RNA–Protein interactions for RNA: ENST00000474993.5

NPM3-204, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 2

Gene NPM3, Length 755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-204ENST00000474993 METTL24Q5JXM2 366 aa25.36■■□□□ 1.65
NPM3-204ENST00000474993 ATG9AQ7Z3C6 839 aa25.36■■□□□ 1.65
NPM3-204ENST00000474993 SP8Q8IXZ3 490 aa25.36■■□□□ 1.65
NPM3-204ENST00000474993 PUS3Q9BZE2 481 aaKnown RBP25.36■■□□□ 1.65
NPM3-204ENST00000474993 KDM2BQ8NHM5 1336 aa25.36■■□□□ 1.65
NPM3-204ENST00000474993 CC2D2BQ6DHV5 1058 aa25.35■■□□□ 1.65
NPM3-204ENST00000474993 RHPN1Q8TCX5 695 aa25.35■■□□□ 1.65
NPM3-204ENST00000474993 AKAP2Q9Y2D5 859 aa25.35■■□□□ 1.65
NPM3-204ENST00000474993 ATP6V0A2Q9Y487 856 aa25.35■■□□□ 1.65
NPM3-204ENST00000474993 APBB1O00213 710 aa25.34■■□□□ 1.65
NPM3-204ENST00000474993 KCNA3P22001 575 aa25.34■■□□□ 1.65
NPM3-204ENST00000474993 GRIPAP1Q4V328 841 aa25.34■■□□□ 1.65
NPM3-204ENST00000474993 ANKRD45Q5TZF3 282 aa25.34■■□□□ 1.65
NPM3-204ENST00000474993 PRPF40BQ6NWY9 871 aaKnown RBP25.34■■□□□ 1.65
NPM3-204ENST00000474993 FHDC1Q9C0D6 1143 aaPredicted RBP25.34■■□□□ 1.65
NPM3-204ENST00000474993 MINPP1Q9UNW1 487 aa25.34■■□□□ 1.65
NPM3-204ENST00000474993 DALRD3Q5D0E6 543 aaKnown RBP25.33■■□□□ 1.65
NPM3-204ENST00000474993 SOGA3Q5TF21 947 aa25.33■■□□□ 1.65
NPM3-204ENST00000474993 CLASRPQ8N2M8 674 aaKnown RBP25.33■■□□□ 1.65
NPM3-204ENST00000474993 GPR108Q9NPR9 543 aa25.33■■□□□ 1.65
NPM3-204ENST00000474993 CHRNDQ07001 517 aa25.32■■□□□ 1.64
NPM3-204ENST00000474993 LRP5O75197 1615 aa25.32■■□□□ 1.64
NPM3-204ENST00000474993 SASH1O94885 1247 aa25.31■■□□□ 1.64
NPM3-204ENST00000474993 PDE8BO95263 885 aa25.31■■□□□ 1.64
NPM3-204ENST00000474993 NUCB1Q02818 461 aa25.31■■□□□ 1.64
NPM3-204ENST00000474993 TFCP2Q12800 502 aa25.31■■□□□ 1.64
NPM3-204ENST00000474993 COL11A2P13942 1736 aaPredicted RBP25.31■■□□□ 1.64
NPM3-204ENST00000474993 SYT17Q9BSW7 474 aa25.3■■□□□ 1.64
NPM3-204ENST00000474993 ANKIB1Q9P2G1 1089 aa25.3■■□□□ 1.64
NPM3-204ENST00000474993 XDHP47989 1333 aa25.3■■□□□ 1.64
NPM3-204ENST00000474993 KCNJ4P48050 445 aa25.29■■□□□ 1.64
NPM3-204ENST00000474993 CHD1LQ86WJ1 897 aa25.29■■□□□ 1.64
NPM3-204ENST00000474993 LEMD3Q9Y2U8 911 aa25.29■■□□□ 1.64
NPM3-204ENST00000474993 PUM3Q15397 648 aaKnown RBP25.28■■□□□ 1.64
NPM3-204ENST00000474993 DLEC1Q9Y238 1755 aa25.28■■□□□ 1.64
NPM3-204ENST00000474993 ATP2B4P23634 1241 aa25.27■■□□□ 1.64
NPM3-204ENST00000474993 UBE4AQ14139 1066 aa25.27■■□□□ 1.64
NPM3-204ENST00000474993 MPNDQ8N594 471 aa25.27■■□□□ 1.64
NPM3-204ENST00000474993 VGLL2Q8N8G2 317 aa25.27■■□□□ 1.64
NPM3-204ENST00000474993 NLGN2Q8NFZ4 835 aa25.27■■□□□ 1.64
NPM3-204ENST00000474993 IL1RAPL2Q9NP60 686 aa25.27■■□□□ 1.64
NPM3-204ENST00000474993 PODXL2Q9NZ53 605 aa25.27■■□□□ 1.64
NPM3-204ENST00000474993 NSFL1CQ9UNZ2 370 aaKnown RBP25.27■■□□□ 1.64
NPM3-204ENST00000474993 IFIT1P09914 478 aaKnown RBP25.26■■□□□ 1.63
NPM3-204ENST00000474993 ATP2B3Q16720 1220 aa25.26■■□□□ 1.63
NPM3-204ENST00000474993 CCDC93Q567U6 631 aa25.26■■□□□ 1.63
NPM3-204ENST00000474993 TNNI3KQ59H18 835 aa25.26■■□□□ 1.63
NPM3-204ENST00000474993 RTKN2Q8IZC4 609 aa25.26■■□□□ 1.63
NPM3-204ENST00000474993 HELBQ8NG08 1087 aaPredicted RBP25.26■■□□□ 1.63
NPM3-204ENST00000474993 C7orf43Q8WVR3 580 aa25.26■■□□□ 1.63
NPM3-204ENST00000474993 LPIN2Q92539 896 aa25.26■■□□□ 1.63
NPM3-204ENST00000474993 FPGT-TNNI3KV9GXZ4 949 aa25.26■■□□□ 1.63
NPM3-204ENST00000474993 TAF5LO75529 589 aa25.25■■□□□ 1.63
NPM3-204ENST00000474993 IFIT2P09913 472 aaKnown RBP25.25■■□□□ 1.63
NPM3-204ENST00000474993 SLC5A1P13866 664 aa25.25■■□□□ 1.63
NPM3-204ENST00000474993 DPP8Q6V1X1 898 aaPredicted RBP25.25■■□□□ 1.63
NPM3-204ENST00000474993 GGA1Q9UJY5 639 aa25.25■■□□□ 1.63
NPM3-204ENST00000474993 BCS1LQ9Y276 419 aa25.25■■□□□ 1.63
NPM3-204ENST00000474993 TAF1P21675 1872 aa25.24■■□□□ 1.63
NPM3-204ENST00000474993 C21orf2O43822 256 aa25.24■■□□□ 1.63
NPM3-204ENST00000474993 SMARCA5O60264 1052 aaPredicted RBP25.24■■□□□ 1.63
NPM3-204ENST00000474993 GPSM2P81274 684 aa25.24■■□□□ 1.63
NPM3-204ENST00000474993 AACSQ86V21 672 aa25.24■■□□□ 1.63
NPM3-204ENST00000474993 SUPT20HQ8NEM7 779 aa25.24■■□□□ 1.63
NPM3-204ENST00000474993 LNPKQ9C0E8 428 aa25.24■■□□□ 1.63
NPM3-204ENST00000474993 KIAA1551Q9HCM1 1747 aa25.23■■□□□ 1.63
NPM3-204ENST00000474993 ZNF804BA4D1E1 1349 aa25.23■■□□□ 1.63
NPM3-204ENST00000474993 GPATCH3Q96I76 525 aa25.23■■□□□ 1.63
NPM3-204ENST00000474993 NEUROD6Q96NK8 337 aa25.23■■□□□ 1.63
NPM3-204ENST00000474993 ZNF219Q9P2Y4 722 aaPredicted RBP25.23■■□□□ 1.63
NPM3-204ENST00000474993 COL4A1P02462 1669 aa25.23■■□□□ 1.63
NPM3-204ENST00000474993 A0A1B0GUL7 405 aa25.22■■□□□ 1.63
NPM3-204ENST00000474993 EYA3Q99504 573 aa25.22■■□□□ 1.63
NPM3-204ENST00000474993 BCL11AQ9H165 835 aa25.22■■□□□ 1.63
NPM3-204ENST00000474993 SPEF2Q9C093 1822 aa25.21■■□□□ 1.63
NPM3-204ENST00000474993 UFL1O94874 794 aa25.21■■□□□ 1.63
NPM3-204ENST00000474993 FGFR2P21802 821 aa25.21■■□□□ 1.63
NPM3-204ENST00000474993 GORABQ5T7V8 394 aa25.21■■□□□ 1.63
NPM3-204ENST00000474993 EAF2Q96CJ1 260 aaPredicted RBP25.21■■□□□ 1.63
NPM3-204ENST00000474993 SLX4Q8IY92 1834 aa25.21■■□□□ 1.63
NPM3-204ENST00000474993 C6orf229H3BNL8 230 aa25.2■■□□□ 1.62
NPM3-204ENST00000474993 TIMM10P62072 90 aa25.19■■□□□ 1.62
NPM3-204ENST00000474993 CAVIN4Q5BKX8 364 aa25.19■■□□□ 1.62
NPM3-204ENST00000474993 TBC1D16Q8TBP0 767 aa25.19■■□□□ 1.62
NPM3-204ENST00000474993 ZNF609O15014 1411 aa25.19■■□□□ 1.62
NPM3-204ENST00000474993 LRRC37AA6NMS7 1700 aa25.18■■□□□ 1.62
NPM3-204ENST00000474993 CCDC158Q5M9N0 1113 aa25.18■■□□□ 1.62
NPM3-204ENST00000474993 C15orf52Q6ZUT6 534 aaKnown RBP25.18■■□□□ 1.62
NPM3-204ENST00000474993 PSMD1Q99460 953 aa25.18■■□□□ 1.62
NPM3-204ENST00000474993 RTFDC1Q9BY42 306 aaPredicted RBP25.18■■□□□ 1.62
NPM3-204ENST00000474993 CCDC8Q9H0W5 538 aaPredicted RBP25.18■■□□□ 1.62
NPM3-204ENST00000474993 XAGE2Q96GT9 111 aa25.17■■□□□ 1.62
NPM3-204ENST00000474993 VPS33BQ9H267 617 aa25.17■■□□□ 1.62
NPM3-204ENST00000474993 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.17■■□□□ 1.62
NPM3-204ENST00000474993 OLFM4Q6UX06 510 aa25.16■■□□□ 1.62
NPM3-204ENST00000474993 VPS37DQ86XT2 251 aa25.16■■□□□ 1.62
NPM3-204ENST00000474993 ZC3H12CQ9C0D7 883 aaKnown RBP25.16■■□□□ 1.62
NPM3-204ENST00000474993 GNL3LQ9NVN8 582 aaKnown RBP25.16■■□□□ 1.62
NPM3-204ENST00000474993 POLLQ9UGP5 575 aa25.16■■□□□ 1.62
NPM3-204ENST00000474993 WWC3Q9ULE0 1092 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms