RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 HTRA3P83110 453 aa14.2□□□□□ -0.14
CKS1B-206ENST00000474215 SLC4A10Q6U841 1118 aa14.2□□□□□ -0.14
CKS1B-206ENST00000474215 MIER1Q8N108 512 aa14.2□□□□□ -0.14
CKS1B-206ENST00000474215 BSDC1Q9NW68 430 aaPredicted RBP14.2□□□□□ -0.14
CKS1B-206ENST00000474215 GGA1Q9UJY5 639 aa14.2□□□□□ -0.14
CKS1B-206ENST00000474215 YDJCA8MPS7 323 aa14.19□□□□□ -0.14
CKS1B-206ENST00000474215 GMPSP49915 693 aaPredicted RBP14.19□□□□□ -0.14
CKS1B-206ENST00000474215 DOK7Q18PE1 504 aa14.19□□□□□ -0.14
CKS1B-206ENST00000474215 SSH1Q8WYL5 1049 aa14.19□□□□□ -0.14
CKS1B-206ENST00000474215 GPR101Q96P66 508 aaPredicted RBP14.19□□□□□ -0.14
CKS1B-206ENST00000474215 SRCIN1Q9C0H9 1055 aa14.19□□□□□ -0.14
CKS1B-206ENST00000474215 DBNDD1Q9H9R9 158 aa14.19□□□□□ -0.14
CKS1B-206ENST00000474215 GPRC5DQ9NZD1 345 aa14.19□□□□□ -0.14
CKS1B-206ENST00000474215 MINPP1Q9UNW1 487 aa14.19□□□□□ -0.14
CKS1B-206ENST00000474215 XDHP47989 1333 aa14.18□□□□□ -0.14
CKS1B-206ENST00000474215 GRM8O00222 908 aa14.18□□□□□ -0.14
CKS1B-206ENST00000474215 ITGBL1O95965 494 aaPredicted RBP14.18□□□□□ -0.14
CKS1B-206ENST00000474215 ITGA6P23229 1130 aa14.18□□□□□ -0.14
CKS1B-206ENST00000474215 ATP2B4P23634 1241 aa14.18□□□□□ -0.14
CKS1B-206ENST00000474215 IGHMBP2P38935 993 aaKnown RBP14.18□□□□□ -0.14
CKS1B-206ENST00000474215 FOXO4P98177 505 aa14.18□□□□□ -0.14
CKS1B-206ENST00000474215 USP50Q70EL3 339 aaPredicted RBP14.18□□□□□ -0.14
CKS1B-206ENST00000474215 C9orf78Q9NZ63 289 aaPredicted RBP14.18□□□□□ -0.14
CKS1B-206ENST00000474215 G3V3G9 751 aa14.17□□□□□ -0.14
CKS1B-206ENST00000474215 ECE2O60344 883 aa14.17□□□□□ -0.14
CKS1B-206ENST00000474215 FAM161AQ3B820 660 aa14.17□□□□□ -0.14
CKS1B-206ENST00000474215 ALDH1L2Q3SY69 923 aa14.17□□□□□ -0.14
CKS1B-206ENST00000474215 DCAF8Q5TAQ9 597 aa14.17□□□□□ -0.14
CKS1B-206ENST00000474215 BCL2L13Q9BXK5 485 aa14.17□□□□□ -0.14
CKS1B-206ENST00000474215 ADARB2Q9NS39 739 aaKnown RBP14.17□□□□□ -0.14
CKS1B-206ENST00000474215 PTPRCP08575 1304 aa14.16□□□□□ -0.14
CKS1B-206ENST00000474215 ANKRD18BA2A2Z9 1011 aa14.16□□□□□ -0.14
CKS1B-206ENST00000474215 CT47B1P0C2W7 299 aaPredicted RBP14.16□□□□□ -0.14
CKS1B-206ENST00000474215 MAP1SQ66K74 1059 aaPredicted RBP14.16□□□□□ -0.14
CKS1B-206ENST00000474215 CNTROBQ8N137 903 aa14.16□□□□□ -0.14
CKS1B-206ENST00000474215 MPHOSPH8Q99549 860 aa14.16□□□□□ -0.14
CKS1B-206ENST00000474215 KCNQ5Q9NR82 932 aa14.16□□□□□ -0.14
CKS1B-206ENST00000474215 PASKQ96RG2 1323 aa14.15□□□□□ -0.14
CKS1B-206ENST00000474215 LTBP1Q14766 1721 aa14.15□□□□□ -0.14
CKS1B-206ENST00000474215 WTIPA6NIX2 430 aaPredicted RBP14.15□□□□□ -0.14
CKS1B-206ENST00000474215 PSMD14O00487 310 aa14.15□□□□□ -0.14
CKS1B-206ENST00000474215 CCT4P50991 539 aaKnown RBP14.15□□□□□ -0.14
CKS1B-206ENST00000474215 IFIT5Q13325 482 aaKnown RBP14.15□□□□□ -0.14
CKS1B-206ENST00000474215 EPHA10Q5JZY3 1008 aa14.15□□□□□ -0.14
CKS1B-206ENST00000474215 LMBR1LQ6UX01 489 aa14.15□□□□□ -0.14
CKS1B-206ENST00000474215 DPF2Q92785 391 aa14.15□□□□□ -0.14
CKS1B-206ENST00000474215 KLRG1Q96E93 195 aa14.15□□□□□ -0.14
CKS1B-206ENST00000474215 ANKRD2Q9GZV1 360 aa14.15□□□□□ -0.14
CKS1B-206ENST00000474215 CNOT7Q9UIV1 285 aaKnown RBP14.15□□□□□ -0.14
CKS1B-206ENST00000474215 H7C1D1 291 aa14.14□□□□□ -0.15
CKS1B-206ENST00000474215 RPS12P25398 132 aaKnown RBP14.14□□□□□ -0.15
CKS1B-206ENST00000474215 CREBZFQ9NS37 354 aa14.14□□□□□ -0.15
CKS1B-206ENST00000474215 SMC4Q9NTJ3 1288 aa14.14□□□□□ -0.15
CKS1B-206ENST00000474215 LEMD3Q9Y2U8 911 aa14.14□□□□□ -0.15
CKS1B-206ENST00000474215 ZBTB12Q9Y330 459 aaPredicted RBP14.14□□□□□ -0.15
CKS1B-206ENST00000474215 CHMP3Q9Y3E7 222 aa14.14□□□□□ -0.15
CKS1B-206ENST00000474215 VIL1P09327 827 aaKnown RBP14.13□□□□□ -0.15
CKS1B-206ENST00000474215 NBPF7P0C2Y1 421 aaPredicted RBP14.13□□□□□ -0.15
CKS1B-206ENST00000474215 CCDC57Q2TAC2 916 aa14.13□□□□□ -0.15
CKS1B-206ENST00000474215 PODNQ7Z5L7 613 aa14.13□□□□□ -0.15
CKS1B-206ENST00000474215 ADAMTSL1Q8N6G6 1762 aa14.13□□□□□ -0.15
CKS1B-206ENST00000474215 UTYO14607 1347 aa14.13□□□□□ -0.15
CKS1B-206ENST00000474215 MYH3P11055 1940 aa14.12□□□□□ -0.15
CKS1B-206ENST00000474215 TMEM88BA6NKF7 163 aa14.12□□□□□ -0.15
CKS1B-206ENST00000474215 CHRNDQ07001 517 aa14.12□□□□□ -0.15
CKS1B-206ENST00000474215 MICALL2Q8IY33 904 aa14.12□□□□□ -0.15
CKS1B-206ENST00000474215 ZC3H15Q8WU90 426 aaKnown RBP14.12□□□□□ -0.15
CKS1B-206ENST00000474215 PGAP2Q9UHJ9 254 aa14.12□□□□□ -0.15
CKS1B-206ENST00000474215 ZNF804BA4D1E1 1349 aa14.12□□□□□ -0.15
CKS1B-206ENST00000474215 MED23Q9ULK4 1368 aa14.11□□□□□ -0.15
CKS1B-206ENST00000474215 SHTN1A0MZ66 631 aa14.11□□□□□ -0.15
CKS1B-206ENST00000474215 HIRAP54198 1017 aaPredicted RBP14.11□□□□□ -0.15
CKS1B-206ENST00000474215 BRPF1P55201 1214 aaPredicted RBP14.11□□□□□ -0.15
CKS1B-206ENST00000474215 JMYQ8N9B5 988 aa14.11□□□□□ -0.15
CKS1B-206ENST00000474215 KAZALD1Q96I82 304 aa14.11□□□□□ -0.15
CKS1B-206ENST00000474215 SUCLG2Q96I99 432 aa14.11□□□□□ -0.15
CKS1B-206ENST00000474215 KCNJ4P48050 445 aa14.1□□□□□ -0.15
CKS1B-206ENST00000474215 TAF7LQ5H9L4 462 aa14.1□□□□□ -0.15
CKS1B-206ENST00000474215 LDHAL6AQ6ZMR3 332 aa14.1□□□□□ -0.15
CKS1B-206ENST00000474215 SAMD7Q7Z3H4 446 aa14.1□□□□□ -0.15
CKS1B-206ENST00000474215 TXNRD3Q86VQ6 643 aa14.1□□□□□ -0.15
CKS1B-206ENST00000474215 HELBQ8NG08 1087 aaPredicted RBP14.1□□□□□ -0.15
CKS1B-206ENST00000474215 TRPM4Q8TD43 1214 aa14.1□□□□□ -0.15
CKS1B-206ENST00000474215 ZNF594Q96JF6 807 aaPredicted RBP14.1□□□□□ -0.15
CKS1B-206ENST00000474215 COA1Q9GZY4 146 aa14.1□□□□□ -0.15
CKS1B-206ENST00000474215 USP44Q9H0E7 712 aa14.1□□□□□ -0.15
CKS1B-206ENST00000474215 NOB1Q9ULX3 412 aaKnown RBP14.1□□□□□ -0.15
CKS1B-206ENST00000474215 USP17L3A6NCW0 530 aa14.09□□□□□ -0.15
CKS1B-206ENST00000474215 USP17L4A6NCW7 530 aa14.09□□□□□ -0.15
CKS1B-206ENST00000474215 TAF5LO75529 589 aa14.09□□□□□ -0.15
CKS1B-206ENST00000474215 RARSP54136 660 aaKnown RBP14.09□□□□□ -0.15
CKS1B-206ENST00000474215 HNRNPUQ00839 825 aaKnown RBP eCLIP14.09□□□□□ -0.15
CKS1B-206ENST00000474215 RSBN1LQ6PCB5 846 aaPredicted RBP14.09□□□□□ -0.15
CKS1B-206ENST00000474215 USP17L1Q7RTZ2 530 aa14.09□□□□□ -0.15
CKS1B-206ENST00000474215 AGBL3Q8NEM8 1001 aa14.09□□□□□ -0.15
CKS1B-206ENST00000474215 TRAF5O00463 557 aa14.08□□□□□ -0.16
CKS1B-206ENST00000474215 FMR1Q06787 632 aaKnown RBP eCLIP14.08□□□□□ -0.16
CKS1B-206ENST00000474215 RABL6Q3YEC7 729 aaPredicted RBP14.08□□□□□ -0.16
CKS1B-206ENST00000474215 TBC1D10BQ4KMP7 808 aaPredicted RBP14.08□□□□□ -0.16
CKS1B-206ENST00000474215 RBM26Q5T8P6 1007 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms