RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 RIPOR2Q9Y4F9 1068 aa12.44□□□□□ -0.42
COL8A1-206ENST00000474648 TNRC6CQ9HCJ0 1690 aaKnown RBP12.44□□□□□ -0.42
COL8A1-206ENST00000474648 EYA2O00167 538 aa12.43□□□□□ -0.42
COL8A1-206ENST00000474648 LRRC24Q50LG9 513 aa12.43□□□□□ -0.42
COL8A1-206ENST00000474648 RPGRQ92834 1020 aaKnown RBP12.43□□□□□ -0.42
COL8A1-206ENST00000474648 CDC5LQ99459 802 aaKnown RBP12.43□□□□□ -0.42
COL8A1-206ENST00000474648 EXOC6BQ9Y2D4 811 aa12.43□□□□□ -0.42
COL8A1-206ENST00000474648 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
COL8A1-206ENST00000474648 COL4A1P02462 1669 aa12.42□□□□□ -0.42
COL8A1-206ENST00000474648 BBOX1O75936 387 aa12.42□□□□□ -0.42
COL8A1-206ENST00000474648 CIAO1O76071 339 aa12.42□□□□□ -0.42
COL8A1-206ENST00000474648 SASH1O94885 1247 aa12.42□□□□□ -0.42
COL8A1-206ENST00000474648 IGHMBP2P38935 993 aaKnown RBP12.42□□□□□ -0.42
COL8A1-206ENST00000474648 LDHAL6AQ6ZMR3 332 aa12.42□□□□□ -0.42
COL8A1-206ENST00000474648 SLC51AQ86UW1 340 aa12.42□□□□□ -0.42
COL8A1-206ENST00000474648 ANKRD18AQ8IVF6 992 aa12.42□□□□□ -0.42
COL8A1-206ENST00000474648 ZNF622Q969S3 477 aaKnown RBP eCLIP12.42□□□□□ -0.42
COL8A1-206ENST00000474648 SIL1Q9H173 461 aa12.42□□□□□ -0.42
COL8A1-206ENST00000474648 BSDC1Q9NW68 430 aaPredicted RBP12.42□□□□□ -0.42
COL8A1-206ENST00000474648 FBXO3Q9UK99 471 aa12.42□□□□□ -0.42
COL8A1-206ENST00000474648 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.42□□□□□ -0.42
COL8A1-206ENST00000474648 RAB11FIP3O75154 756 aa12.41□□□□□ -0.42
COL8A1-206ENST00000474648 ALDH1B1P30837 517 aa12.41□□□□□ -0.42
COL8A1-206ENST00000474648 G3BP1Q13283 466 aaKnown RBP eCLIP12.41□□□□□ -0.42
COL8A1-206ENST00000474648 TAF7LQ5H9L4 462 aa12.41□□□□□ -0.42
COL8A1-206ENST00000474648 ANKRD31Q8N7Z5 1873 aa12.41□□□□□ -0.42
COL8A1-206ENST00000474648 C7orf43Q8WVR3 580 aa12.41□□□□□ -0.42
COL8A1-206ENST00000474648 GCC1Q96CN9 775 aa12.41□□□□□ -0.42
COL8A1-206ENST00000474648 PPP1R1BQ9UD71 204 aaPredicted RBP12.41□□□□□ -0.42
COL8A1-206ENST00000474648 HAX1O00165 279 aa12.4□□□□□ -0.42
COL8A1-206ENST00000474648 IL15P40933 162 aaPredicted RBP12.4□□□□□ -0.42
COL8A1-206ENST00000474648 HSP90AB4PQ58FF6 505 aa12.4□□□□□ -0.42
COL8A1-206ENST00000474648 CENPQQ7L2Z9 268 aaPredicted RBP12.4□□□□□ -0.42
COL8A1-206ENST00000474648 NLGN2Q8NFZ4 835 aa12.4□□□□□ -0.42
COL8A1-206ENST00000474648 CNKSR1Q969H4 720 aa12.4□□□□□ -0.42
COL8A1-206ENST00000474648 MPHOSPH8Q99549 860 aa12.4□□□□□ -0.42
COL8A1-206ENST00000474648 FHDC1Q9C0D6 1143 aaPredicted RBP12.4□□□□□ -0.42
COL8A1-206ENST00000474648 CNNM1Q9NRU3 951 aa12.4□□□□□ -0.42
COL8A1-206ENST00000474648 MINPP1Q9UNW1 487 aa12.4□□□□□ -0.42
COL8A1-206ENST00000474648 LAMB2P55268 1798 aa12.4□□□□□ -0.42
COL8A1-206ENST00000474648 TFCP2Q12800 502 aa12.39□□□□□ -0.43
COL8A1-206ENST00000474648 SP8Q8IXZ3 490 aa12.39□□□□□ -0.43
COL8A1-206ENST00000474648 KLHL34Q8N239 644 aa12.39□□□□□ -0.43
COL8A1-206ENST00000474648 TTLL6Q8N841 843 aa12.39□□□□□ -0.43
COL8A1-206ENST00000474648 VGLL2Q8N8G2 317 aa12.39□□□□□ -0.43
COL8A1-206ENST00000474648 RHPN1Q8TCX5 695 aa12.39□□□□□ -0.43
COL8A1-206ENST00000474648 APBB1O00213 710 aa12.38□□□□□ -0.43
COL8A1-206ENST00000474648 PPEF1O14829 653 aaPredicted RBP12.38□□□□□ -0.43
COL8A1-206ENST00000474648 SMARCA5O60264 1052 aaPredicted RBP12.38□□□□□ -0.43
COL8A1-206ENST00000474648 MNX1P50219 401 aaPredicted RBP12.38□□□□□ -0.43
COL8A1-206ENST00000474648 NUCB1Q02818 461 aa12.38□□□□□ -0.43
COL8A1-206ENST00000474648 CHRNDQ07001 517 aa12.38□□□□□ -0.43
COL8A1-206ENST00000474648 ANKRD45Q5TZF3 282 aa12.38□□□□□ -0.43
COL8A1-206ENST00000474648 PRPF40BQ6NWY9 871 aaKnown RBP12.38□□□□□ -0.43
COL8A1-206ENST00000474648 TMC4Q7Z404 712 aa12.38□□□□□ -0.43
COL8A1-206ENST00000474648 ERC1Q8IUD2 1116 aa12.38□□□□□ -0.43
COL8A1-206ENST00000474648 HELBQ8NG08 1087 aaPredicted RBP12.38□□□□□ -0.43
COL8A1-206ENST00000474648 SYT17Q9BSW7 474 aa12.38□□□□□ -0.43
COL8A1-206ENST00000474648 PIM2Q9P1W9 311 aa12.38□□□□□ -0.43
COL8A1-206ENST00000474648 ATP6V0A2Q9Y487 856 aa12.38□□□□□ -0.43
COL8A1-206ENST00000474648 MROH5Q6ZUA9 1318 aa12.37□□□□□ -0.43
COL8A1-206ENST00000474648 WTIPA6NIX2 430 aaPredicted RBP12.37□□□□□ -0.43
COL8A1-206ENST00000474648 TAF5LO75529 589 aa12.37□□□□□ -0.43
COL8A1-206ENST00000474648 OS9Q13438 667 aaPredicted RBP12.37□□□□□ -0.43
COL8A1-206ENST00000474648 METTL24Q5JXM2 366 aa12.37□□□□□ -0.43
COL8A1-206ENST00000474648 OLFM4Q6UX06 510 aa12.37□□□□□ -0.43
COL8A1-206ENST00000474648 KIF1BPQ96EK5 621 aa12.37□□□□□ -0.43
COL8A1-206ENST00000474648 LRRCC1Q9C099 1032 aa12.37□□□□□ -0.43
COL8A1-206ENST00000474648 CEP126Q9P2H0 1117 aa12.37□□□□□ -0.43
COL8A1-206ENST00000474648 SNAP23O00161 211 aa12.36□□□□□ -0.43
COL8A1-206ENST00000474648 PDE8BO95263 885 aa12.36□□□□□ -0.43
COL8A1-206ENST00000474648 FGFR2P21802 821 aa12.36□□□□□ -0.43
COL8A1-206ENST00000474648 GPSM2P81274 684 aa12.36□□□□□ -0.43
COL8A1-206ENST00000474648 C16orf71Q8IYS4 520 aaPredicted RBP12.36□□□□□ -0.43
COL8A1-206ENST00000474648 EAF2Q96CJ1 260 aaPredicted RBP12.36□□□□□ -0.43
COL8A1-206ENST00000474648 ANKRD2Q9GZV1 360 aa12.36□□□□□ -0.43
COL8A1-206ENST00000474648 IL1RAPL2Q9NP60 686 aa12.36□□□□□ -0.43
COL8A1-206ENST00000474648 GPR108Q9NPR9 543 aa12.36□□□□□ -0.43
COL8A1-206ENST00000474648 KIF13BQ9NQT8 1826 aa12.36□□□□□ -0.43
COL8A1-206ENST00000474648 MYH3P11055 1940 aa12.35□□□□□ -0.43
COL8A1-206ENST00000474648 COL11A2P13942 1736 aaPredicted RBP12.35□□□□□ -0.43
COL8A1-206ENST00000474648 TIMM10P62072 90 aa12.35□□□□□ -0.43
COL8A1-206ENST00000474648 DALRD3Q5D0E6 543 aaKnown RBP12.35□□□□□ -0.43
COL8A1-206ENST00000474648 CHD1LQ86WJ1 897 aa12.35□□□□□ -0.43
COL8A1-206ENST00000474648 PODXL2Q9NZ53 605 aa12.35□□□□□ -0.43
COL8A1-206ENST00000474648 LRP5O75197 1615 aa12.35□□□□□ -0.43
COL8A1-206ENST00000474648 KIAA1551Q9HCM1 1747 aa12.34□□□□□ -0.43
COL8A1-206ENST00000474648 TAF1P21675 1872 aa12.34□□□□□ -0.43
COL8A1-206ENST00000474648 C21orf2O43822 256 aa12.34□□□□□ -0.43
COL8A1-206ENST00000474648 PDE4AP27815 886 aa12.34□□□□□ -0.43
COL8A1-206ENST00000474648 EVX2Q03828 476 aa12.34□□□□□ -0.43
COL8A1-206ENST00000474648 TNNI3KQ59H18 835 aa12.34□□□□□ -0.43
COL8A1-206ENST00000474648 CC2D2BQ6DHV5 1058 aa12.34□□□□□ -0.43
COL8A1-206ENST00000474648 SKAP1Q86WV1 359 aa12.34□□□□□ -0.43
COL8A1-206ENST00000474648 OTUD7AQ8TE49 926 aaPredicted RBP12.34□□□□□ -0.43
COL8A1-206ENST00000474648 LNPKQ9C0E8 428 aa12.34□□□□□ -0.43
COL8A1-206ENST00000474648 WWC3Q9ULE0 1092 aa12.34□□□□□ -0.43
COL8A1-206ENST00000474648 FPGT-TNNI3KV9GXZ4 949 aa12.34□□□□□ -0.43
COL8A1-206ENST00000474648 UBE4AQ14139 1066 aa12.33□□□□□ -0.44
COL8A1-206ENST00000474648 CLASRPQ8N2M8 674 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms