RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 CELF1Q92879 486 aaKnown RBP10.3□□□□□ -0.76
CNN3-205ENST00000474409 ZNF622Q969S3 477 aaKnown RBP eCLIP10.3□□□□□ -0.76
CNN3-205ENST00000474409 KIF1BPQ96EK5 621 aa10.3□□□□□ -0.76
CNN3-205ENST00000474409 MASTLQ96GX5 879 aa10.3□□□□□ -0.76
CNN3-205ENST00000474409 SGIP1Q9BQI5 828 aa10.3□□□□□ -0.76
CNN3-205ENST00000474409 LRRCC1Q9C099 1032 aa10.3□□□□□ -0.76
CNN3-205ENST00000474409 FBXO3Q9UK99 471 aa10.3□□□□□ -0.76
CNN3-205ENST00000474409 ZNF646O15015 1829 aaPredicted RBP10.3□□□□□ -0.76
CNN3-205ENST00000474409 KLRG2A4D1S0 409 aaPredicted RBP10.29□□□□□ -0.76
CNN3-205ENST00000474409 PPEF1O14829 653 aaPredicted RBP10.29□□□□□ -0.76
CNN3-205ENST00000474409 SRGNP10124 158 aa10.29□□□□□ -0.76
CNN3-205ENST00000474409 LRRC24Q50LG9 513 aa10.29□□□□□ -0.76
CNN3-205ENST00000474409 METTL24Q5JXM2 366 aa10.29□□□□□ -0.76
CNN3-205ENST00000474409 ANKRD45Q5TZF3 282 aa10.29□□□□□ -0.76
CNN3-205ENST00000474409 RHPN1Q8TCX5 695 aa10.29□□□□□ -0.76
CNN3-205ENST00000474409 NOP58Q9Y2X3 529 aaKnown RBP10.29□□□□□ -0.76
CNN3-205ENST00000474409 DUOX1Q9NRD9 1551 aa10.29□□□□□ -0.76
CNN3-205ENST00000474409 MROH5Q6ZUA9 1318 aa10.29□□□□□ -0.76
CNN3-205ENST00000474409 SMARCA5O60264 1052 aaPredicted RBP10.28□□□□□ -0.76
CNN3-205ENST00000474409 CHRNA5P30532 468 aa10.28□□□□□ -0.76
CNN3-205ENST00000474409 ALDH1B1P30837 517 aa10.28□□□□□ -0.76
CNN3-205ENST00000474409 HOXA10P31260 410 aaPredicted RBP10.28□□□□□ -0.76
CNN3-205ENST00000474409 RPS8P62241 208 aaKnown RBP10.28□□□□□ -0.76
CNN3-205ENST00000474409 STYK1Q6J9G0 422 aa10.28□□□□□ -0.76
CNN3-205ENST00000474409 TMC4Q7Z404 712 aa10.28□□□□□ -0.76
CNN3-205ENST00000474409 CRAMP1Q96RY5 1269 aa10.28□□□□□ -0.76
CNN3-205ENST00000474409 PUS3Q9BZE2 481 aaKnown RBP10.28□□□□□ -0.76
CNN3-205ENST00000474409 LNPKQ9C0E8 428 aa10.28□□□□□ -0.76
CNN3-205ENST00000474409 IL1RAPL2Q9NP60 686 aa10.28□□□□□ -0.76
CNN3-205ENST00000474409 MYH2Q9UKX2 1941 aa10.27□□□□□ -0.76
CNN3-205ENST00000474409 SCN9AQ15858 1988 aa10.27□□□□□ -0.77
CNN3-205ENST00000474409 TGFB2P61812 414 aa10.27□□□□□ -0.77
CNN3-205ENST00000474409 NUCB1Q02818 461 aa10.27□□□□□ -0.77
CNN3-205ENST00000474409 ATG9AQ7Z3C6 839 aa10.27□□□□□ -0.77
CNN3-205ENST00000474409 CHD1LQ86WJ1 897 aa10.27□□□□□ -0.77
CNN3-205ENST00000474409 CLASRPQ8N2M8 674 aaKnown RBP10.27□□□□□ -0.77
CNN3-205ENST00000474409 CNKSR1Q969H4 720 aa10.27□□□□□ -0.77
CNN3-205ENST00000474409 TMX4Q9H1E5 349 aaPredicted RBP10.27□□□□□ -0.77
CNN3-205ENST00000474409 BSDC1Q9NW68 430 aaPredicted RBP10.27□□□□□ -0.77
CNN3-205ENST00000474409 CEP126Q9P2H0 1117 aa10.27□□□□□ -0.77
CNN3-205ENST00000474409 CD2APQ9Y5K6 639 aa10.27□□□□□ -0.77
CNN3-205ENST00000474409 ECM29Q5VYK3 1845 aa10.26□□□□□ -0.77
CNN3-205ENST00000474409 CDK5RAP2Q96SN8 1893 aa10.26□□□□□ -0.77
CNN3-205ENST00000474409 SASH1O94885 1247 aa10.26□□□□□ -0.77
CNN3-205ENST00000474409 DPEP1P16444 411 aa10.26□□□□□ -0.77
CNN3-205ENST00000474409 KCNJ4P48050 445 aa10.26□□□□□ -0.77
CNN3-205ENST00000474409 CHRNDQ07001 517 aa10.26□□□□□ -0.77
CNN3-205ENST00000474409 TFCP2Q12800 502 aa10.26□□□□□ -0.77
CNN3-205ENST00000474409 PRPF40BQ6NWY9 871 aaKnown RBP10.26□□□□□ -0.77
CNN3-205ENST00000474409 AACSQ86V21 672 aa10.26□□□□□ -0.77
CNN3-205ENST00000474409 RIPOR2Q9Y4F9 1068 aa10.26□□□□□ -0.77
CNN3-205ENST00000474409 A0A0G2JLW4 131 aa10.25□□□□□ -0.77
CNN3-205ENST00000474409 BBOX1O75936 387 aa10.25□□□□□ -0.77
CNN3-205ENST00000474409 IFIT2P09913 472 aaKnown RBP10.25□□□□□ -0.77
CNN3-205ENST00000474409 RGS3P49796 1198 aa10.25□□□□□ -0.77
CNN3-205ENST00000474409 PUM3Q15397 648 aaKnown RBP10.25□□□□□ -0.77
CNN3-205ENST00000474409 ATP2B3Q16720 1220 aa10.25□□□□□ -0.77
CNN3-205ENST00000474409 TNNI3KQ59H18 835 aa10.25□□□□□ -0.77
CNN3-205ENST00000474409 ANKRD2Q9GZV1 360 aa10.25□□□□□ -0.77
CNN3-205ENST00000474409 ANKIB1Q9P2G1 1089 aa10.25□□□□□ -0.77
CNN3-205ENST00000474409 AKAP2Q9Y2D5 859 aa10.25□□□□□ -0.77
CNN3-205ENST00000474409 FPGT-TNNI3KV9GXZ4 949 aa10.25□□□□□ -0.77
CNN3-205ENST00000474409 XDHP47989 1333 aa10.25□□□□□ -0.77
CNN3-205ENST00000474409 A0A1B0GUL7 405 aa10.24□□□□□ -0.77
CNN3-205ENST00000474409 TAF5LO75529 589 aa10.24□□□□□ -0.77
CNN3-205ENST00000474409 PDE8BO95263 885 aa10.24□□□□□ -0.77
CNN3-205ENST00000474409 SLC5A1P13866 664 aa10.24□□□□□ -0.77
CNN3-205ENST00000474409 TTLL6Q8N841 843 aa10.24□□□□□ -0.77
CNN3-205ENST00000474409 VGLL2Q8N8G2 317 aa10.24□□□□□ -0.77
CNN3-205ENST00000474409 HELBQ8NG08 1087 aaPredicted RBP10.24□□□□□ -0.77
CNN3-205ENST00000474409 GPATCH3Q96I76 525 aa10.24□□□□□ -0.77
CNN3-205ENST00000474409 NEUROD6Q96NK8 337 aa10.24□□□□□ -0.77
CNN3-205ENST00000474409 PIM2Q9P1W9 311 aa10.24□□□□□ -0.77
CNN3-205ENST00000474409 ZNF219Q9P2Y4 722 aaPredicted RBP10.24□□□□□ -0.77
CNN3-205ENST00000474409 WWC3Q9ULE0 1092 aa10.24□□□□□ -0.77
CNN3-205ENST00000474409 MINPP1Q9UNW1 487 aa10.24□□□□□ -0.77
CNN3-205ENST00000474409 ATP6V0A2Q9Y487 856 aa10.24□□□□□ -0.77
CNN3-205ENST00000474409 MYH8P13535 1937 aa10.23□□□□□ -0.77
CNN3-205ENST00000474409 MX1P20591 662 aa10.23□□□□□ -0.77
CNN3-205ENST00000474409 SKAP1Q86WV1 359 aa10.23□□□□□ -0.77
CNN3-205ENST00000474409 SP8Q8IXZ3 490 aa10.23□□□□□ -0.77
CNN3-205ENST00000474409 NLGN2Q8NFZ4 835 aa10.23□□□□□ -0.77
CNN3-205ENST00000474409 FHDC1Q9C0D6 1143 aaPredicted RBP10.23□□□□□ -0.77
CNN3-205ENST00000474409 GPR108Q9NPR9 543 aa10.23□□□□□ -0.77
CNN3-205ENST00000474409 NSFL1CQ9UNZ2 370 aaKnown RBP10.23□□□□□ -0.77
CNN3-205ENST00000474409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.23□□□□□ -0.77
CNN3-205ENST00000474409 ADAMTSL1Q8N6G6 1762 aa10.23□□□□□ -0.77
CNN3-205ENST00000474409 FOCADQ5VW36 1801 aa10.23□□□□□ -0.77
CNN3-205ENST00000474409 UFL1O94874 794 aa10.22□□□□□ -0.77
CNN3-205ENST00000474409 IFIT1P09914 478 aaKnown RBP10.22□□□□□ -0.77
CNN3-205ENST00000474409 PDE4AP27815 886 aa10.22□□□□□ -0.77
CNN3-205ENST00000474409 DALRD3Q5D0E6 543 aaKnown RBP10.22□□□□□ -0.77
CNN3-205ENST00000474409 GORABQ5T7V8 394 aa10.22□□□□□ -0.77
CNN3-205ENST00000474409 SLC51AQ86UW1 340 aa10.22□□□□□ -0.77
CNN3-205ENST00000474409 LPIN2Q92539 896 aa10.22□□□□□ -0.77
CNN3-205ENST00000474409 EAF2Q96CJ1 260 aaPredicted RBP10.22□□□□□ -0.77
CNN3-205ENST00000474409 CCDC8Q9H0W5 538 aaPredicted RBP10.22□□□□□ -0.77
CNN3-205ENST00000474409 TLR7Q9NYK1 1049 aaKnown RBP10.22□□□□□ -0.77
CNN3-205ENST00000474409 GGA1Q9UJY5 639 aa10.22□□□□□ -0.77
CNN3-205ENST00000474409 ZNF804BA4D1E1 1349 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms