RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 SYT9Q86SS6 491 aa6.9□□□□□ -1.3
SDHB-204ENST00000475049 TLR7Q9NYK1 1049 aaKnown RBP6.9□□□□□ -1.3
SDHB-204ENST00000475049 C2CD2LO14523 706 aa6.89□□□□□ -1.31
SDHB-204ENST00000475049 IRS1P35568 1242 aa6.89□□□□□ -1.31
SDHB-204ENST00000475049 PLAURQ03405 335 aa6.89□□□□□ -1.31
SDHB-204ENST00000475049 DHX32Q7L7V1 743 aaKnown RBP6.89□□□□□ -1.31
SDHB-204ENST00000475049 OR13H1Q8NG92 308 aa6.89□□□□□ -1.31
SDHB-204ENST00000475049 CCDC74AQ96AQ1 378 aa6.89□□□□□ -1.31
SDHB-204ENST00000475049 SCARF2Q96GP6 870 aaPredicted RBP6.89□□□□□ -1.31
SDHB-204ENST00000475049 DUSP9Q99956 384 aaKnown RBP6.89□□□□□ -1.31
SDHB-204ENST00000475049 UBE2OQ9C0C9 1292 aaKnown RBP6.89□□□□□ -1.31
SDHB-204ENST00000475049 CHRDQ9H2X0 955 aa6.89□□□□□ -1.31
SDHB-204ENST00000475049 MRS2Q9HD23 443 aa6.89□□□□□ -1.31
SDHB-204ENST00000475049 LRRC4BQ9NT99 713 aa6.89□□□□□ -1.31
SDHB-204ENST00000475049 NLRP2Q9NX02 1062 aa6.89□□□□□ -1.31
SDHB-204ENST00000475049 E9PSI1 815 aa6.88□□□□□ -1.31
SDHB-204ENST00000475049 MAP3K6O95382 1288 aa6.88□□□□□ -1.31
SDHB-204ENST00000475049 MAP2K3P46734 347 aa6.88□□□□□ -1.31
SDHB-204ENST00000475049 MLLT1Q03111 559 aaPredicted RBP6.88□□□□□ -1.31
SDHB-204ENST00000475049 HYAL2Q12891 473 aa6.88□□□□□ -1.31
SDHB-204ENST00000475049 ZNF468Q5VIY5 522 aaPredicted RBP6.88□□□□□ -1.31
SDHB-204ENST00000475049 NCAPG2Q86XI2 1143 aa6.88□□□□□ -1.31
SDHB-204ENST00000475049 FBF1Q8TES7 1133 aa6.88□□□□□ -1.31
SDHB-204ENST00000475049 NSUN5Q96P11 429 aaKnown RBP6.88□□□□□ -1.31
SDHB-204ENST00000475049 ENAMQ9NRM1 1142 aa6.88□□□□□ -1.31
SDHB-204ENST00000475049 PARP2Q9UGN5 583 aa6.88□□□□□ -1.31
SDHB-204ENST00000475049 GADD45BO75293 160 aaPredicted RBP6.87□□□□□ -1.31
SDHB-204ENST00000475049 EDN3P14138 238 aa6.87□□□□□ -1.31
SDHB-204ENST00000475049 RANGAP1P46060 587 aaPredicted RBP6.87□□□□□ -1.31
SDHB-204ENST00000475049 PSMD2Q13200 908 aa6.87□□□□□ -1.31
SDHB-204ENST00000475049 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.87□□□□□ -1.31
SDHB-204ENST00000475049 KANK3Q6NY19 840 aa6.87□□□□□ -1.31
SDHB-204ENST00000475049 EPS8L3Q8TE67 593 aaKnown RBP6.87□□□□□ -1.31
SDHB-204ENST00000475049 MRRFQ96E11 262 aaKnown RBP6.87□□□□□ -1.31
SDHB-204ENST00000475049 SPACA7Q96KW9 195 aa6.87□□□□□ -1.31
SDHB-204ENST00000475049 FAM161BQ96MY7 647 aa6.87□□□□□ -1.31
SDHB-204ENST00000475049 NPHS2Q9NP85 383 aa6.87□□□□□ -1.31
SDHB-204ENST00000475049 UNCXA6NJT0 531 aa6.86□□□□□ -1.31
SDHB-204ENST00000475049 SIN3BO75182 1162 aa6.86□□□□□ -1.31
SDHB-204ENST00000475049 ADH6P28332 368 aa6.86□□□□□ -1.31
SDHB-204ENST00000475049 ITGAEP38570 1179 aa6.86□□□□□ -1.31
SDHB-204ENST00000475049 PCSK7Q16549 785 aa6.86□□□□□ -1.31
SDHB-204ENST00000475049 HFE2Q6ZVN8 426 aa6.86□□□□□ -1.31
SDHB-204ENST00000475049 GALNT12Q8IXK2 581 aa6.86□□□□□ -1.31
SDHB-204ENST00000475049 DNAJB12Q9NXW2 375 aaKnown RBP6.86□□□□□ -1.31
SDHB-204ENST00000475049 SPG7Q9UQ90 795 aa6.86□□□□□ -1.31
SDHB-204ENST00000475049 NEURL1BA8MQ27 555 aa6.85□□□□□ -1.31
SDHB-204ENST00000475049 ARAFP10398 606 aa6.85□□□□□ -1.31
SDHB-204ENST00000475049 EIF2AK2P19525 551 aaKnown RBP6.85□□□□□ -1.31
SDHB-204ENST00000475049 SOX18P35713 384 aa6.85□□□□□ -1.31
SDHB-204ENST00000475049 NRLP54845 237 aa6.85□□□□□ -1.31
SDHB-204ENST00000475049 PI16Q6UXB8 463 aa6.85□□□□□ -1.31
SDHB-204ENST00000475049 OXCT2Q9BYC2 517 aaPredicted RBP6.85□□□□□ -1.31
SDHB-204ENST00000475049 RBSNQ9H1K0 784 aa6.85□□□□□ -1.31
SDHB-204ENST00000475049 AVENQ9NQS1 362 aaPredicted RBP6.85□□□□□ -1.31
SDHB-204ENST00000475049 RNF19AQ9NV58 838 aa6.85□□□□□ -1.31
SDHB-204ENST00000475049 VTI1BQ9UEU0 232 aa6.85□□□□□ -1.31
SDHB-204ENST00000475049 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.85□□□□□ -1.31
SDHB-204ENST00000475049 LOC102724428A0A0B4J2F2 783 aa6.84□□□□□ -1.31
SDHB-204ENST00000475049 J3QW42 95 aa6.84□□□□□ -1.31
SDHB-204ENST00000475049 OIP5O43482 229 aa6.84□□□□□ -1.31
SDHB-204ENST00000475049 GHRHP01286 108 aa6.84□□□□□ -1.31
SDHB-204ENST00000475049 GNA15P30679 374 aa6.84□□□□□ -1.31
SDHB-204ENST00000475049 SIK1P57059 783 aa6.84□□□□□ -1.31
SDHB-204ENST00000475049 GPLD1P80108 840 aa6.84□□□□□ -1.31
SDHB-204ENST00000475049 COL13A1Q5TAT6 717 aaPredicted RBP6.84□□□□□ -1.31
SDHB-204ENST00000475049 FAM35AQ86V20 835 aa6.84□□□□□ -1.31
SDHB-204ENST00000475049 TRPM4Q8TD43 1214 aa6.84□□□□□ -1.31
SDHB-204ENST00000475049 EHD4Q9H223 541 aa6.84□□□□□ -1.31
SDHB-204ENST00000475049 LATS2Q9NRM7 1088 aa6.84□□□□□ -1.31
SDHB-204ENST00000475049 SALL4Q9UJQ4 1053 aa6.84□□□□□ -1.31
SDHB-204ENST00000475049 GGA1Q9UJY5 639 aa6.84□□□□□ -1.31
SDHB-204ENST00000475049 CNTNAP5Q8WYK1 1306 aa6.83□□□□□ -1.32
SDHB-204ENST00000475049 SORBS3O60504 671 aa6.83□□□□□ -1.32
SDHB-204ENST00000475049 CPB1P15086 417 aa6.83□□□□□ -1.32
SDHB-204ENST00000475049 ADH7P40394 386 aa6.83□□□□□ -1.32
SDHB-204ENST00000475049 MICALL1Q8N3F8 863 aa6.83□□□□□ -1.32
SDHB-204ENST00000475049 BEND7Q8N7W2 519 aaPredicted RBP6.83□□□□□ -1.32
SDHB-204ENST00000475049 GOLGA6L1Q8N7Z2 621 aa6.83□□□□□ -1.32
SDHB-204ENST00000475049 NEDD1Q8NHV4 660 aa6.83□□□□□ -1.32
SDHB-204ENST00000475049 FRMD6Q96NE9 622 aa6.83□□□□□ -1.32
SDHB-204ENST00000475049 ZBTB42B2RXF5 422 aa6.82□□□□□ -1.32
SDHB-204ENST00000475049 KIF4AO95239 1232 aa6.82□□□□□ -1.32
SDHB-204ENST00000475049 ALAS2P22557 587 aa6.82□□□□□ -1.32
SDHB-204ENST00000475049 EIF4BP23588 611 aaKnown RBP6.82□□□□□ -1.32
SDHB-204ENST00000475049 DAB2P98082 770 aa6.82□□□□□ -1.32
SDHB-204ENST00000475049 C1orf229Q6ZS94 237 aaPredicted RBP6.82□□□□□ -1.32
SDHB-204ENST00000475049 TMC4Q7Z404 712 aa6.82□□□□□ -1.32
SDHB-204ENST00000475049 TNFRSF25Q93038 417 aa6.82□□□□□ -1.32
SDHB-204ENST00000475049 OSMRQ99650 979 aa6.82□□□□□ -1.32
SDHB-204ENST00000475049 PPP4R2Q9NY27 417 aa6.82□□□□□ -1.32
SDHB-204ENST00000475049 KIAA1522Q9P206 1035 aaPredicted RBP6.82□□□□□ -1.32
SDHB-204ENST00000475049 KLF15Q9UIH9 416 aa6.82□□□□□ -1.32
SDHB-204ENST00000475049 SLC6A14Q9UN76 642 aa6.82□□□□□ -1.32
SDHB-204ENST00000475049 A0A1W2PP55 124 aa6.81□□□□□ -1.32
SDHB-204ENST00000475049 SHISA8B8ZZ34 492 aa6.81□□□□□ -1.32
SDHB-204ENST00000475049 TRPA1O75762 1119 aa6.81□□□□□ -1.32
SDHB-204ENST00000475049 HOXD8P13378 290 aaPredicted RBP6.81□□□□□ -1.32
SDHB-204ENST00000475049 ACPPP15309 386 aa6.81□□□□□ -1.32
SDHB-204ENST00000475049 TSNAXIP1Q2TAA8 658 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms