RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 PHF24Q9UPV7 400 aa7.64□□□□□ -1.19
ATPAF1-204ENST00000474020 MYOM1P52179 1685 aa7.63□□□□□ -1.19
ATPAF1-204ENST00000474020 PIK3C2BO00750 1634 aa7.63□□□□□ -1.19
ATPAF1-204ENST00000474020 USP17L3A6NCW0 530 aa7.63□□□□□ -1.19
ATPAF1-204ENST00000474020 USP17L4A6NCW7 530 aa7.63□□□□□ -1.19
ATPAF1-204ENST00000474020 CELA2BP08218 269 aaPredicted RBP7.63□□□□□ -1.19
ATPAF1-204ENST00000474020 MX2P20592 715 aa7.63□□□□□ -1.19
ATPAF1-204ENST00000474020 EFHC2Q5JST6 749 aa7.63□□□□□ -1.19
ATPAF1-204ENST00000474020 USP17L2Q6R6M4 530 aa7.63□□□□□ -1.19
ATPAF1-204ENST00000474020 USP17L1Q7RTZ2 530 aa7.63□□□□□ -1.19
ATPAF1-204ENST00000474020 C1orf216Q8TAB5 229 aa7.63□□□□□ -1.19
ATPAF1-204ENST00000474020 ZNF358Q9NW07 568 aa7.63□□□□□ -1.19
ATPAF1-204ENST00000474020 QRICH2Q9H0J4 1663 aa7.63□□□□□ -1.19
ATPAF1-204ENST00000474020 NSD3Q9BZ95 1437 aa7.62□□□□□ -1.19
ATPAF1-204ENST00000474020 ATAD2Q6PL18 1390 aa7.62□□□□□ -1.19
ATPAF1-204ENST00000474020 A6NJR5 290 aa7.62□□□□□ -1.19
ATPAF1-204ENST00000474020 ANP32AP39687 249 aaKnown RBP7.62□□□□□ -1.19
ATPAF1-204ENST00000474020 ATP1A2P50993 1020 aa7.62□□□□□ -1.19
ATPAF1-204ENST00000474020 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.62□□□□□ -1.19
ATPAF1-204ENST00000474020 GLMNQ92990 594 aa7.62□□□□□ -1.19
ATPAF1-204ENST00000474020 TERF2IPQ9NYB0 399 aa7.62□□□□□ -1.19
ATPAF1-204ENST00000474020 POGKQ9P215 609 aa7.62□□□□□ -1.19
ATPAF1-204ENST00000474020 USP3Q9Y6I4 520 aa7.62□□□□□ -1.19
ATPAF1-204ENST00000474020 ADGRB1O14514 1584 aa7.62□□□□□ -1.19
ATPAF1-204ENST00000474020 REREQ9P2R6 1566 aa7.62□□□□□ -1.19
ATPAF1-204ENST00000474020 AGLP35573 1532 aa7.62□□□□□ -1.19
ATPAF1-204ENST00000474020 NEXMIFQ5QGS0 1516 aa7.62□□□□□ -1.19
ATPAF1-204ENST00000474020 YEATS2Q9ULM3 1422 aa7.61□□□□□ -1.19
ATPAF1-204ENST00000474020 POLR3AO14802 1390 aaPredicted RBP7.61□□□□□ -1.19
ATPAF1-204ENST00000474020 ANKRD36BQ8N2N9 1353 aa7.61□□□□□ -1.19
ATPAF1-204ENST00000474020 USP32Q8NFA0 1604 aa7.61□□□□□ -1.19
ATPAF1-204ENST00000474020 E9PSI1 815 aa7.61□□□□□ -1.19
ATPAF1-204ENST00000474020 ATP4AP20648 1035 aa7.61□□□□□ -1.19
ATPAF1-204ENST00000474020 ZDHHC3Q9NYG2 299 aa7.61□□□□□ -1.19
ATPAF1-204ENST00000474020 DIP2BQ9P265 1576 aa7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 TCERG1O14776 1098 aaKnown RBP7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 ZBTB7BO15156 539 aaPredicted RBP7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 MAP2K3P46734 347 aa7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 MARSP56192 900 aaKnown RBP7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 SRPK2P78362 688 aaKnown RBP7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 IDI1Q13907 227 aa7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 TMEM132EQ6IEE7 984 aa7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 HDGFL2Q7Z4V5 671 aaPredicted RBP7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 AIDAQ96BJ3 306 aa7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 ANP32EQ9BTT0 268 aa7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 PNNQ9H307 717 aaKnown RBP7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 LRRC4BQ9NT99 713 aa7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 NDFIP2Q9NV92 336 aa7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 CABP1Q9NZU7 370 aa7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 SCHIP1Q9P0W5 487 aaPredicted RBP7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 ATXN7L1Q9ULK2 861 aaPredicted RBP7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 PREX1Q8TCU6 1659 aa7.6□□□□□ -1.19
ATPAF1-204ENST00000474020 SPATA31D1Q6ZQQ2 1576 aa7.59□□□□□ -1.19
ATPAF1-204ENST00000474020 CANXP27824 592 aaKnown RBP7.59□□□□□ -1.19
ATPAF1-204ENST00000474020 EPHA4P54764 986 aa7.59□□□□□ -1.19
ATPAF1-204ENST00000474020 CLDN10P78369 228 aa7.59□□□□□ -1.19
ATPAF1-204ENST00000474020 FOXK2Q01167 660 aa7.59□□□□□ -1.19
ATPAF1-204ENST00000474020 FIGNL1Q6PIW4 674 aa7.59□□□□□ -1.19
ATPAF1-204ENST00000474020 NLRP8Q86W28 1048 aa7.59□□□□□ -1.19
ATPAF1-204ENST00000474020 TPCN2Q8NHX9 752 aa7.59□□□□□ -1.19
ATPAF1-204ENST00000474020 EXOC6Q8TAG9 804 aa7.59□□□□□ -1.19
ATPAF1-204ENST00000474020 ACDQ96AP0 544 aa7.59□□□□□ -1.19
ATPAF1-204ENST00000474020 SCARF2Q96GP6 870 aaPredicted RBP7.59□□□□□ -1.19
ATPAF1-204ENST00000474020 DNAAF2Q9NVR5 837 aaKnown RBP7.59□□□□□ -1.19
ATPAF1-204ENST00000474020 MKRN1Q9UHC7 482 aaKnown RBP7.59□□□□□ -1.19
ATPAF1-204ENST00000474020 KIAA1024Q9UPX6 916 aa7.59□□□□□ -1.19
ATPAF1-204ENST00000474020 NKTRP30414 1462 aaKnown RBP7.58□□□□□ -1.2
ATPAF1-204ENST00000474020 NEFMP07197 916 aa7.58□□□□□ -1.2
ATPAF1-204ENST00000474020 BCRP11274 1271 aa7.58□□□□□ -1.2
ATPAF1-204ENST00000474020 TATP17735 454 aaPredicted RBP7.58□□□□□ -1.2
ATPAF1-204ENST00000474020 GSK3AP49840 483 aa7.58□□□□□ -1.2
ATPAF1-204ENST00000474020 CCDC102BQ68D86 513 aa7.58□□□□□ -1.2
ATPAF1-204ENST00000474020 LARGE2Q8N3Y3 721 aa7.58□□□□□ -1.2
ATPAF1-204ENST00000474020 OGFOD1Q8N543 542 aa7.58□□□□□ -1.2
ATPAF1-204ENST00000474020 RUNDC1Q96C34 613 aa7.58□□□□□ -1.2
ATPAF1-204ENST00000474020 STK26Q9P289 416 aa7.58□□□□□ -1.2
ATPAF1-204ENST00000474020 PALM3A6NDB9 673 aaPredicted RBP7.57□□□□□ -1.2
ATPAF1-204ENST00000474020 APAF1O14727 1248 aa7.57□□□□□ -1.2
ATPAF1-204ENST00000474020 BNIP3LO60238 219 aa7.57□□□□□ -1.2
ATPAF1-204ENST00000474020 SLFN5Q08AF3 891 aa7.57□□□□□ -1.2
ATPAF1-204ENST00000474020 TEAD4Q15561 434 aa7.57□□□□□ -1.2
ATPAF1-204ENST00000474020 CCDC146Q8IYE0 955 aa7.57□□□□□ -1.2
ATPAF1-204ENST00000474020 ABHD17AQ96GS6 310 aa7.57□□□□□ -1.2
ATPAF1-204ENST00000474020 OXCT2Q9BYC2 517 aaPredicted RBP7.57□□□□□ -1.2
ATPAF1-204ENST00000474020 ZCCHC2Q9C0B9 1178 aaKnown RBP7.57□□□□□ -1.2
ATPAF1-204ENST00000474020 SLC12A5Q9H2X9 1139 aa7.57□□□□□ -1.2
ATPAF1-204ENST00000474020 PCDHGC4Q9Y5F7 938 aa7.57□□□□□ -1.2
ATPAF1-204ENST00000474020 YTHDC2Q9H6S0 1430 aaKnown RBP7.57□□□□□ -1.2
ATPAF1-204ENST00000474020 ARHGEF28Q8N1W1 1705 aaKnown RBP7.57□□□□□ -1.2
ATPAF1-204ENST00000474020 TMEM131LA2VDJ0 1609 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 MAPK8IP3Q9UPT6 1336 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 SIGLEC1Q9BZZ2 1709 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 M0R2N6 131 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 FGFR3P22607 806 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 RASSF7Q02833 373 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 AAMPQ13685 434 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 ARSJQ5FYB0 599 aaPredicted RBP7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 DUSP27Q5VZP5 1158 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 KANK3Q6NY19 840 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms