RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 RTFDC1Q9BY42 306 aaPredicted RBP13.61□□□□□ -0.23
RNF220-210ENST00000474394 VPS33BQ9H267 617 aa13.61□□□□□ -0.23
RNF220-210ENST00000474394 WDR33Q9C0J8 1336 aaKnown RBP13.61□□□□□ -0.23
RNF220-210ENST00000474394 RTL9Q8NET4 1388 aa13.6□□□□□ -0.23
RNF220-210ENST00000474394 IQCA1LA6NCM1 817 aa13.6□□□□□ -0.23
RNF220-210ENST00000474394 RASSF10A6NK89 507 aa13.6□□□□□ -0.23
RNF220-210ENST00000474394 ITGBL1O95965 494 aaPredicted RBP13.6□□□□□ -0.23
RNF220-210ENST00000474394 LARGE2Q8N3Y3 721 aa13.6□□□□□ -0.23
RNF220-210ENST00000474394 GREM2Q9H772 168 aa13.6□□□□□ -0.23
RNF220-210ENST00000474394 NOB1Q9ULX3 412 aaKnown RBP13.6□□□□□ -0.23
RNF220-210ENST00000474394 KIF16BQ96L93 1317 aa13.6□□□□□ -0.23
RNF220-210ENST00000474394 SCN4AP35499 1836 aa13.6□□□□□ -0.23
RNF220-210ENST00000474394 PPIP5K2O43314 1243 aa13.59□□□□□ -0.23
RNF220-210ENST00000474394 CSF1RP07333 972 aa13.59□□□□□ -0.23
RNF220-210ENST00000474394 API5Q9BZZ5 524 aaKnown RBP13.59□□□□□ -0.23
RNF220-210ENST00000474394 NSFL1CQ9UNZ2 370 aaKnown RBP13.59□□□□□ -0.23
RNF220-210ENST00000474394 LRRC37AA6NMS7 1700 aa13.59□□□□□ -0.23
RNF220-210ENST00000474394 FZD9O00144 591 aa13.58□□□□□ -0.24
RNF220-210ENST00000474394 ITGA6P23229 1130 aa13.58□□□□□ -0.24
RNF220-210ENST00000474394 GPSM2P81274 684 aa13.58□□□□□ -0.24
RNF220-210ENST00000474394 AOC3Q16853 763 aa13.58□□□□□ -0.24
RNF220-210ENST00000474394 NIM1KQ8IY84 436 aa13.58□□□□□ -0.24
RNF220-210ENST00000474394 BEGAINQ9BUH8 593 aa13.58□□□□□ -0.24
RNF220-210ENST00000474394 PDE4DIPQ5VU43 2346 aa13.57□□□□□ -0.24
RNF220-210ENST00000474394 COL4A1P02462 1669 aa13.57□□□□□ -0.24
RNF220-210ENST00000474394 ANKRD18BA2A2Z9 1011 aa13.57□□□□□ -0.24
RNF220-210ENST00000474394 C6orf229H3BNL8 230 aa13.57□□□□□ -0.24
RNF220-210ENST00000474394 IPO8O15397 1037 aaKnown RBP13.57□□□□□ -0.24
RNF220-210ENST00000474394 IGHMBP2P38935 993 aaKnown RBP13.57□□□□□ -0.24
RNF220-210ENST00000474394 CCT4P50991 539 aaKnown RBP13.57□□□□□ -0.24
RNF220-210ENST00000474394 EIF6P56537 245 aaKnown RBP13.57□□□□□ -0.24
RNF220-210ENST00000474394 FOXO4P98177 505 aa13.57□□□□□ -0.24
RNF220-210ENST00000474394 KIAA2012Q0VF49 1180 aa13.57□□□□□ -0.24
RNF220-210ENST00000474394 ARHGAP45Q92619 1136 aa13.57□□□□□ -0.24
RNF220-210ENST00000474394 TAF1DQ9H5J8 278 aaPredicted RBP13.57□□□□□ -0.24
RNF220-210ENST00000474394 BSDC1Q9NW68 430 aaPredicted RBP13.57□□□□□ -0.24
RNF220-210ENST00000474394 ANKIB1Q9P2G1 1089 aa13.57□□□□□ -0.24
RNF220-210ENST00000474394 CHMP3Q9Y3E7 222 aa13.57□□□□□ -0.24
RNF220-210ENST00000474394 UTYO14607 1347 aa13.57□□□□□ -0.24
RNF220-210ENST00000474394 NBPF7P0C2Y1 421 aaPredicted RBP13.56□□□□□ -0.24
RNF220-210ENST00000474394 IFIT5Q13325 482 aaKnown RBP13.56□□□□□ -0.24
RNF220-210ENST00000474394 WASHC4Q2M389 1173 aa13.56□□□□□ -0.24
RNF220-210ENST00000474394 LMBR1LQ6UX01 489 aa13.56□□□□□ -0.24
RNF220-210ENST00000474394 EYA3Q99504 573 aa13.56□□□□□ -0.24
RNF220-210ENST00000474394 MPHOSPH8Q99549 860 aa13.56□□□□□ -0.24
RNF220-210ENST00000474394 PODXL2Q9NZ53 605 aa13.56□□□□□ -0.24
RNF220-210ENST00000474394 ZNF541Q9H0D2 1346 aa13.56□□□□□ -0.24
RNF220-210ENST00000474394 UFL1O94874 794 aa13.55□□□□□ -0.24
RNF220-210ENST00000474394 EAPPQ56P03 285 aaPredicted RBP13.55□□□□□ -0.24
RNF220-210ENST00000474394 EPHA10Q5JZY3 1008 aa13.55□□□□□ -0.24
RNF220-210ENST00000474394 TBC1D16Q8TBP0 767 aa13.55□□□□□ -0.24
RNF220-210ENST00000474394 SUCLG2Q96I99 432 aa13.55□□□□□ -0.24
RNF220-210ENST00000474394 L3MBTL3Q96JM7 780 aaPredicted RBP13.55□□□□□ -0.24
RNF220-210ENST00000474394 POLLQ9UGP5 575 aa13.55□□□□□ -0.24
RNF220-210ENST00000474394 GGA1Q9UJY5 639 aa13.55□□□□□ -0.24
RNF220-210ENST00000474394 ABT1Q9ULW3 272 aaKnown RBP13.55□□□□□ -0.24
RNF220-210ENST00000474394 CLEC11AQ9Y240 323 aa13.55□□□□□ -0.24
RNF220-210ENST00000474394 XDHP47989 1333 aa13.55□□□□□ -0.24
RNF220-210ENST00000474394 DUOX1Q9NRD9 1551 aa13.54□□□□□ -0.24
RNF220-210ENST00000474394 COL4A5P29400 1685 aa13.54□□□□□ -0.24
RNF220-210ENST00000474394 BCAR3O75815 825 aa13.54□□□□□ -0.24
RNF220-210ENST00000474394 ATP2B4P23634 1241 aa13.54□□□□□ -0.24
RNF220-210ENST00000474394 CCDC57Q2TAC2 916 aa13.54□□□□□ -0.24
RNF220-210ENST00000474394 GPC2Q8N158 579 aa13.54□□□□□ -0.24
RNF220-210ENST00000474394 FRAT1Q92837 279 aaPredicted RBP13.54□□□□□ -0.24
RNF220-210ENST00000474394 USP44Q9H0E7 712 aa13.54□□□□□ -0.24
RNF220-210ENST00000474394 ZNRF3Q9ULT6 936 aa13.54□□□□□ -0.24
RNF220-210ENST00000474394 MINPP1Q9UNW1 487 aa13.54□□□□□ -0.24
RNF220-210ENST00000474394 RIMBP2O15034 1052 aa13.53□□□□□ -0.24
RNF220-210ENST00000474394 TAF7LQ5H9L4 462 aa13.53□□□□□ -0.24
RNF220-210ENST00000474394 CNTROBQ8N137 903 aa13.53□□□□□ -0.24
RNF220-210ENST00000474394 ZC3H12CQ9C0D7 883 aaKnown RBP13.53□□□□□ -0.24
RNF220-210ENST00000474394 MCOLN1Q9GZU1 580 aa13.53□□□□□ -0.24
RNF220-210ENST00000474394 GJA3Q9Y6H8 435 aa13.53□□□□□ -0.24
RNF220-210ENST00000474394 G3V3G9 751 aa13.52□□□□□ -0.25
RNF220-210ENST00000474394 DCAF8Q5TAQ9 597 aa13.52□□□□□ -0.25
RNF220-210ENST00000474394 ATF7IPQ6VMQ6 1270 aa13.52□□□□□ -0.25
RNF220-210ENST00000474394 KAZALD1Q96I82 304 aa13.52□□□□□ -0.25
RNF220-210ENST00000474394 YTHDC1Q96MU7 727 aaKnown RBP13.52□□□□□ -0.25
RNF220-210ENST00000474394 ANKRD2Q9GZV1 360 aa13.52□□□□□ -0.25
RNF220-210ENST00000474394 BICC1Q9H694 974 aaKnown RBP13.52□□□□□ -0.25
RNF220-210ENST00000474394 HDAC5Q9UQL6 1122 aa13.52□□□□□ -0.25
RNF220-210ENST00000474394 LTBP1Q14766 1721 aa13.52□□□□□ -0.25
RNF220-210ENST00000474394 CASP8AP2Q9UKL3 1982 aa13.51□□□□□ -0.25
RNF220-210ENST00000474394 SPEF2Q9C093 1822 aa13.51□□□□□ -0.25
RNF220-210ENST00000474394 UBTFL1P0CB47 393 aaPredicted RBP13.51□□□□□ -0.25
RNF220-210ENST00000474394 TRIM27P14373 513 aa13.51□□□□□ -0.25
RNF220-210ENST00000474394 ECE1P42892 770 aa13.51□□□□□ -0.25
RNF220-210ENST00000474394 CXCL9Q07325 125 aa13.51□□□□□ -0.25
RNF220-210ENST00000474394 TNIP1Q15025 636 aa13.51□□□□□ -0.25
RNF220-210ENST00000474394 RABL6Q3YEC7 729 aaPredicted RBP13.51□□□□□ -0.25
RNF220-210ENST00000474394 ZKSCAN2Q63HK3 967 aa13.51□□□□□ -0.25
RNF220-210ENST00000474394 INTS3Q68E01 1043 aaKnown RBP13.51□□□□□ -0.25
RNF220-210ENST00000474394 CIAPIN1Q6FI81 312 aa13.51□□□□□ -0.25
RNF220-210ENST00000474394 PNMA8AQ86V59 439 aaPredicted RBP13.51□□□□□ -0.25
RNF220-210ENST00000474394 CAPNS2Q96L46 248 aa13.51□□□□□ -0.25
RNF220-210ENST00000474394 GPR101Q96P66 508 aaPredicted RBP13.51□□□□□ -0.25
RNF220-210ENST00000474394 DBNDD1Q9H9R9 158 aa13.51□□□□□ -0.25
RNF220-210ENST00000474394 HACL1Q9UJ83 578 aa13.51□□□□□ -0.25
RNF220-210ENST00000474394 LEMD3Q9Y2U8 911 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms