RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 GREM2Q9H772 168 aa25.93■■□□□ 1.74
SNX13-206ENST00000474067 CREBZFQ9NS37 354 aa25.93■■□□□ 1.74
SNX13-206ENST00000474067 SLC4A10Q6U841 1118 aa25.92■■□□□ 1.74
SNX13-206ENST00000474067 KLRG1Q96E93 195 aa25.92■■□□□ 1.74
SNX13-206ENST00000474067 ANKRD2Q9GZV1 360 aa25.92■■□□□ 1.74
SNX13-206ENST00000474067 ANKRD18BA2A2Z9 1011 aa25.91■■□□□ 1.74
SNX13-206ENST00000474067 F6X3S4 739 aa25.91■■□□□ 1.74
SNX13-206ENST00000474067 H7C1D1 291 aa25.91■■□□□ 1.74
SNX13-206ENST00000474067 GRM8O00222 908 aa25.91■■□□□ 1.74
SNX13-206ENST00000474067 RIMBP2O15034 1052 aa25.91■■□□□ 1.74
SNX13-206ENST00000474067 RAD17O75943 681 aa25.91■■□□□ 1.74
SNX13-206ENST00000474067 CSF1RP07333 972 aa25.91■■□□□ 1.74
SNX13-206ENST00000474067 ITGA6P23229 1130 aa25.91■■□□□ 1.74
SNX13-206ENST00000474067 SLC51AQ86UW1 340 aa25.91■■□□□ 1.74
SNX13-206ENST00000474067 LTBP1Q14766 1721 aa25.91■■□□□ 1.74
SNX13-206ENST00000474067 ECE2O60344 883 aa25.9■■□□□ 1.74
SNX13-206ENST00000474067 POTEIP0CG38 1075 aa25.9■■□□□ 1.74
SNX13-206ENST00000474067 POTEJP0CG39 1038 aa25.9■■□□□ 1.74
SNX13-206ENST00000474067 IFIT5Q13325 482 aaKnown RBP25.9■■□□□ 1.74
SNX13-206ENST00000474067 DPF2Q92785 391 aa25.9■■□□□ 1.74
SNX13-206ENST00000474067 EPS15P42566 896 aa25.89■■□□□ 1.74
SNX13-206ENST00000474067 GMPSP49915 693 aaPredicted RBP25.89■■□□□ 1.74
SNX13-206ENST00000474067 CASP7P55210 303 aa25.89■■□□□ 1.74
SNX13-206ENST00000474067 DIEXFQ68CQ4 756 aaKnown RBP25.89■■□□□ 1.74
SNX13-206ENST00000474067 CNTROBQ8N137 903 aa25.89■■□□□ 1.74
SNX13-206ENST00000474067 DNAJC5GQ8N7S2 189 aa25.89■■□□□ 1.74
SNX13-206ENST00000474067 DBNDD1Q9H9R9 158 aa25.89■■□□□ 1.74
SNX13-206ENST00000474067 LEMD3Q9Y2U8 911 aa25.89■■□□□ 1.74
SNX13-206ENST00000474067 ADAMTSL1Q8N6G6 1762 aa25.89■■□□□ 1.73
SNX13-206ENST00000474067 ZC3H15Q8WU90 426 aaKnown RBP25.88■■□□□ 1.73
SNX13-206ENST00000474067 MINPP1Q9UNW1 487 aa25.88■■□□□ 1.73
SNX13-206ENST00000474067 CCDC57Q2TAC2 916 aa25.87■■□□□ 1.73
SNX13-206ENST00000474067 PODNQ7Z5L7 613 aa25.87■■□□□ 1.73
SNX13-206ENST00000474067 MRPL50Q8N5N7 158 aaKnown RBP25.87■■□□□ 1.73
SNX13-206ENST00000474067 CHMP3Q9Y3E7 222 aa25.87■■□□□ 1.73
SNX13-206ENST00000474067 PASKQ96RG2 1323 aa25.87■■□□□ 1.73
SNX13-206ENST00000474067 MED23Q9ULK4 1368 aa25.86■■□□□ 1.73
SNX13-206ENST00000474067 TMEM88BA6NKF7 163 aa25.86■■□□□ 1.73
SNX13-206ENST00000474067 YDJCA8MPS7 323 aa25.86■■□□□ 1.73
SNX13-206ENST00000474067 FAM161AQ3B820 660 aa25.86■■□□□ 1.73
SNX13-206ENST00000474067 TAF7LQ5H9L4 462 aa25.86■■□□□ 1.73
SNX13-206ENST00000474067 KCNJ4P48050 445 aa25.85■■□□□ 1.73
SNX13-206ENST00000474067 CCT4P50991 539 aaKnown RBP25.85■■□□□ 1.73
SNX13-206ENST00000474067 CNOT7Q9UIV1 285 aaKnown RBP25.85■■□□□ 1.73
SNX13-206ENST00000474067 PSMD14O00487 310 aa25.84■■□□□ 1.73
SNX13-206ENST00000474067 ITGBL1O95965 494 aaPredicted RBP25.84■■□□□ 1.73
SNX13-206ENST00000474067 DOK7Q18PE1 504 aa25.84■■□□□ 1.73
SNX13-206ENST00000474067 MAP1SQ66K74 1059 aaPredicted RBP25.84■■□□□ 1.73
SNX13-206ENST00000474067 SMC4Q9NTJ3 1288 aa25.84■■□□□ 1.73
SNX13-206ENST00000474067 TRMT2AQ8IZ69 625 aaKnown RBP25.83■■□□□ 1.73
SNX13-206ENST00000474067 SSH1Q8WYL5 1049 aa25.83■■□□□ 1.73
SNX13-206ENST00000474067 HDAC5Q9UQL6 1122 aa25.83■■□□□ 1.73
SNX13-206ENST00000474067 MICALL2Q8IY33 904 aa25.82■■□□□ 1.72
SNX13-206ENST00000474067 JMYQ8N9B5 988 aa25.82■■□□□ 1.72
SNX13-206ENST00000474067 AGBL3Q8NEM8 1001 aa25.82■■□□□ 1.72
SNX13-206ENST00000474067 COA1Q9GZY4 146 aa25.82■■□□□ 1.72
SNX13-206ENST00000474067 COL4A1P02462 1669 aa25.82■■□□□ 1.72
SNX13-206ENST00000474067 VIL1P09327 827 aaKnown RBP25.81■■□□□ 1.72
SNX13-206ENST00000474067 MMP14P50281 582 aa25.81■■□□□ 1.72
SNX13-206ENST00000474067 HTRA3P83110 453 aa25.81■■□□□ 1.72
SNX13-206ENST00000474067 FOXO4P98177 505 aa25.81■■□□□ 1.72
SNX13-206ENST00000474067 LMBR1LQ6UX01 489 aa25.81■■□□□ 1.72
SNX13-206ENST00000474067 SPEF2Q9C093 1822 aa25.81■■□□□ 1.72
SNX13-206ENST00000474067 ZNF609O15014 1411 aa25.8■■□□□ 1.72
SNX13-206ENST00000474067 CDCA7LQ96GN5 454 aa25.8■■□□□ 1.72
SNX13-206ENST00000474067 ZNF804BA4D1E1 1349 aa25.8■■□□□ 1.72
SNX13-206ENST00000474067 MYO3BQ8WXR4 1341 aa25.8■■□□□ 1.72
SNX13-206ENST00000474067 USP17L3A6NCW0 530 aa25.79■■□□□ 1.72
SNX13-206ENST00000474067 USP17L4A6NCW7 530 aa25.79■■□□□ 1.72
SNX13-206ENST00000474067 USP17L1Q7RTZ2 530 aa25.79■■□□□ 1.72
SNX13-206ENST00000474067 UTYO14607 1347 aa25.79■■□□□ 1.72
SNX13-206ENST00000474067 CDC37L1Q7L3B6 337 aa25.78■■□□□ 1.72
SNX13-206ENST00000474067 GPR101Q96P66 508 aaPredicted RBP25.78■■□□□ 1.72
SNX13-206ENST00000474067 API5Q9BZZ5 524 aaKnown RBP25.78■■□□□ 1.72
SNX13-206ENST00000474067 PGAP2Q9UHJ9 254 aa25.78■■□□□ 1.72
SNX13-206ENST00000474067 BRPF1P55201 1214 aaPredicted RBP25.77■■□□□ 1.72
SNX13-206ENST00000474067 CHRNDQ07001 517 aa25.77■■□□□ 1.72
SNX13-206ENST00000474067 RSBN1LQ6PCB5 846 aaPredicted RBP25.77■■□□□ 1.72
SNX13-206ENST00000474067 LDHAL6AQ6ZMR3 332 aa25.77■■□□□ 1.72
SNX13-206ENST00000474067 CNNM1Q9NRU3 951 aa25.77■■□□□ 1.72
SNX13-206ENST00000474067 ZBTB12Q9Y330 459 aaPredicted RBP25.77■■□□□ 1.72
SNX13-206ENST00000474067 KIF16BQ96L93 1317 aa25.77■■□□□ 1.72
SNX13-206ENST00000474067 OGFOD1Q8N543 542 aa25.75■■□□□ 1.71
SNX13-206ENST00000474067 ABT1Q9ULW3 272 aaKnown RBP25.75■■□□□ 1.71
SNX13-206ENST00000474067 CNTNAP1P78357 1384 aa25.74■■□□□ 1.71
SNX13-206ENST00000474067 STRIP1Q5VSL9 837 aa25.74■■□□□ 1.71
SNX13-206ENST00000474067 DCPSQ96C86 337 aaKnown RBP25.74■■□□□ 1.71
SNX13-206ENST00000474067 PSME4Q14997 1843 aa25.74■■□□□ 1.71
SNX13-206ENST00000474067 C15orf52Q6ZUT6 534 aaKnown RBP25.73■■□□□ 1.71
SNX13-206ENST00000474067 CEP350Q5VT06 3117 aa25.72■■□□□ 1.71
SNX13-206ENST00000474067 IPO8O15397 1037 aaKnown RBP25.72■■□□□ 1.71
SNX13-206ENST00000474067 NBPF7P0C2Y1 421 aaPredicted RBP25.72■■□□□ 1.71
SNX13-206ENST00000474067 USP17L8P0C7I0 530 aa25.72■■□□□ 1.71
SNX13-206ENST00000474067 KIF4BQ2VIQ3 1234 aa25.72■■□□□ 1.71
SNX13-206ENST00000474067 DEFB115Q30KQ5 88 aa25.72■■□□□ 1.71
SNX13-206ENST00000474067 ZNF804AQ7Z570 1209 aa25.72■■□□□ 1.71
SNX13-206ENST00000474067 MIER1Q8N108 512 aa25.72■■□□□ 1.71
SNX13-206ENST00000474067 SUCLG2Q96I99 432 aa25.72■■□□□ 1.71
SNX13-206ENST00000474067 MKRN1Q9UHC7 482 aaKnown RBP25.72■■□□□ 1.71
SNX13-206ENST00000474067 ECE1P42892 770 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms