RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 DDX19BQ9UMR2 479 aa9.54□□□□□ -0.88
CCDC93-207ENST00000474006 ZNF831Q5JPB2 1677 aa9.54□□□□□ -0.88
CCDC93-207ENST00000474006 UBN2Q6ZU65 1347 aa9.54□□□□□ -0.88
CCDC93-207ENST00000474006 LY75O60449 1722 aa9.53□□□□□ -0.88
CCDC93-207ENST00000474006 FAM177BA6PVY3 158 aa9.53□□□□□ -0.88
CCDC93-207ENST00000474006 GRM8O00222 908 aa9.53□□□□□ -0.88
CCDC93-207ENST00000474006 GNAI3P08754 354 aa9.53□□□□□ -0.88
CCDC93-207ENST00000474006 NBPF7P0C2Y1 421 aaPredicted RBP9.53□□□□□ -0.88
CCDC93-207ENST00000474006 PARP10Q53GL7 1025 aa9.53□□□□□ -0.88
CCDC93-207ENST00000474006 RTL5Q5HYW3 569 aaPredicted RBP9.53□□□□□ -0.88
CCDC93-207ENST00000474006 GPR153Q6NV75 609 aa9.53□□□□□ -0.88
CCDC93-207ENST00000474006 PPP1R42Q7Z4L9 355 aa9.53□□□□□ -0.88
CCDC93-207ENST00000474006 SYNE4Q8N205 404 aa9.53□□□□□ -0.88
CCDC93-207ENST00000474006 FAM89AQ96GI7 184 aa9.53□□□□□ -0.88
CCDC93-207ENST00000474006 MEIS3Q99687 375 aa9.53□□□□□ -0.88
CCDC93-207ENST00000474006 UTP14AQ9BVJ6 771 aaKnown RBP9.53□□□□□ -0.88
CCDC93-207ENST00000474006 FAM117AQ9C073 453 aa9.53□□□□□ -0.88
CCDC93-207ENST00000474006 CHMP4BQ9H444 224 aaKnown RBP9.53□□□□□ -0.88
CCDC93-207ENST00000474006 ZBTB40Q9NUA8 1239 aa9.53□□□□□ -0.88
CCDC93-207ENST00000474006 C4BP0C0L5 1744 aa9.53□□□□□ -0.88
CCDC93-207ENST00000474006 TNS1Q9HBL0 1735 aaKnown RBP9.53□□□□□ -0.88
CCDC93-207ENST00000474006 NUDT7P0C024 238 aa9.52□□□□□ -0.89
CCDC93-207ENST00000474006 ARSIQ5FYB1 569 aa9.52□□□□□ -0.89
CCDC93-207ENST00000474006 C6orf132Q5T0Z8 1188 aa9.52□□□□□ -0.89
CCDC93-207ENST00000474006 MSL1Q68DK7 614 aa9.52□□□□□ -0.89
CCDC93-207ENST00000474006 TPTE2Q6XPS3 522 aa9.52□□□□□ -0.89
CCDC93-207ENST00000474006 ZNF454Q8N9F8 522 aa9.52□□□□□ -0.89
CCDC93-207ENST00000474006 ZBTB38Q8NAP3 1195 aaPredicted RBP9.52□□□□□ -0.89
CCDC93-207ENST00000474006 SLC16A10Q8TF71 515 aa9.52□□□□□ -0.89
CCDC93-207ENST00000474006 ATP10DQ9P241 1426 aa9.52□□□□□ -0.89
CCDC93-207ENST00000474006 RBM27Q9P2N5 1060 aaKnown RBP9.52□□□□□ -0.89
CCDC93-207ENST00000474006 CICQ96RK0 1608 aaPredicted RBP9.52□□□□□ -0.89
CCDC93-207ENST00000474006 UTYO14607 1347 aa9.52□□□□□ -0.89
CCDC93-207ENST00000474006 PSDA5PKW4 1024 aaPredicted RBP9.51□□□□□ -0.89
CCDC93-207ENST00000474006 SOCS7O14512 581 aa9.51□□□□□ -0.89
CCDC93-207ENST00000474006 GNAI2P04899 355 aa9.51□□□□□ -0.89
CCDC93-207ENST00000474006 SERPINB2P05120 415 aa9.51□□□□□ -0.89
CCDC93-207ENST00000474006 PCCAP05165 728 aaPredicted RBP9.51□□□□□ -0.89
CCDC93-207ENST00000474006 UBTFL1P0CB47 393 aaPredicted RBP9.51□□□□□ -0.89
CCDC93-207ENST00000474006 GTF2E1P29083 439 aaPredicted RBP9.51□□□□□ -0.89
CCDC93-207ENST00000474006 CASP7P55210 303 aa9.51□□□□□ -0.89
CCDC93-207ENST00000474006 TTLL12Q14166 644 aaPredicted RBP9.51□□□□□ -0.89
CCDC93-207ENST00000474006 UBE3BQ7Z3V4 1068 aa9.51□□□□□ -0.89
CCDC93-207ENST00000474006 NBPF5PQ86XG9 351 aaPredicted RBP9.51□□□□□ -0.89
CCDC93-207ENST00000474006 MYH14Q7Z406 1995 aaKnown RBP9.5□□□□□ -0.89
CCDC93-207ENST00000474006 POLRMTO00411 1230 aaKnown RBP9.5□□□□□ -0.89
CCDC93-207ENST00000474006 ZBTB7AO95365 584 aa9.5□□□□□ -0.89
CCDC93-207ENST00000474006 NTSR2O95665 410 aa9.5□□□□□ -0.89
CCDC93-207ENST00000474006 MMP10P09238 476 aa9.5□□□□□ -0.89
CCDC93-207ENST00000474006 DDR1Q08345 913 aa9.5□□□□□ -0.89
CCDC93-207ENST00000474006 AAMPQ13685 434 aa9.5□□□□□ -0.89
CCDC93-207ENST00000474006 ERFEQ4G0M1 354 aa9.5□□□□□ -0.89
CCDC93-207ENST00000474006 ERICH6BQ5W0A0 696 aa9.5□□□□□ -0.89
CCDC93-207ENST00000474006 NUTM1Q86Y26 1132 aa9.5□□□□□ -0.89
CCDC93-207ENST00000474006 KAZALD1Q96I82 304 aa9.5□□□□□ -0.89
CCDC93-207ENST00000474006 SUCLG2Q96I99 432 aa9.5□□□□□ -0.89
CCDC93-207ENST00000474006 NYXQ9GZU5 481 aa9.5□□□□□ -0.89
CCDC93-207ENST00000474006 C1orf115Q9H7X2 142 aa9.5□□□□□ -0.89
CCDC93-207ENST00000474006 HDAC5Q9UQL6 1122 aa9.5□□□□□ -0.89
CCDC93-207ENST00000474006 LRRFIP2Q9Y608 721 aaKnown RBP9.5□□□□□ -0.89
CCDC93-207ENST00000474006 PARP3Q9Y6F1 533 aa9.5□□□□□ -0.89
CCDC93-207ENST00000474006 IBTKQ9P2D0 1353 aaPredicted RBP9.5□□□□□ -0.89
CCDC93-207ENST00000474006 COL5A3P25940 1745 aaPredicted RBP9.49□□□□□ -0.89
CCDC93-207ENST00000474006 IRS4O14654 1257 aaPredicted RBP9.49□□□□□ -0.89
CCDC93-207ENST00000474006 HCLS1P14317 486 aaPredicted RBP9.49□□□□□ -0.89
CCDC93-207ENST00000474006 FOXO4P98177 505 aa9.49□□□□□ -0.89
CCDC93-207ENST00000474006 EPHA10Q5JZY3 1008 aa9.49□□□□□ -0.89
CCDC93-207ENST00000474006 SLC10A5Q5PT55 438 aa9.49□□□□□ -0.89
CCDC93-207ENST00000474006 ZNF710Q8N1W2 664 aa9.49□□□□□ -0.89
CCDC93-207ENST00000474006 CCDC24Q8N4L8 307 aa9.49□□□□□ -0.89
CCDC93-207ENST00000474006 TTC13Q8NBP0 860 aa9.49□□□□□ -0.89
CCDC93-207ENST00000474006 KHSRPQ92945 711 aaKnown RBP eCLIP9.49□□□□□ -0.89
CCDC93-207ENST00000474006 TMUB1Q9BVT8 246 aa9.49□□□□□ -0.89
CCDC93-207ENST00000474006 PCDHB15Q9Y5E8 787 aa9.49□□□□□ -0.89
CCDC93-207ENST00000474006 LAMB4A4D0S4 1761 aa9.49□□□□□ -0.89
CCDC93-207ENST00000474006 SH3TC1Q8TE82 1336 aa9.49□□□□□ -0.89
CCDC93-207ENST00000474006 RREB1Q92766 1687 aa9.48□□□□□ -0.89
CCDC93-207ENST00000474006 NPHP1O15259 732 aa9.48□□□□□ -0.89
CCDC93-207ENST00000474006 OATP04181 439 aa9.48□□□□□ -0.89
CCDC93-207ENST00000474006 CLCN1P35523 988 aa9.48□□□□□ -0.89
CCDC93-207ENST00000474006 ATP8B2P98198 1209 aa9.48□□□□□ -0.89
CCDC93-207ENST00000474006 CNBD1Q8NA66 436 aa9.48□□□□□ -0.89
CCDC93-207ENST00000474006 ADAM33Q9BZ11 813 aa9.48□□□□□ -0.89
CCDC93-207ENST00000474006 MTFR1LQ9H019 292 aa9.48□□□□□ -0.89
CCDC93-207ENST00000474006 BICC1Q9H694 974 aaKnown RBP9.48□□□□□ -0.89
CCDC93-207ENST00000474006 CARMIL3Q8ND23 1372 aa9.48□□□□□ -0.89
CCDC93-207ENST00000474006 RGPD3A6NKT7 1758 aaPredicted RBP9.47□□□□□ -0.89
CCDC93-207ENST00000474006 RGPD4Q7Z3J3 1758 aa9.47□□□□□ -0.89
CCDC93-207ENST00000474006 PXDNLA1KZ92 1463 aa9.47□□□□□ -0.89
CCDC93-207ENST00000474006 PDE8AO60658 829 aa9.47□□□□□ -0.89
CCDC93-207ENST00000474006 CSF1RP07333 972 aa9.47□□□□□ -0.89
CCDC93-207ENST00000474006 HSP90B1P14625 803 aaKnown RBP9.47□□□□□ -0.89
CCDC93-207ENST00000474006 PRR5LQ6MZQ0 368 aa9.47□□□□□ -0.89
CCDC93-207ENST00000474006 LMBR1LQ6UX01 489 aa9.47□□□□□ -0.89
CCDC93-207ENST00000474006 SIRT2Q8IXJ6 389 aa9.47□□□□□ -0.89
CCDC93-207ENST00000474006 RPAP2Q8IXW5 612 aaPredicted RBP9.47□□□□□ -0.89
CCDC93-207ENST00000474006 ANKRD44Q8N8A2 993 aa9.47□□□□□ -0.89
CCDC93-207ENST00000474006 PLA2G12BQ9BX93 195 aa9.47□□□□□ -0.89
CCDC93-207ENST00000474006 GOPCQ9HD26 462 aa9.47□□□□□ -0.89
CCDC93-207ENST00000474006 CDHR2Q9BYE9 1310 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms