RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 IL1RAPL2Q9NP60 686 aa12.69□□□□□ -0.38
COL12A1-206ENST00000474564 ANKIB1Q9P2G1 1089 aa12.69□□□□□ -0.38
COL12A1-206ENST00000474564 CD2APQ9Y5K6 639 aa12.69□□□□□ -0.38
COL12A1-206ENST00000474564 EP400Q96L91 3159 aa12.68□□□□□ -0.38
COL12A1-206ENST00000474564 SOCS7O14512 581 aa12.68□□□□□ -0.38
COL12A1-206ENST00000474564 PDE8BO95263 885 aa12.68□□□□□ -0.38
COL12A1-206ENST00000474564 SLC5A1P13866 664 aa12.68□□□□□ -0.38
COL12A1-206ENST00000474564 PUM3Q15397 648 aaKnown RBP12.68□□□□□ -0.38
COL12A1-206ENST00000474564 LRRC24Q50LG9 513 aa12.68□□□□□ -0.38
COL12A1-206ENST00000474564 CCDC158Q5M9N0 1113 aa12.68□□□□□ -0.38
COL12A1-206ENST00000474564 CC2D2BQ6DHV5 1058 aa12.68□□□□□ -0.38
COL12A1-206ENST00000474564 RIPOR2Q9Y4F9 1068 aa12.68□□□□□ -0.38
COL12A1-206ENST00000474564 LAMB2P55268 1798 aa12.67□□□□□ -0.38
COL12A1-206ENST00000474564 MYH3P11055 1940 aa12.67□□□□□ -0.38
COL12A1-206ENST00000474564 PPEF1O14829 653 aaPredicted RBP12.67□□□□□ -0.38
COL12A1-206ENST00000474564 SMARCA5O60264 1052 aaPredicted RBP12.67□□□□□ -0.38
COL12A1-206ENST00000474564 SASH1O94885 1247 aa12.67□□□□□ -0.38
COL12A1-206ENST00000474564 ATP2B3Q16720 1220 aa12.67□□□□□ -0.38
COL12A1-206ENST00000474564 TNNI3KQ59H18 835 aa12.67□□□□□ -0.38
COL12A1-206ENST00000474564 SOGA3Q5TF21 947 aa12.67□□□□□ -0.38
COL12A1-206ENST00000474564 C3orf67Q6ZVT6 689 aa12.67□□□□□ -0.38
COL12A1-206ENST00000474564 ATG9AQ7Z3C6 839 aa12.67□□□□□ -0.38
COL12A1-206ENST00000474564 SP8Q8IXZ3 490 aa12.67□□□□□ -0.38
COL12A1-206ENST00000474564 LPIN2Q92539 896 aa12.67□□□□□ -0.38
COL12A1-206ENST00000474564 CELF1Q92879 486 aaKnown RBP12.67□□□□□ -0.38
COL12A1-206ENST00000474564 PUS3Q9BZE2 481 aaKnown RBP12.67□□□□□ -0.38
COL12A1-206ENST00000474564 FPGT-TNNI3KV9GXZ4 949 aa12.67□□□□□ -0.38
COL12A1-206ENST00000474564 EIF5BO60841 1220 aaKnown RBP12.66□□□□□ -0.38
COL12A1-206ENST00000474564 MX1P20591 662 aa12.66□□□□□ -0.38
COL12A1-206ENST00000474564 CHRNDQ07001 517 aa12.66□□□□□ -0.38
COL12A1-206ENST00000474564 UBE4AQ14139 1066 aa12.66□□□□□ -0.38
COL12A1-206ENST00000474564 CAVIN4Q5BKX8 364 aa12.66□□□□□ -0.38
COL12A1-206ENST00000474564 VPS37DQ86XT2 251 aa12.66□□□□□ -0.38
COL12A1-206ENST00000474564 TTLL6Q8N841 843 aa12.66□□□□□ -0.38
COL12A1-206ENST00000474564 GNL3LQ9NVN8 582 aaKnown RBP12.66□□□□□ -0.38
COL12A1-206ENST00000474564 PIM2Q9P1W9 311 aa12.66□□□□□ -0.38
COL12A1-206ENST00000474564 MINPP1Q9UNW1 487 aa12.66□□□□□ -0.38
COL12A1-206ENST00000474564 LEMD3Q9Y2U8 911 aa12.66□□□□□ -0.38
COL12A1-206ENST00000474564 DDX60Q8IY21 1712 aaKnown RBP12.65□□□□□ -0.38
COL12A1-206ENST00000474564 TTC41PQ6P2S7 1318 aa12.65□□□□□ -0.38
COL12A1-206ENST00000474564 G3V3G9 751 aa12.65□□□□□ -0.38
COL12A1-206ENST00000474564 ATP2B4P23634 1241 aa12.65□□□□□ -0.38
COL12A1-206ENST00000474564 DCAF8Q5TAQ9 597 aa12.65□□□□□ -0.38
COL12A1-206ENST00000474564 ECHDC1Q9NTX5 307 aa12.65□□□□□ -0.38
COL12A1-206ENST00000474564 NSFL1CQ9UNZ2 370 aaKnown RBP12.65□□□□□ -0.38
COL12A1-206ENST00000474564 ATP6V0A2Q9Y487 856 aa12.65□□□□□ -0.38
COL12A1-206ENST00000474564 XDHP47989 1333 aa12.64□□□□□ -0.39
COL12A1-206ENST00000474564 AOX1Q06278 1338 aa12.64□□□□□ -0.39
COL12A1-206ENST00000474564 A0A1B0GUL7 405 aa12.64□□□□□ -0.39
COL12A1-206ENST00000474564 GLRX3O76003 335 aaKnown RBP12.64□□□□□ -0.39
COL12A1-206ENST00000474564 TTC39AQ5SRH9 613 aa12.64□□□□□ -0.39
COL12A1-206ENST00000474564 SUPT20HQ8NEM7 779 aa12.64□□□□□ -0.39
COL12A1-206ENST00000474564 HELBQ8NG08 1087 aaPredicted RBP12.64□□□□□ -0.39
COL12A1-206ENST00000474564 CCDC8Q9H0W5 538 aaPredicted RBP12.64□□□□□ -0.39
COL12A1-206ENST00000474564 GGA1Q9UJY5 639 aa12.64□□□□□ -0.39
COL12A1-206ENST00000474564 NRXN2Q9P2S2 1712 aa12.64□□□□□ -0.39
COL12A1-206ENST00000474564 C10orf71Q711Q0 1435 aa12.63□□□□□ -0.39
COL12A1-206ENST00000474564 UQCRFS1P1P0C7P4 283 aa12.63□□□□□ -0.39
COL12A1-206ENST00000474564 CHRNA5P30532 468 aa12.63□□□□□ -0.39
COL12A1-206ENST00000474564 PDE1AP54750 535 aa12.63□□□□□ -0.39
COL12A1-206ENST00000474564 TIMM10P62072 90 aa12.63□□□□□ -0.39
COL12A1-206ENST00000474564 LRRFIP1Q32MZ4 808 aaKnown RBP12.63□□□□□ -0.39
COL12A1-206ENST00000474564 DALRD3Q5D0E6 543 aaKnown RBP12.63□□□□□ -0.39
COL12A1-206ENST00000474564 CASC1Q6TDU7 716 aa12.63□□□□□ -0.39
COL12A1-206ENST00000474564 DPP8Q6V1X1 898 aaPredicted RBP12.63□□□□□ -0.39
COL12A1-206ENST00000474564 RTKN2Q8IZC4 609 aa12.63□□□□□ -0.39
COL12A1-206ENST00000474564 MPNDQ8N594 471 aa12.63□□□□□ -0.39
COL12A1-206ENST00000474564 EAF2Q96CJ1 260 aaPredicted RBP12.63□□□□□ -0.39
COL12A1-206ENST00000474564 EYA3Q99504 573 aa12.63□□□□□ -0.39
COL12A1-206ENST00000474564 CASZ1Q86V15 1759 aa12.62□□□□□ -0.39
COL12A1-206ENST00000474564 A0A0G2JLW4 131 aa12.62□□□□□ -0.39
COL12A1-206ENST00000474564 C6orf229H3BNL8 230 aa12.62□□□□□ -0.39
COL12A1-206ENST00000474564 FRAT2O75474 233 aaPredicted RBP12.62□□□□□ -0.39
COL12A1-206ENST00000474564 TAF5LO75529 589 aa12.62□□□□□ -0.39
COL12A1-206ENST00000474564 DPEP1P16444 411 aa12.62□□□□□ -0.39
COL12A1-206ENST00000474564 PTGER2P43116 358 aa12.62□□□□□ -0.39
COL12A1-206ENST00000474564 PRPF40BQ6NWY9 871 aaKnown RBP12.62□□□□□ -0.39
COL12A1-206ENST00000474564 PLEKHM2Q8IWE5 1019 aa12.62□□□□□ -0.39
COL12A1-206ENST00000474564 C16orf71Q8IYS4 520 aaPredicted RBP12.62□□□□□ -0.39
COL12A1-206ENST00000474564 OSBPL3Q9H4L5 887 aa12.62□□□□□ -0.39
COL12A1-206ENST00000474564 STAP2Q9UGK3 403 aa12.62□□□□□ -0.39
COL12A1-206ENST00000474564 ZNF804BA4D1E1 1349 aa12.62□□□□□ -0.39
COL12A1-206ENST00000474564 TRIM6-TRIM34B2RNG4 842 aa12.61□□□□□ -0.39
COL12A1-206ENST00000474564 ZNF804AQ7Z570 1209 aa12.61□□□□□ -0.39
COL12A1-206ENST00000474564 XAGE2Q96GT9 111 aa12.61□□□□□ -0.39
COL12A1-206ENST00000474564 ZC3H12CQ9C0D7 883 aaKnown RBP12.61□□□□□ -0.39
COL12A1-206ENST00000474564 UFL1O94874 794 aa12.6□□□□□ -0.39
COL12A1-206ENST00000474564 ATP5JP18859 108 aa12.6□□□□□ -0.39
COL12A1-206ENST00000474564 CCDC93Q567U6 631 aa12.6□□□□□ -0.39
COL12A1-206ENST00000474564 CNTROBQ8N137 903 aa12.6□□□□□ -0.39
COL12A1-206ENST00000474564 VGLL2Q8N8G2 317 aa12.6□□□□□ -0.39
COL12A1-206ENST00000474564 SGIP1Q9BQI5 828 aa12.6□□□□□ -0.39
COL12A1-206ENST00000474564 PODXL2Q9NZ53 605 aa12.6□□□□□ -0.39
COL12A1-206ENST00000474564 PDE4AP27815 886 aa12.59□□□□□ -0.39
COL12A1-206ENST00000474564 HIBADHP31937 336 aaKnown RBP12.59□□□□□ -0.39
COL12A1-206ENST00000474564 GPSM2P81274 684 aa12.59□□□□□ -0.39
COL12A1-206ENST00000474564 BMP2KLQ5H9B9 411 aa12.59□□□□□ -0.39
COL12A1-206ENST00000474564 TTC22Q5TAA0 569 aa12.59□□□□□ -0.39
COL12A1-206ENST00000474564 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.59□□□□□ -0.39
COL12A1-206ENST00000474564 DBNDD2Q9BQY9 259 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms