RNA–Protein interactions for RNA: ENST00000476106.5

SOD1-204, Transcript of superoxide dismutase 1, humanhuman

TSL 5

Gene SOD1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-204ENST00000476106 CCDC93Q567U6 631 aa17.26■□□□□ 0.35
SOD1-204ENST00000476106 LMBR1LQ6UX01 489 aa17.26■□□□□ 0.35
SOD1-204ENST00000476106 PLA2G12BQ9BX93 195 aa17.26■□□□□ 0.35
SOD1-204ENST00000476106 BICC1Q9H694 974 aaKnown RBP17.26■□□□□ 0.35
SOD1-204ENST00000476106 FOXO4P98177 505 aa17.25■□□□□ 0.35
SOD1-204ENST00000476106 INTS3Q68E01 1043 aaKnown RBP17.25■□□□□ 0.35
SOD1-204ENST00000476106 TMX4Q9H1E5 349 aaPredicted RBP17.25■□□□□ 0.35
SOD1-204ENST00000476106 UTYO14607 1347 aa17.24■□□□□ 0.35
SOD1-204ENST00000476106 PASKQ96RG2 1323 aa17.24■□□□□ 0.35
SOD1-204ENST00000476106 DUOX1Q9NRD9 1551 aa17.24■□□□□ 0.35
SOD1-204ENST00000476106 NFKBIEO00221 500 aa17.24■□□□□ 0.35
SOD1-204ENST00000476106 ITGA6P23229 1130 aa17.24■□□□□ 0.35
SOD1-204ENST00000476106 SOGA3Q5TF21 947 aa17.24■□□□□ 0.35
SOD1-204ENST00000476106 ANKRD18AQ8IVF6 992 aa17.24■□□□□ 0.35
SOD1-204ENST00000476106 CDC5LQ99459 802 aaKnown RBP17.24■□□□□ 0.35
SOD1-204ENST00000476106 LRRFIP2Q9Y608 721 aaKnown RBP17.24■□□□□ 0.35
SOD1-204ENST00000476106 TAF7LQ5H9L4 462 aa17.23■□□□□ 0.35
SOD1-204ENST00000476106 KAZALD1Q96I82 304 aa17.23■□□□□ 0.35
SOD1-204ENST00000476106 TAOK3Q9H2K8 898 aa17.23■□□□□ 0.35
SOD1-204ENST00000476106 ANKRD18BA2A2Z9 1011 aa17.22■□□□□ 0.35
SOD1-204ENST00000476106 RPS8P62241 208 aaKnown RBP17.22■□□□□ 0.35
SOD1-204ENST00000476106 IFIT5Q13325 482 aaKnown RBP17.22■□□□□ 0.35
SOD1-204ENST00000476106 DEFB115Q30KQ5 88 aa17.22■□□□□ 0.35
SOD1-204ENST00000476106 ANKRD44Q8N8A2 993 aa17.22■□□□□ 0.35
SOD1-204ENST00000476106 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.22■□□□□ 0.35
SOD1-204ENST00000476106 C7orf43Q8WVR3 580 aa17.22■□□□□ 0.35
SOD1-204ENST00000476106 ZNF594Q96JF6 807 aaPredicted RBP17.22■□□□□ 0.35
SOD1-204ENST00000476106 ATP6V0A2Q9Y487 856 aa17.22■□□□□ 0.35
SOD1-204ENST00000476106 RTL9Q8NET4 1388 aa17.22■□□□□ 0.35
SOD1-204ENST00000476106 BBOX1O75936 387 aa17.21■□□□□ 0.35
SOD1-204ENST00000476106 IGHMBP2P38935 993 aaKnown RBP17.21■□□□□ 0.35
SOD1-204ENST00000476106 C20orf194Q5TEA3 1177 aa17.21■□□□□ 0.35
SOD1-204ENST00000476106 BEGAINQ9BUH8 593 aa17.21■□□□□ 0.35
SOD1-204ENST00000476106 C1orf115Q9H7X2 142 aa17.21■□□□□ 0.35
SOD1-204ENST00000476106 ZNF277Q9NRM2 450 aaPredicted RBP17.21■□□□□ 0.35
SOD1-204ENST00000476106 COG6Q9Y2V7 657 aa17.21■□□□□ 0.35
SOD1-204ENST00000476106 MYH13Q9UKX3 1938 aa17.21■□□□□ 0.35
SOD1-204ENST00000476106 SNED1Q8TER0 1413 aa17.21■□□□□ 0.34
SOD1-204ENST00000476106 RASSF10A6NK89 507 aa17.2■□□□□ 0.34
SOD1-204ENST00000476106 CSF1RP07333 972 aa17.2■□□□□ 0.34
SOD1-204ENST00000476106 GNAI3P08754 354 aa17.2■□□□□ 0.34
SOD1-204ENST00000476106 CCDC57Q2TAC2 916 aa17.2■□□□□ 0.34
SOD1-204ENST00000476106 LDHDQ86WU2 507 aa17.2■□□□□ 0.34
SOD1-204ENST00000476106 RTKN2Q8IZC4 609 aa17.2■□□□□ 0.34
SOD1-204ENST00000476106 POTEIP0CG38 1075 aa17.19■□□□□ 0.34
SOD1-204ENST00000476106 POTEJP0CG39 1038 aa17.19■□□□□ 0.34
SOD1-204ENST00000476106 MS4A1P11836 297 aa17.19■□□□□ 0.34
SOD1-204ENST00000476106 RRP1P56182 461 aaKnown RBP17.19■□□□□ 0.34
SOD1-204ENST00000476106 FKBP4Q02790 459 aaKnown RBP eCLIP17.19■□□□□ 0.34
SOD1-204ENST00000476106 DPP8Q6V1X1 898 aaPredicted RBP17.19■□□□□ 0.34
SOD1-204ENST00000476106 SP8Q8IXZ3 490 aa17.19■□□□□ 0.34
SOD1-204ENST00000476106 MPNDQ8N594 471 aa17.19■□□□□ 0.34
SOD1-204ENST00000476106 GPR101Q96P66 508 aaPredicted RBP17.19■□□□□ 0.34
SOD1-204ENST00000476106 MPHOSPH8Q99549 860 aa17.19■□□□□ 0.34
SOD1-204ENST00000476106 COL4A5P29400 1685 aa17.19■□□□□ 0.34
SOD1-204ENST00000476106 WDR33Q9C0J8 1336 aaKnown RBP17.19■□□□□ 0.34
SOD1-204ENST00000476106 IQCA1LA6NCM1 817 aa17.18■□□□□ 0.34
SOD1-204ENST00000476106 GPSM2P81274 684 aa17.18■□□□□ 0.34
SOD1-204ENST00000476106 TMC4Q7Z404 712 aa17.18■□□□□ 0.34
SOD1-204ENST00000476106 KLHDC4Q8TBB5 520 aa17.18■□□□□ 0.34
SOD1-204ENST00000476106 ANKIB1Q9P2G1 1089 aa17.18■□□□□ 0.34
SOD1-204ENST00000476106 NSFL1CQ9UNZ2 370 aaKnown RBP17.18■□□□□ 0.34
SOD1-204ENST00000476106 MVPQ14764 893 aaKnown RBP17.17■□□□□ 0.34
SOD1-204ENST00000476106 RABL6Q3YEC7 729 aaPredicted RBP17.17■□□□□ 0.34
SOD1-204ENST00000476106 CC2D2BQ6DHV5 1058 aa17.17■□□□□ 0.34
SOD1-204ENST00000476106 CNNM1Q9NRU3 951 aa17.17■□□□□ 0.34
SOD1-204ENST00000476106 LTBP3Q9NS15 1303 aa17.17■□□□□ 0.34
SOD1-204ENST00000476106 SCN9AQ15858 1988 aa17.17■□□□□ 0.34
SOD1-204ENST00000476106 C6orf229H3BNL8 230 aa17.16■□□□□ 0.34
SOD1-204ENST00000476106 UFL1O94874 794 aa17.16■□□□□ 0.34
SOD1-204ENST00000476106 ITGBL1O95965 494 aaPredicted RBP17.16■□□□□ 0.34
SOD1-204ENST00000476106 GNAI2P04899 355 aa17.16■□□□□ 0.34
SOD1-204ENST00000476106 AOC3Q16853 763 aa17.16■□□□□ 0.34
SOD1-204ENST00000476106 PSME4Q14997 1843 aa17.16■□□□□ 0.34
SOD1-204ENST00000476106 PPIP5K2O43314 1243 aa17.15■□□□□ 0.34
SOD1-204ENST00000476106 IARSP41252 1262 aaKnown RBP17.15■□□□□ 0.34
SOD1-204ENST00000476106 HELBQ8NG08 1087 aaPredicted RBP17.15■□□□□ 0.34
SOD1-204ENST00000476106 SIL1Q9H173 461 aa17.15■□□□□ 0.34
SOD1-204ENST00000476106 BSDC1Q9NW68 430 aaPredicted RBP17.15■□□□□ 0.34
SOD1-204ENST00000476106 HDAC5Q9UQL6 1122 aa17.15■□□□□ 0.34
SOD1-204ENST00000476106 RIMBP2O15034 1052 aa17.14■□□□□ 0.33
SOD1-204ENST00000476106 PRPF38BQ5VTL8 546 aaKnown RBP17.14■□□□□ 0.33
SOD1-204ENST00000476106 LDHAL6AQ6ZMR3 332 aa17.14■□□□□ 0.33
SOD1-204ENST00000476106 LARGE2Q8N3Y3 721 aa17.14■□□□□ 0.33
SOD1-204ENST00000476106 PSMD1Q99460 953 aa17.14■□□□□ 0.33
SOD1-204ENST00000476106 PUS3Q9BZE2 481 aaKnown RBP17.14■□□□□ 0.33
SOD1-204ENST00000476106 XDHP47989 1333 aa17.14■□□□□ 0.33
SOD1-204ENST00000476106 SRGAP3O43295 1099 aa17.13■□□□□ 0.33
SOD1-204ENST00000476106 DDNO94850 711 aaPredicted RBP17.13■□□□□ 0.33
SOD1-204ENST00000476106 KCNJ4P48050 445 aa17.13■□□□□ 0.33
SOD1-204ENST00000476106 CHRNDQ07001 517 aa17.13■□□□□ 0.33
SOD1-204ENST00000476106 MCOLN1Q9GZU1 580 aa17.13■□□□□ 0.33
SOD1-204ENST00000476106 GGA1Q9UJY5 639 aa17.13■□□□□ 0.33
SOD1-204ENST00000476106 DDX19BQ9UMR2 479 aa17.13■□□□□ 0.33
SOD1-204ENST00000476106 MINPP1Q9UNW1 487 aa17.13■□□□□ 0.33
SOD1-204ENST00000476106 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
SOD1-204ENST00000476106 ARAP2Q8WZ64 1704 aa17.13■□□□□ 0.33
SOD1-204ENST00000476106 TAF5LO75529 589 aa17.12■□□□□ 0.33
SOD1-204ENST00000476106 PDE3AQ14432 1141 aa17.12■□□□□ 0.33
SOD1-204ENST00000476106 GRIPAP1Q4V328 841 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms