RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 BSDC1Q9NW68 430 aaPredicted RBP4.88□□□□□ -1.63
USP16-205ENST00000474835 BABAM1Q9NWV8 329 aa4.88□□□□□ -1.63
USP16-205ENST00000474835 L1RE1Q9UN81 338 aa4.88□□□□□ -1.63
USP16-205ENST00000474835 ATRNO75882 1429 aa4.88□□□□□ -1.63
USP16-205ENST00000474835 KLHL33A6NCF5 533 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 VGLL3A8MV65 326 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 EFCAB8A8MWE9 144 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 GOLGA6L22H0YM25 854 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 H7C1W4 665 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 LIG1P18858 919 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 IRX3P78415 501 aaPredicted RBP4.87□□□□□ -1.63
USP16-205ENST00000474835 KRT24Q2M2I5 525 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 ADAMTS13Q76LX8 1427 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 VIPAS39Q9H9C1 493 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 RAI14Q9P0K7 980 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 BCCIPQ9P287 314 aaKnown RBP eCLIP4.87□□□□□ -1.63
USP16-205ENST00000474835 DCAF8L1A6NGE4 600 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 SYF2O95926 243 aaKnown RBP4.87□□□□□ -1.63
USP16-205ENST00000474835 PRR29P0C7W0 189 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 KCNJ4P48050 445 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 WDR93Q6P2C0 686 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 LRRC31Q6UY01 552 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 SMC4Q9NTJ3 1288 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 MCM8Q9UJA3 840 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 RCOR1Q9UKL0 485 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 CCDC88AQ3V6T2 1871 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 MDM2Q00987 491 aaPredicted RBP4.87□□□□□ -1.63
USP16-205ENST00000474835 TRDNQ13061 729 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 MAP9Q49MG5 647 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 YTHDF3Q7Z739 585 aaKnown RBP4.87□□□□□ -1.63
USP16-205ENST00000474835 TXLNBQ8N3L3 684 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 ZNF622Q969S3 477 aaKnown RBP eCLIP4.87□□□□□ -1.632e-6■□□□□ 10.9
USP16-205ENST00000474835 MKL1Q969V6 931 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 TUBE1Q9UJT0 475 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 HPSEQ9Y251 543 aa4.87□□□□□ -1.63
USP16-205ENST00000474835 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.87□□□□□ -1.633e-6■■□□□ 13.1
USP16-205ENST00000474835 MINK1Q8N4C8 1332 aaPredicted RBP4.87□□□□□ -1.63
USP16-205ENST00000474835 ZNFX1Q9P2E3 1918 aaKnown RBP4.86□□□□□ -1.63
USP16-205ENST00000474835 STX6O43752 255 aa4.86□□□□□ -1.63
USP16-205ENST00000474835 ST18O60284 1047 aa4.86□□□□□ -1.63
USP16-205ENST00000474835 SLU7O95391 586 aaKnown RBP4.86□□□□□ -1.63
USP16-205ENST00000474835 ZNF18P17022 549 aa4.86□□□□□ -1.63
USP16-205ENST00000474835 CEP135Q66GS9 1140 aa4.86□□□□□ -1.63
USP16-205ENST00000474835 C6orf89Q6UWU4 347 aa4.86□□□□□ -1.63
USP16-205ENST00000474835 MED15Q96RN5 788 aa4.86□□□□□ -1.63
USP16-205ENST00000474835 BCL2L13Q9BXK5 485 aa4.86□□□□□ -1.63
USP16-205ENST00000474835 SH3TC1Q8TE82 1336 aa4.86□□□□□ -1.63
USP16-205ENST00000474835 AGPSO00116 658 aa4.86□□□□□ -1.63
USP16-205ENST00000474835 KIF2AO00139 706 aaPredicted RBP4.86□□□□□ -1.63
USP16-205ENST00000474835 MYO1BO43795 1136 aa4.86□□□□□ -1.63
USP16-205ENST00000474835 C11orf57Q6ZUT1 292 aaPredicted RBP4.86□□□□□ -1.63
USP16-205ENST00000474835 FMR1NBQ8N0W7 255 aaPredicted RBP4.86□□□□□ -1.63
USP16-205ENST00000474835 SYAP1Q96A49 352 aaPredicted RBP4.86□□□□□ -1.63
USP16-205ENST00000474835 GOLPH3LQ9H4A5 285 aa4.86□□□□□ -1.63
USP16-205ENST00000474835 AKAP2Q9Y2D5 859 aa4.86□□□□□ -1.63
USP16-205ENST00000474835 TRIM66O15016 1216 aa4.86□□□□□ -1.63
USP16-205ENST00000474835 BRD2P25440 801 aaKnown RBP4.86□□□□□ -1.63
USP16-205ENST00000474835 MLECQ14165 292 aa4.86□□□□□ -1.63
USP16-205ENST00000474835 ELF2Q15723 593 aa4.86□□□□□ -1.63
USP16-205ENST00000474835 CDCA2Q69YH5 1023 aaPredicted RBP4.86□□□□□ -1.63
USP16-205ENST00000474835 USP6P35125 1406 aa4.86□□□□□ -1.63
USP16-205ENST00000474835 RASSF9O75901 435 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 ZBTB48P10074 688 aaPredicted RBP4.85□□□□□ -1.63
USP16-205ENST00000474835 EPB41P11171 864 aaKnown RBP4.85□□□□□ -1.63
USP16-205ENST00000474835 ACTN2P35609 894 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 ATP8B2P98198 1209 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 NUTM1Q86Y26 1132 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 MAP4K1Q92918 833 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 API5Q9BZZ5 524 aaKnown RBP4.85□□□□□ -1.63
USP16-205ENST00000474835 DNAI1Q9UI46 699 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 RRP7AQ9Y3A4 280 aaKnown RBP4.85□□□□□ -1.63
USP16-205ENST00000474835 ARFGEF1Q9Y6D6 1849 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 GREB1LQ9C091 1923 aaPredicted RBP4.85□□□□□ -1.63
USP16-205ENST00000474835 FSBPO95073 299 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 CTDNEP1O95476 244 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 AK2P54819 239 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 FAM228AQ86W67 206 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 ITPRIPQ8IWB1 547 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 IKBKBO14920 756 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 FAM163BP0C2L3 166 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 TNFRSF8P28908 595 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 AMPHP49418 695 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 EPHA10Q5JZY3 1008 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 FOXR1Q6PIV2 292 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 EVC2Q86UK5 1308 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 NRXN2Q9P2S2 1712 aa4.85□□□□□ -1.63
USP16-205ENST00000474835 COL1A1P02452 1464 aaPredicted RBP4.84□□□□□ -1.63
USP16-205ENST00000474835 CCDC172P0C7W6 258 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 TNNT1P13805 278 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 GYS2P54840 703 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 ATL3Q6DD88 541 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 CCDC186Q7Z3E2 898 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 LEO1Q8WVC0 666 aaPredicted RBP4.84□□□□□ -1.63
USP16-205ENST00000474835 PURBQ96QR8 312 aaKnown RBP4.84□□□□□ -1.63
USP16-205ENST00000474835 SRRTQ9BXP5 876 aaKnown RBP4.84□□□□□ -1.63
USP16-205ENST00000474835 DDX19AQ9NUU7 478 aaKnown RBP4.84□□□□□ -1.63
USP16-205ENST00000474835 RRP15Q9Y3B9 282 aaKnown RBP4.84□□□□□ -1.63
USP16-205ENST00000474835 CEP83Q9Y592 693 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 IGSF1Q8N6C5 1336 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 KCNA4P22459 653 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms