RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 GGA3Q9NZ52 723 aa26.36■■□□□ 1.81
APP-215ENST00000474136 CHPF2Q9P2E5 772 aa26.36■■□□□ 1.81
APP-215ENST00000474136 POLR2AP24928 1970 aaKnown RBP26.35■■□□□ 1.81
APP-215ENST00000474136 ATP5J2-PTCD1G3V325 749 aa26.35■■□□□ 1.81
APP-215ENST00000474136 SLC10A3P09131 477 aa26.35■■□□□ 1.81
APP-215ENST00000474136 CSRNP1Q96S65 589 aa26.35■■□□□ 1.81
APP-215ENST00000474136 TMPOP42166 694 aaKnown RBP26.34■■□□□ 1.81
APP-215ENST00000474136 TBC1D16Q8TBP0 767 aa26.34■■□□□ 1.81
APP-215ENST00000474136 ISCA1Q9BUE6 129 aa26.34■■□□□ 1.81
APP-215ENST00000474136 DDX60Q8IY21 1712 aaKnown RBP26.33■■□□□ 1.81
APP-215ENST00000474136 ANP32CO43423 234 aa26.33■■□□□ 1.81
APP-215ENST00000474136 SULF1Q8IWU6 871 aa26.33■■□□□ 1.81
APP-215ENST00000474136 PLBD2Q8NHP8 589 aa26.33■■□□□ 1.81
APP-215ENST00000474136 EYA3Q99504 573 aa26.33■■□□□ 1.81
APP-215ENST00000474136 CDCA5Q96FF9 252 aa26.32■■□□□ 1.8
APP-215ENST00000474136 VIL1P09327 827 aaKnown RBP26.31■■□□□ 1.8
APP-215ENST00000474136 ANKRD13DQ6ZTN6 518 aa26.31■■□□□ 1.8
APP-215ENST00000474136 CHL1O00533 1208 aa26.29■■□□□ 1.8
APP-215ENST00000474136 RPS8P62241 208 aaKnown RBP26.29■■□□□ 1.8
APP-215ENST00000474136 LMOD3Q0VAK6 560 aa26.29■■□□□ 1.8
APP-215ENST00000474136 HDGFL1Q5TGJ6 251 aa26.29■■□□□ 1.8
APP-215ENST00000474136 CTU1Q7Z7A3 348 aaKnown RBP26.29■■□□□ 1.8
APP-215ENST00000474136 ZC3H12CQ9C0D7 883 aaKnown RBP26.29■■□□□ 1.8
APP-215ENST00000474136 LAS1LQ9Y4W2 734 aaKnown RBP26.29■■□□□ 1.8
APP-215ENST00000474136 IRS4O14654 1257 aaPredicted RBP26.28■■□□□ 1.8
APP-215ENST00000474136 NEUROD2Q15784 382 aa26.28■■□□□ 1.8
APP-215ENST00000474136 RASAL3Q86YV0 1011 aa26.28■■□□□ 1.8
APP-215ENST00000474136 SCN9AQ15858 1988 aa26.27■■□□□ 1.8
APP-215ENST00000474136 SCARF1Q14162 830 aa26.27■■□□□ 1.8
APP-215ENST00000474136 ANGEL2Q5VTE6 544 aaKnown RBP26.27■■□□□ 1.8
APP-215ENST00000474136 SEC31BQ9NQW1 1179 aa26.27■■□□□ 1.8
APP-215ENST00000474136 UFL1O94874 794 aa26.26■■□□□ 1.79
APP-215ENST00000474136 CCDC146Q8IYE0 955 aa26.25■■□□□ 1.79
APP-215ENST00000474136 PODXL2Q9NZ53 605 aa26.25■■□□□ 1.79
APP-215ENST00000474136 SCAF8Q9UPN6 1271 aaKnown RBP26.25■■□□□ 1.79
APP-215ENST00000474136 G3V3G9 751 aa26.24■■□□□ 1.79
APP-215ENST00000474136 ZNF280AP59817 542 aaPredicted RBP26.24■■□□□ 1.79
APP-215ENST00000474136 DCAF8Q5TAQ9 597 aa26.24■■□□□ 1.79
APP-215ENST00000474136 MOB2Q70IA6 237 aa26.24■■□□□ 1.79
APP-215ENST00000474136 RSBN1LQ6PCB5 846 aaPredicted RBP26.23■■□□□ 1.79
APP-215ENST00000474136 ANKIB1Q9P2G1 1089 aa26.23■■□□□ 1.79
APP-215ENST00000474136 DBF4Q9UBU7 674 aaPredicted RBP26.23■■□□□ 1.79
APP-215ENST00000474136 HPS5Q9UPZ3 1129 aa26.23■■□□□ 1.79
APP-215ENST00000474136 AKAP11Q9UKA4 1901 aa26.23■■□□□ 1.79
APP-215ENST00000474136 RALBP1Q15311 655 aa26.22■■□□□ 1.79
APP-215ENST00000474136 GGA1Q9UJY5 639 aa26.22■■□□□ 1.79
APP-215ENST00000474136 TRIM35Q9UPQ4 493 aa26.22■■□□□ 1.79
APP-215ENST00000474136 TRIM28Q13263 835 aaKnown RBP26.21■■□□□ 1.79
APP-215ENST00000474136 AGBL3Q8NEM8 1001 aa26.21■■□□□ 1.79
APP-215ENST00000474136 PRPF38BQ5VTL8 546 aaKnown RBP26.2■■□□□ 1.79
APP-215ENST00000474136 REM2Q8IYK8 340 aaPredicted RBP26.2■■□□□ 1.79
APP-215ENST00000474136 TBC1D8O95759 1140 aa26.19■■□□□ 1.78
APP-215ENST00000474136 PRAMEF18Q5VWM3 479 aa26.19■■□□□ 1.78
APP-215ENST00000474136 ZBTB38Q8NAP3 1195 aaPredicted RBP26.19■■□□□ 1.78
APP-215ENST00000474136 GMLQ99445 158 aa26.19■■□□□ 1.78
APP-215ENST00000474136 PRKRIP1Q9H875 184 aaPredicted RBP26.19■■□□□ 1.78
APP-215ENST00000474136 MYOZ2Q9NPC6 264 aa26.19■■□□□ 1.78
APP-215ENST00000474136 HYPKQ9NX55 129 aa26.19■■□□□ 1.78
APP-215ENST00000474136 UBE2Q2LH0YL09 131 aa26.18■■□□□ 1.78
APP-215ENST00000474136 HOXB7P09629 217 aa26.18■■□□□ 1.78
APP-215ENST00000474136 FKBP1BP68106 108 aa26.18■■□□□ 1.78
APP-215ENST00000474136 JARID2Q92833 1246 aaPredicted RBP26.18■■□□□ 1.78
APP-215ENST00000474136 CCDC85AQ96PX6 553 aaPredicted RBP26.18■■□□□ 1.78
APP-215ENST00000474136 ZNF609O15014 1411 aa26.17■■□□□ 1.78
APP-215ENST00000474136 USP17L8P0C7I0 530 aa26.17■■□□□ 1.78
APP-215ENST00000474136 DUSP27Q5VZP5 1158 aa26.17■■□□□ 1.78
APP-215ENST00000474136 ZNF296Q8WUU4 475 aaPredicted RBP26.17■■□□□ 1.78
APP-215ENST00000474136 RIC3Q7Z5B4 369 aa26.16■■□□□ 1.78
APP-215ENST00000474136 HDAC9Q9UKV0 1011 aa26.16■■□□□ 1.78
APP-215ENST00000474136 PAPPA2Q9BXP8 1791 aa26.16■■□□□ 1.78
APP-215ENST00000474136 PITPNM2Q9BZ72 1349 aa26.15■■□□□ 1.78
APP-215ENST00000474136 WTIPA6NIX2 430 aaPredicted RBP26.14■■□□□ 1.78
APP-215ENST00000474136 MYD88Q99836 296 aa26.14■■□□□ 1.78
APP-215ENST00000474136 PHAXQ9H814 394 aaKnown RBP26.14■■□□□ 1.78
APP-215ENST00000474136 USP17L3A6NCW0 530 aa26.14■■□□□ 1.77
APP-215ENST00000474136 USP17L4A6NCW7 530 aa26.14■■□□□ 1.77
APP-215ENST00000474136 NBPF9Q3BBW0 867 aa26.14■■□□□ 1.77
APP-215ENST00000474136 CCDC152Q4G0S7 254 aa26.14■■□□□ 1.77
APP-215ENST00000474136 USP17L1Q7RTZ2 530 aa26.14■■□□□ 1.77
APP-215ENST00000474136 GOLGA2Q08379 1002 aa26.13■■□□□ 1.77
APP-215ENST00000474136 MKRN3Q13064 507 aaKnown RBP26.13■■□□□ 1.77
APP-215ENST00000474136 PKN2Q16513 984 aaKnown RBP26.13■■□□□ 1.77
APP-215ENST00000474136 MIER1Q8N108 512 aa26.13■■□□□ 1.77
APP-215ENST00000474136 MXD3Q9BW11 206 aa26.13■■□□□ 1.77
APP-215ENST00000474136 XDHP47989 1333 aa26.12■■□□□ 1.77
APP-215ENST00000474136 PDE8AO60658 829 aa26.12■■□□□ 1.77
APP-215ENST00000474136 PCCAP05165 728 aaPredicted RBP26.11■■□□□ 1.77
APP-215ENST00000474136 TTLL12Q14166 644 aaPredicted RBP26.11■■□□□ 1.77
APP-215ENST00000474136 ANKRD18AQ8IVF6 992 aa26.11■■□□□ 1.77
APP-215ENST00000474136 RUNDC1Q96C34 613 aa26.11■■□□□ 1.77
APP-215ENST00000474136 MBIPQ9NS73 344 aa26.11■■□□□ 1.77
APP-215ENST00000474136 GPR25O00155 361 aa26.1■■□□□ 1.77
APP-215ENST00000474136 HSP90B1P14625 803 aaKnown RBP26.1■■□□□ 1.77
APP-215ENST00000474136 ATP2B4P23634 1241 aa26.1■■□□□ 1.77
APP-215ENST00000474136 PODNQ7Z5L7 613 aa26.1■■□□□ 1.77
APP-215ENST00000474136 CCER2I3L3R5 266 aa26.09■■□□□ 1.77
APP-215ENST00000474136 TM4SF4P48230 202 aa26.09■■□□□ 1.77
APP-215ENST00000474136 CCDC191Q8NCU4 936 aa26.09■■□□□ 1.77
APP-215ENST00000474136 R3HDMLQ9H3Y0 253 aa26.08■■□□□ 1.77
APP-215ENST00000474136 MYBBP1AQ9BQG0 1328 aaKnown RBP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms