDAC9-223	ENST00000476135	GRIPAP1	Q4V328	841 aa		9.87	□□□□□ -0.83
HDAC9-223	ENST00000476135	C6orf132	Q5T0Z8	1188 aa		9.87	□□□□□ -0.83
HDAC9-223	ENST00000476135	NBPF5P	Q86XG9	351 aa	Predicted RBP	9.87	□□□□□ -0.83
HDAC9-223	ENST00000476135	LARGE2	Q8N3Y3	721 aa		9.87	□□□□□ -0.83
HDAC9-223	ENST00000476135	DDX12P	Q92771	950 aa		9.87	□□□□□ -0.83
HDAC9-223	ENST00000476135	TEX13A	Q9BXU3	409 aa	Predicted RBP	9.87	□□□□□ -0.83
HDAC9-223	ENST00000476135	LGR6	Q9HBX8	967 aa		9.87	□□□□□ -0.83
HDAC9-223	ENST00000476135	RNMT	O43148	476 aa	Known RBP	9.86	□□□□□ -0.83
HDAC9-223	ENST00000476135	CDCA8	Q53HL2	280 aa		9.86	□□□□□ -0.83
HDAC9-223	ENST00000476135	AEBP1	Q8IUX7	1158 aa		9.86	□□□□□ -0.83
HDAC9-223	ENST00000476135	CDHR2	Q9BYE9	1310 aa		9.85	□□□□□ -0.83
HDAC9-223	ENST00000476135	PDIA6	Q15084	440 aa		9.85	□□□□□ -0.83
HDAC9-223	ENST00000476135	FBXO46	Q6PJ61	603 aa	Predicted RBP	9.85	□□□□□ -0.83
HDAC9-223	ENST00000476135	CLEC4G	Q6UXB4	293 aa		9.85	□□□□□ -0.83
HDAC9-223	ENST00000476135	TPTE2	Q6XPS3	522 aa		9.85	□□□□□ -0.83
HDAC9-223	ENST00000476135	NPM2	Q86SE8	214 aa	Known RBP	9.85	□□□□□ -0.83
HDAC9-223	ENST00000476135	NIM1K	Q8IY84	436 aa		9.85	□□□□□ -0.83
HDAC9-223	ENST00000476135	SLC17A8	Q8NDX2	589 aa		9.85	□□□□□ -0.83
HDAC9-223	ENST00000476135	CSRNP1	Q96S65	589 aa		9.85	□□□□□ -0.83
HDAC9-223	ENST00000476135	HDAC9	Q9UKV0	1011 aa		9.85	□□□□□ -0.83
HDAC9-223	ENST00000476135	ZNF330	Q9Y3S2	320 aa	Predicted RBP	9.85	□□□□□ -0.83
HDAC9-223	ENST00000476135	ZNF157	P51786	506 aa	Predicted RBP	9.84	□□□□□ -0.83
HDAC9-223	ENST00000476135	HIRA	P54198	1017 aa	Predicted RBP	9.84	□□□□□ -0.83
HDAC9-223	ENST00000476135	SULT6B1	Q6IMI4	303 aa		9.84	□□□□□ -0.83
HDAC9-223	ENST00000476135	C2orf69	Q8N8R5	385 aa		9.84	□□□□□ -0.83
HDAC9-223	ENST00000476135	VPS33B	Q9H267	617 aa		9.84	□□□□□ -0.83
HDAC9-223	ENST00000476135	GBA2	Q9HCG7	927 aa	Predicted RBP	9.84	□□□□□ -0.83
HDAC9-223	ENST00000476135	SLC10A3	P09131	477 aa		9.83	□□□□□ -0.84
HDAC9-223	ENST00000476135	GMPS	P49915	693 aa	Predicted RBP	9.83	□□□□□ -0.84
HDAC9-223	ENST00000476135	USP48	Q86UV5	1035 aa		9.83	□□□□□ -0.84
HDAC9-223	ENST00000476135	DZIP3	Q86Y13	1208 aa	Known RBP	9.83	□□□□□ -0.84
HDAC9-223	ENST00000476135	TTC5	Q8N0Z6	440 aa		9.83	□□□□□ -0.84
HDAC9-223	ENST00000476135	NPC1L1	Q9UHC9	1359 aa		9.83	□□□□□ -0.84
HDAC9-223	ENST00000476135	HEG1	Q9ULI3	1381 aa		9.83	□□□□□ -0.84
HDAC9-223	ENST00000476135	TNNT2	P45379	298 aa	Predicted RBP	9.82	□□□□□ -0.84
HDAC9-223	ENST00000476135	CXCL9	Q07325	125 aa		9.82	□□□□□ -0.84
HDAC9-223	ENST00000476135	NOM1	Q5C9Z4	860 aa	Known RBP	9.82	□□□□□ -0.84
HDAC9-223	ENST00000476135	ZNF296	Q8WUU4	475 aa	Predicted RBP	9.82	□□□□□ -0.84
HDAC9-223	ENST00000476135	KIAA1468	Q9P260	1216 aa		9.82	□□□□□ -0.84
HDAC9-223	ENST00000476135	ZNRF3	Q9ULT6	936 aa		9.82	□□□□□ -0.84
HDAC9-223	ENST00000476135	ZNF652	Q9Y2D9	606 aa		9.82	□□□□□ -0.84
HDAC9-223	ENST00000476135	RBBP6	Q7Z6E9	1792 aa	Known RBP	9.82	□□□□□ -0.84
HDAC9-223	ENST00000476135	PPIP5K2	O43314	1243 aa		9.81	□□□□□ -0.84
HDAC9-223	ENST00000476135	A1BG	P04217	495 aa		9.81	□□□□□ -0.84
HDAC9-223	ENST00000476135	PLCB2	Q00722	1185 aa		9.81	□□□□□ -0.84
HDAC9-223	ENST00000476135	E2F4	Q16254	413 aa		9.81	□□□□□ -0.84
HDAC9-223	ENST00000476135	CRY2	Q49AN0	593 aa		9.81	□□□□□ -0.84
HDAC9-223	ENST00000476135	INTS3	Q68E01	1043 aa	Known RBP	9.81	□□□□□ -0.84
HDAC9-223	ENST00000476135	TRPM4	Q8TD43	1214 aa		9.81	□□□□□ -0.84
HDAC9-223	ENST00000476135	ZNF496	Q96IT1	587 aa	Predicted RBP	9.81	□□□□□ -0.84
HDAC9-223	ENST00000476135	SPDYE16	A6NNV3	312 aa	Predicted RBP	9.8	□□□□□ -0.84
HDAC9-223	ENST00000476135	HOXA10	P31260	410 aa	Predicted RBP	9.8	□□□□□ -0.84
HDAC9-223	ENST00000476135	NBR1	Q14596	966 aa		9.8	□□□□□ -0.84
HDAC9-223	ENST00000476135	BCL2L13	Q9BXK5	485 aa		9.8	□□□□□ -0.84
HDAC9-223	ENST00000476135	POLR2A	P24928	1970 aa	Known RBP	9.8	□□□□□ -0.84
HDAC9-223	ENST00000476135	KIF7	Q2M1P5	1343 aa		9.8	□□□□□ -0.84
HDAC9-223	ENST00000476135	MKI67	P46013	3256 aa	Known RBP	9.8	□□□□□ -0.84
HDAC9-223	ENST00000476135		H7C1D1	291 aa		9.79	□□□□□ -0.84
HDAC9-223	ENST00000476135	TNIP1	Q15025	636 aa		9.79	□□□□□ -0.84
HDAC9-223	ENST00000476135	AOC3	Q16853	763 aa		9.79	□□□□□ -0.84
HDAC9-223	ENST00000476135	ZNF790	Q6PG37	636 aa		9.79	□□□□□ -0.84
HDAC9-223	ENST00000476135	DLK2	Q6UY11	383 aa		9.79	□□□□□ -0.84
HDAC9-223	ENST00000476135	LAPTM4B	Q86VI4	370 aa		9.79	□□□□□ -0.84
HDAC9-223	ENST00000476135	ANKK1	Q8NFD2	765 aa		9.79	□□□□□ -0.84
HDAC9-223	ENST00000476135	CNOT7	Q9UIV1	285 aa	Known RBP	9.79	□□□□□ -0.84
HDAC9-223	ENST00000476135	NIP7	Q9Y221	180 aa	Known RBP eCLIP	9.79	□□□□□ -0.84
HDAC9-223	ENST00000476135	PAPPA2	Q9BXP8	1791 aa		9.78	□□□□□ -0.84
HDAC9-223	ENST00000476135	TRIM6-TRIM34	B2RNG4	842 aa		9.78	□□□□□ -0.84
HDAC9-223	ENST00000476135	GPR25	O00155	361 aa		9.78	□□□□□ -0.84
HDAC9-223	ENST00000476135	TBC1D8	O95759	1140 aa		9.78	□□□□□ -0.84
HDAC9-223	ENST00000476135	GTF2E1	P29083	439 aa	Predicted RBP	9.78	□□□□□ -0.84
HDAC9-223	ENST00000476135	TSR1	Q2NL82	804 aa	Known RBP	9.78	□□□□□ -0.84
HDAC9-223	ENST00000476135	KRT26	Q7Z3Y9	468 aa		9.78	□□□□□ -0.84
HDAC9-223	ENST00000476135	RASAL3	Q86YV0	1011 aa		9.78	□□□□□ -0.84
HDAC9-223	ENST00000476135	SUPT20H	Q8NEM7	779 aa		9.78	□□□□□ -0.84
HDAC9-223	ENST00000476135	RIC1	Q4ADV7	1423 aa		9.78	□□□□□ -0.84
HDAC9-223	ENST00000476135	CUL9	Q8IWT3	2517 aa		9.78	□□□□□ -0.84
HDAC9-223	ENST00000476135	FAM177B	A6PVY3	158 aa		9.77	□□□□□ -0.85
HDAC9-223	ENST00000476135	IL13	P35225	146 aa		9.77	□□□□□ -0.85
HDAC9-223	ENST00000476135	BCAM	P50895	628 aa		9.77	□□□□□ -0.85
HDAC9-223	ENST00000476135	RPGR	Q92834	1020 aa	Known RBP	9.77	□□□□□ -0.85
HDAC9-223	ENST00000476135	ZFR	Q96KR1	1074 aa	Known RBP	9.77	□□□□□ -0.85
HDAC9-223	ENST00000476135	FMNL2	Q96PY5	1086 aa		9.77	□□□□□ -0.85

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