RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 ADARB2Q9NS39 739 aaKnown RBP23.58■■□□□ 1.37
CCDC171-206ENST00000474193 BSDC1Q9NW68 430 aaPredicted RBP23.58■■□□□ 1.37
CCDC171-206ENST00000474193 RTL9Q8NET4 1388 aa23.57■■□□□ 1.36
CCDC171-206ENST00000474193 LRRC37AA6NMS7 1700 aa23.57■■□□□ 1.36
CCDC171-206ENST00000474193 ATP2B4P23634 1241 aa23.57■■□□□ 1.36
CCDC171-206ENST00000474193 EPS15P42566 896 aa23.57■■□□□ 1.36
CCDC171-206ENST00000474193 HTRA3P83110 453 aa23.57■■□□□ 1.36
CCDC171-206ENST00000474193 BEND3Q5T5X7 828 aa23.57■■□□□ 1.36
CCDC171-206ENST00000474193 KLRG1Q96E93 195 aa23.57■■□□□ 1.36
CCDC171-206ENST00000474193 SRCIN1Q9C0H9 1055 aa23.57■■□□□ 1.36
CCDC171-206ENST00000474193 DBNDD1Q9H9R9 158 aa23.57■■□□□ 1.36
CCDC171-206ENST00000474193 GPRC5DQ9NZD1 345 aa23.57■■□□□ 1.36
CCDC171-206ENST00000474193 H7C1D1 291 aa23.56■■□□□ 1.36
CCDC171-206ENST00000474193 ALDH1L1O75891 902 aa23.56■■□□□ 1.36
CCDC171-206ENST00000474193 GMPSP49915 693 aaPredicted RBP23.56■■□□□ 1.36
CCDC171-206ENST00000474193 CNTROBQ8N137 903 aa23.56■■□□□ 1.36
CCDC171-206ENST00000474193 MYH3P11055 1940 aa23.56■■□□□ 1.36
CCDC171-206ENST00000474193 ECE2O60344 883 aa23.55■■□□□ 1.36
CCDC171-206ENST00000474193 ITGA6P23229 1130 aa23.55■■□□□ 1.36
CCDC171-206ENST00000474193 DOK7Q18PE1 504 aa23.55■■□□□ 1.36
CCDC171-206ENST00000474193 CHMP3Q9Y3E7 222 aa23.55■■□□□ 1.36
CCDC171-206ENST00000474193 ANKRD18BA2A2Z9 1011 aa23.54■■□□□ 1.36
CCDC171-206ENST00000474193 CSF1RP07333 972 aa23.54■■□□□ 1.36
CCDC171-206ENST00000474193 ANKRD2Q9GZV1 360 aa23.54■■□□□ 1.36
CCDC171-206ENST00000474193 CREBZFQ9NS37 354 aa23.54■■□□□ 1.36
CCDC171-206ENST00000474193 GRM8O00222 908 aa23.53■■□□□ 1.36
CCDC171-206ENST00000474193 CASP7P55210 303 aa23.53■■□□□ 1.36
CCDC171-206ENST00000474193 MAP1SQ66K74 1059 aaPredicted RBP23.53■■□□□ 1.36
CCDC171-206ENST00000474193 TRMT2AQ8IZ69 625 aaKnown RBP23.53■■□□□ 1.36
CCDC171-206ENST00000474193 CNOT7Q9UIV1 285 aaKnown RBP23.53■■□□□ 1.36
CCDC171-206ENST00000474193 MINPP1Q9UNW1 487 aa23.53■■□□□ 1.36
CCDC171-206ENST00000474193 PTPRCP08575 1304 aa23.53■■□□□ 1.36
CCDC171-206ENST00000474193 YDJCA8MPS7 323 aa23.52■■□□□ 1.36
CCDC171-206ENST00000474193 RPS12P25398 132 aaKnown RBP23.52■■□□□ 1.36
CCDC171-206ENST00000474193 IFIT5Q13325 482 aaKnown RBP23.52■■□□□ 1.36
CCDC171-206ENST00000474193 MRPL50Q8N5N7 158 aaKnown RBP23.52■■□□□ 1.36
CCDC171-206ENST00000474193 DPF2Q92785 391 aa23.52■■□□□ 1.36
CCDC171-206ENST00000474193 CEP350Q5VT06 3117 aa23.52■■□□□ 1.36
CCDC171-206ENST00000474193 PSMD14O00487 310 aa23.51■■□□□ 1.35
CCDC171-206ENST00000474193 ITGBL1O95965 494 aaPredicted RBP23.51■■□□□ 1.35
CCDC171-206ENST00000474193 CT47B1P0C2W7 299 aaPredicted RBP23.51■■□□□ 1.35
CCDC171-206ENST00000474193 ALDH1L2Q3SY69 923 aa23.51■■□□□ 1.35
CCDC171-206ENST00000474193 TAF7LQ5H9L4 462 aa23.51■■□□□ 1.35
CCDC171-206ENST00000474193 GPR101Q96P66 508 aaPredicted RBP23.51■■□□□ 1.35
CCDC171-206ENST00000474193 LEMD3Q9Y2U8 911 aa23.51■■□□□ 1.35
CCDC171-206ENST00000474193 DUOX1Q9NRD9 1551 aa23.51■■□□□ 1.35
CCDC171-206ENST00000474193 TMEM88BA6NKF7 163 aa23.5■■□□□ 1.35
CCDC171-206ENST00000474193 CCDC57Q2TAC2 916 aa23.5■■□□□ 1.35
CCDC171-206ENST00000474193 FAM161AQ3B820 660 aa23.5■■□□□ 1.35
CCDC171-206ENST00000474193 PASKQ96RG2 1323 aa23.5■■□□□ 1.35
CCDC171-206ENST00000474193 KCNJ4P48050 445 aa23.49■■□□□ 1.35
CCDC171-206ENST00000474193 CCT4P50991 539 aaKnown RBP23.49■■□□□ 1.35
CCDC171-206ENST00000474193 PODNQ7Z5L7 613 aa23.49■■□□□ 1.35
CCDC171-206ENST00000474193 SSH1Q8WYL5 1049 aa23.49■■□□□ 1.35
CCDC171-206ENST00000474193 LMBR1LQ6UX01 489 aa23.48■■□□□ 1.35
CCDC171-206ENST00000474193 MICALL2Q8IY33 904 aa23.48■■□□□ 1.35
CCDC171-206ENST00000474193 ZC3H15Q8WU90 426 aaKnown RBP23.48■■□□□ 1.35
CCDC171-206ENST00000474193 SMC4Q9NTJ3 1288 aa23.48■■□□□ 1.35
CCDC171-206ENST00000474193 ZBTB12Q9Y330 459 aaPredicted RBP23.48■■□□□ 1.35
CCDC171-206ENST00000474193 FOXO4P98177 505 aa23.47■■□□□ 1.35
CCDC171-206ENST00000474193 COL4A1P02462 1669 aa23.47■■□□□ 1.35
CCDC171-206ENST00000474193 VIL1P09327 827 aaKnown RBP23.45■■□□□ 1.34
CCDC171-206ENST00000474193 JMYQ8N9B5 988 aa23.45■■□□□ 1.34
CCDC171-206ENST00000474193 MED23Q9ULK4 1368 aa23.44■■□□□ 1.34
CCDC171-206ENST00000474193 ZNF804BA4D1E1 1349 aa23.44■■□□□ 1.34
CCDC171-206ENST00000474193 AGBL3Q8NEM8 1001 aa23.44■■□□□ 1.34
CCDC171-206ENST00000474193 KCNQ5Q9NR82 932 aa23.44■■□□□ 1.34
CCDC171-206ENST00000474193 LTBP1Q14766 1721 aa23.44■■□□□ 1.34
CCDC171-206ENST00000474193 ADAMTSL1Q8N6G6 1762 aa23.43■■□□□ 1.34
CCDC171-206ENST00000474193 USP17L3A6NCW0 530 aa23.43■■□□□ 1.34
CCDC171-206ENST00000474193 USP17L4A6NCW7 530 aa23.43■■□□□ 1.34
CCDC171-206ENST00000474193 CHRNDQ07001 517 aa23.43■■□□□ 1.34
CCDC171-206ENST00000474193 LDHAL6AQ6ZMR3 332 aa23.43■■□□□ 1.34
CCDC171-206ENST00000474193 USP17L1Q7RTZ2 530 aa23.43■■□□□ 1.34
CCDC171-206ENST00000474193 COA1Q9GZY4 146 aa23.43■■□□□ 1.34
CCDC171-206ENST00000474193 CNNM1Q9NRU3 951 aa23.43■■□□□ 1.34
CCDC171-206ENST00000474193 MKRN1Q9UHC7 482 aaKnown RBP23.43■■□□□ 1.34
CCDC171-206ENST00000474193 RBM26Q5T8P6 1007 aaKnown RBP23.42■■□□□ 1.34
CCDC171-206ENST00000474193 RSBN1LQ6PCB5 846 aaPredicted RBP23.42■■□□□ 1.34
CCDC171-206ENST00000474193 CDC37L1Q7L3B6 337 aa23.42■■□□□ 1.34
CCDC171-206ENST00000474193 PGAP2Q9UHJ9 254 aa23.42■■□□□ 1.34
CCDC171-206ENST00000474193 ABT1Q9ULW3 272 aaKnown RBP23.42■■□□□ 1.34
CCDC171-206ENST00000474193 SPEF2Q9C093 1822 aa23.41■■□□□ 1.34
CCDC171-206ENST00000474193 SAMD7Q7Z3H4 446 aa23.41■■□□□ 1.34
CCDC171-206ENST00000474193 FBXW7Q969H0 707 aa23.41■■□□□ 1.34
CCDC171-206ENST00000474193 DEFB115Q30KQ5 88 aa23.4■■□□□ 1.34
CCDC171-206ENST00000474193 TBC1D10BQ4KMP7 808 aaPredicted RBP23.4■■□□□ 1.34
CCDC171-206ENST00000474193 DCPSQ96C86 337 aaKnown RBP23.4■■□□□ 1.34
CCDC171-206ENST00000474193 NBPF7P0C2Y1 421 aaPredicted RBP23.39■■□□□ 1.33
CCDC171-206ENST00000474193 EPHA10Q5JZY3 1008 aa23.39■■□□□ 1.33
CCDC171-206ENST00000474193 OGFOD1Q8N543 542 aa23.39■■□□□ 1.33
CCDC171-206ENST00000474193 TRPM4Q8TD43 1214 aa23.39■■□□□ 1.33
CCDC171-206ENST00000474193 SUCLG2Q96I99 432 aa23.39■■□□□ 1.33
CCDC171-206ENST00000474193 API5Q9BZZ5 524 aaKnown RBP23.39■■□□□ 1.33
CCDC171-206ENST00000474193 HDAC5Q9UQL6 1122 aa23.39■■□□□ 1.33
CCDC171-206ENST00000474193 UTYO14607 1347 aa23.38■■□□□ 1.33
CCDC171-206ENST00000474193 HIRAP54198 1017 aaPredicted RBP23.38■■□□□ 1.33
CCDC171-206ENST00000474193 MYO3BQ8WXR4 1341 aa23.37■■□□□ 1.33
CCDC171-206ENST00000474193 SHTN1A0MZ66 631 aa23.37■■□□□ 1.33
CCDC171-206ENST00000474193 PLIN1O60240 522 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms