RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 CDC5LQ99459 802 aaKnown RBP24.77■■□□□ 1.56
ITGA4-207ENST00000476089 SEC31BQ9NQW1 1179 aa24.77■■□□□ 1.56
ITGA4-207ENST00000476089 RAD50Q92878 1312 aa24.77■■□□□ 1.56
ITGA4-207ENST00000476089 RFX7Q2KHR2 1363 aa24.76■■□□□ 1.55
ITGA4-207ENST00000476089 ANAPC15P60006 121 aa24.76■■□□□ 1.55
ITGA4-207ENST00000476089 SLC10A5Q5PT55 438 aa24.76■■□□□ 1.55
ITGA4-207ENST00000476089 EDC3Q96F86 508 aaKnown RBP24.76■■□□□ 1.55
ITGA4-207ENST00000476089 C4AP0C0L4 1744 aa24.76■■□□□ 1.55
ITGA4-207ENST00000476089 LRP5O75197 1615 aa24.75■■□□□ 1.55
ITGA4-207ENST00000476089 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.75■■□□□ 1.55
ITGA4-207ENST00000476089 SF3B3Q15393 1217 aaKnown RBP24.75■■□□□ 1.55
ITGA4-207ENST00000476089 PAG1Q9NWQ8 432 aa24.75■■□□□ 1.55
ITGA4-207ENST00000476089 NPHP1O15259 732 aa24.75■■□□□ 1.55
ITGA4-207ENST00000476089 NMIQ13287 307 aaPredicted RBP24.75■■□□□ 1.55
ITGA4-207ENST00000476089 TXNRD1Q16881 649 aa24.75■■□□□ 1.55
ITGA4-207ENST00000476089 VGLL2Q8N8G2 317 aa24.75■■□□□ 1.55
ITGA4-207ENST00000476089 SSFA2P28290 1259 aa24.74■■□□□ 1.55
ITGA4-207ENST00000476089 ADORA1P30542 326 aa24.74■■□□□ 1.55
ITGA4-207ENST00000476089 TICAM2Q86XR7 235 aa24.74■■□□□ 1.55
ITGA4-207ENST00000476089 LSG1Q9H089 658 aaKnown RBP24.74■■□□□ 1.55
ITGA4-207ENST00000476089 NDUFB9Q9Y6M9 179 aa24.74■■□□□ 1.55
ITGA4-207ENST00000476089 COL24A1Q17RW2 1714 aa24.73■■□□□ 1.55
ITGA4-207ENST00000476089 ABCC12Q96J65 1359 aa24.73■■□□□ 1.55
ITGA4-207ENST00000476089 PUM3Q15397 648 aaKnown RBP24.73■■□□□ 1.55
ITGA4-207ENST00000476089 KBTBD3Q8NAB2 608 aa24.73■■□□□ 1.55
ITGA4-207ENST00000476089 FAM227BQ96M60 508 aa24.73■■□□□ 1.55
ITGA4-207ENST00000476089 NLRP3Q96P20 1036 aa24.73■■□□□ 1.55
ITGA4-207ENST00000476089 GOLIM4O00461 696 aa24.72■■□□□ 1.55
ITGA4-207ENST00000476089 ST18O60284 1047 aa24.72■■□□□ 1.55
ITGA4-207ENST00000476089 DDX46Q7L014 1031 aaKnown RBP24.72■■□□□ 1.55
ITGA4-207ENST00000476089 UBR3Q6ZT12 1888 aa24.72■■□□□ 1.55
ITGA4-207ENST00000476089 HSPA4P34932 840 aa24.72■■□□□ 1.55
ITGA4-207ENST00000476089 ANKRD18AQ8IVF6 992 aa24.72■■□□□ 1.55
ITGA4-207ENST00000476089 LPIN2Q92539 896 aa24.72■■□□□ 1.55
ITGA4-207ENST00000476089 PLSCR1O15162 318 aa24.71■■□□□ 1.55
ITGA4-207ENST00000476089 APBA3O96018 575 aa24.71■■□□□ 1.55
ITGA4-207ENST00000476089 CARMIL3Q8ND23 1372 aa24.71■■□□□ 1.55
ITGA4-207ENST00000476089 SLC5A1P13866 664 aa24.7■■□□□ 1.55
ITGA4-207ENST00000476089 SPEF2Q9C093 1822 aa24.7■■□□□ 1.54
ITGA4-207ENST00000476089 A0A0D9SFI3 127 aa24.7■■□□□ 1.54
ITGA4-207ENST00000476089 FKBP4Q02790 459 aaKnown RBP eCLIP24.7■■□□□ 1.54
ITGA4-207ENST00000476089 LRRFIP1Q32MZ4 808 aaKnown RBP24.7■■□□□ 1.54
ITGA4-207ENST00000476089 HELBQ8NG08 1087 aaPredicted RBP24.7■■□□□ 1.54
ITGA4-207ENST00000476089 EP400Q96L91 3159 aa24.69■■□□□ 1.54
ITGA4-207ENST00000476089 K7ELQ4 463 aaPredicted RBP24.69■■□□□ 1.54
ITGA4-207ENST00000476089 SNRKQ9NRH2 765 aa24.69■■□□□ 1.54
ITGA4-207ENST00000476089 NFIXQ14938 502 aa24.68■■□□□ 1.54
ITGA4-207ENST00000476089 C3orf67Q6ZVT6 689 aa24.68■■□□□ 1.54
ITGA4-207ENST00000476089 PROM2Q8N271 834 aa24.68■■□□□ 1.54
ITGA4-207ENST00000476089 CCDC171Q6TFL3 1326 aa24.68■■□□□ 1.54
ITGA4-207ENST00000476089 ZNF512BQ96KM6 892 aaPredicted RBP24.68■■□□□ 1.54
ITGA4-207ENST00000476089 SLKQ9H2G2 1235 aaPredicted RBP24.68■■□□□ 1.54
ITGA4-207ENST00000476089 PALD1Q9ULE6 856 aa24.68■■□□□ 1.54
ITGA4-207ENST00000476089 FGFR2P21802 821 aa24.67■■□□□ 1.54
ITGA4-207ENST00000476089 IL27Q8NEV9 243 aa24.67■■□□□ 1.54
ITGA4-207ENST00000476089 IL17RAQ96F46 866 aa24.67■■□□□ 1.54
ITGA4-207ENST00000476089 CD2BP2O95400 341 aaKnown RBP24.66■■□□□ 1.54
ITGA4-207ENST00000476089 UQCRFS1P1P0C7P4 283 aa24.66■■□□□ 1.54
ITGA4-207ENST00000476089 KCNJ4P48050 445 aa24.66■■□□□ 1.54
ITGA4-207ENST00000476089 SPRYD3Q8NCJ5 442 aa24.66■■□□□ 1.54
ITGA4-207ENST00000476089 FBXO41Q8TF61 875 aa24.66■■□□□ 1.54
ITGA4-207ENST00000476089 MED23Q9ULK4 1368 aa24.66■■□□□ 1.54
ITGA4-207ENST00000476089 TAF5LO75529 589 aa24.65■■□□□ 1.54
ITGA4-207ENST00000476089 HSP90AA1P07900 732 aaKnown RBP24.65■■□□□ 1.54
ITGA4-207ENST00000476089 PTH1RQ03431 593 aa24.65■■□□□ 1.54
ITGA4-207ENST00000476089 CHRNDQ07001 517 aa24.65■■□□□ 1.54
ITGA4-207ENST00000476089 MCMDC2Q4G0Z9 681 aa24.65■■□□□ 1.54
ITGA4-207ENST00000476089 CNBD1Q8NA66 436 aa24.65■■□□□ 1.54
ITGA4-207ENST00000476089 ANP32EQ9BTT0 268 aa24.65■■□□□ 1.54
ITGA4-207ENST00000476089 BSDC1Q9NW68 430 aaPredicted RBP24.65■■□□□ 1.54
ITGA4-207ENST00000476089 CASZ1Q86V15 1759 aa24.65■■□□□ 1.54
ITGA4-207ENST00000476089 GYS1P13807 737 aa24.65■■□□□ 1.54
ITGA4-207ENST00000476089 NEK4P51957 841 aa24.65■■□□□ 1.54
ITGA4-207ENST00000476089 CCDC102BQ68D86 513 aa24.64■■□□□ 1.54
ITGA4-207ENST00000476089 TFCP2L1Q9NZI6 479 aa24.64■■□□□ 1.54
ITGA4-207ENST00000476089 MAP4K1Q92918 833 aa24.63■■□□□ 1.53
ITGA4-207ENST00000476089 HELLSQ9NRZ9 838 aa24.63■■□□□ 1.53
ITGA4-207ENST00000476089 RGS17Q9UGC6 210 aaPredicted RBP24.63■■□□□ 1.53
ITGA4-207ENST00000476089 ZAP70P43403 619 aa24.63■■□□□ 1.53
ITGA4-207ENST00000476089 CCDC24Q8N4L8 307 aa24.63■■□□□ 1.53
ITGA4-207ENST00000476089 ANTXR1Q9H6X2 564 aa24.63■■□□□ 1.53
ITGA4-207ENST00000476089 ARAP2Q8WZ64 1704 aa24.63■■□□□ 1.53
ITGA4-207ENST00000476089 RNF113AO15541 343 aaKnown RBP24.62■■□□□ 1.53
ITGA4-207ENST00000476089 ARID4AP29374 1257 aaPredicted RBP24.62■■□□□ 1.53
ITGA4-207ENST00000476089 SCARF1Q14162 830 aa24.62■■□□□ 1.53
ITGA4-207ENST00000476089 TTF1Q15361 905 aaPredicted RBP24.62■■□□□ 1.53
ITGA4-207ENST00000476089 RBM8AQ9Y5S9 174 aaKnown RBP24.62■■□□□ 1.53
ITGA4-207ENST00000476089 SNX14Q9Y5W7 946 aa24.62■■□□□ 1.53
ITGA4-207ENST00000476089 ZFYP08048 801 aaPredicted RBP24.61■■□□□ 1.53
ITGA4-207ENST00000476089 ZKSCAN1P17029 563 aaPredicted RBP24.61■■□□□ 1.53
ITGA4-207ENST00000476089 MCAMP43121 646 aa24.61■■□□□ 1.53
ITGA4-207ENST00000476089 MCM2P49736 904 aa24.61■■□□□ 1.53
ITGA4-207ENST00000476089 RPS8P62241 208 aaKnown RBP24.61■■□□□ 1.53
ITGA4-207ENST00000476089 PRPF40BQ6NWY9 871 aaKnown RBP24.61■■□□□ 1.53
ITGA4-207ENST00000476089 POTEAQ6S8J7 498 aa24.61■■□□□ 1.53
ITGA4-207ENST00000476089 ZNF589Q86UQ0 364 aaPredicted RBP24.61■■□□□ 1.53
ITGA4-207ENST00000476089 PHKA1P46020 1223 aa24.61■■□□□ 1.53
ITGA4-207ENST00000476089 RNF20Q5VTR2 975 aa24.61■■□□□ 1.53
ITGA4-207ENST00000476089 CELF1Q92879 486 aaKnown RBP24.61■■□□□ 1.53
ITGA4-207ENST00000476089 ST5P78524 1137 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms