RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 NFKBIBQ15653 356 aa21.77■■□□□ 1.07
VARS2-206ENST00000473916 KRT27Q7Z3Y8 459 aa21.77■■□□□ 1.07
VARS2-206ENST00000473916 ARHGEF1Q92888 912 aaKnown RBP21.77■■□□□ 1.07
VARS2-206ENST00000473916 COL24A1Q17RW2 1714 aa21.76■■□□□ 1.07
VARS2-206ENST00000473916 NEK4P51957 841 aa21.76■■□□□ 1.07
VARS2-206ENST00000473916 SCARF1Q14162 830 aa21.76■■□□□ 1.07
VARS2-206ENST00000473916 ATP2B3Q16720 1220 aa21.76■■□□□ 1.07
VARS2-206ENST00000473916 UPF3BQ9BZI7 483 aaKnown RBP21.76■■□□□ 1.07
VARS2-206ENST00000473916 PAG1Q9NWQ8 432 aa21.76■■□□□ 1.07
VARS2-206ENST00000473916 AKAP2Q9Y2D5 859 aa21.76■■□□□ 1.07
VARS2-206ENST00000473916 RTCBQ9Y3I0 505 aaKnown RBP21.76■■□□□ 1.07
VARS2-206ENST00000473916 MED23Q9ULK4 1368 aa21.76■■□□□ 1.07
VARS2-206ENST00000473916 ABCC12Q96J65 1359 aa21.75■■□□□ 1.07
VARS2-206ENST00000473916 HIP1O00291 1037 aa21.75■■□□□ 1.07
VARS2-206ENST00000473916 TRIM37O94972 964 aa21.75■■□□□ 1.07
VARS2-206ENST00000473916 IFIT1P09914 478 aaKnown RBP21.75■■□□□ 1.07
VARS2-206ENST00000473916 SEC62Q99442 399 aaKnown RBP21.75■■□□□ 1.07
VARS2-206ENST00000473916 SNRKQ9NRH2 765 aa21.75■■□□□ 1.07
VARS2-206ENST00000473916 SNX14Q9Y5W7 946 aa21.75■■□□□ 1.07
VARS2-206ENST00000473916 CCDC171Q6TFL3 1326 aa21.75■■□□□ 1.07
VARS2-206ENST00000473916 AKAP11Q9UKA4 1901 aa21.75■■□□□ 1.07
VARS2-206ENST00000473916 DDIT3P35638 169 aa21.75■■□□□ 1.07
VARS2-206ENST00000473916 ANAPC15P60006 121 aa21.75■■□□□ 1.07
VARS2-206ENST00000473916 FAM196AQ6ZSG2 479 aa21.75■■□□□ 1.07
VARS2-206ENST00000473916 SNAP23O00161 211 aa21.74■■□□□ 1.07
VARS2-206ENST00000473916 PI16Q6UXB8 463 aa21.74■■□□□ 1.07
VARS2-206ENST00000473916 IL17RAQ96F46 866 aa21.74■■□□□ 1.07
VARS2-206ENST00000473916 UBR3Q6ZT12 1888 aa21.74■■□□□ 1.07
VARS2-206ENST00000473916 EPB41L2O43491 1005 aaKnown RBP21.73■■□□□ 1.07
VARS2-206ENST00000473916 ST18O60284 1047 aa21.73■■□□□ 1.07
VARS2-206ENST00000473916 GORABQ5T7V8 394 aa21.73■■□□□ 1.07
VARS2-206ENST00000473916 CCDC129Q6ZRS4 1044 aa21.73■■□□□ 1.07
VARS2-206ENST00000473916 CCDC24Q8N4L8 307 aa21.73■■□□□ 1.07
VARS2-206ENST00000473916 KBTBD3Q8NAB2 608 aa21.73■■□□□ 1.07
VARS2-206ENST00000473916 ZPR1O75312 459 aa21.73■■□□□ 1.07
VARS2-206ENST00000473916 FRAT2O75474 233 aaPredicted RBP21.73■■□□□ 1.07
VARS2-206ENST00000473916 CCDC152Q4G0S7 254 aa21.73■■□□□ 1.07
VARS2-206ENST00000473916 TTC39AQ5SRH9 613 aa21.73■■□□□ 1.07
VARS2-206ENST00000473916 PRPF40BQ6NWY9 871 aaKnown RBP21.73■■□□□ 1.07
VARS2-206ENST00000473916 MYO5AQ9Y4I1 1855 aaKnown RBP21.73■■□□□ 1.07
VARS2-206ENST00000473916 ARAP2Q8WZ64 1704 aa21.72■■□□□ 1.07
VARS2-206ENST00000473916 PDE8BO95263 885 aa21.72■■□□□ 1.07
VARS2-206ENST00000473916 TAF5LO75529 589 aa21.72■■□□□ 1.07
VARS2-206ENST00000473916 FKBP4Q02790 459 aaKnown RBP eCLIP21.72■■□□□ 1.07
VARS2-206ENST00000473916 NOL8Q76FK4 1167 aaKnown RBP21.72■■□□□ 1.07
VARS2-206ENST00000473916 RBM8AQ9Y5S9 174 aaKnown RBP21.72■■□□□ 1.07
VARS2-206ENST00000473916 HSP90AA1P07900 732 aaKnown RBP21.71■■□□□ 1.07
VARS2-206ENST00000473916 CCDC158Q5M9N0 1113 aa21.71■■□□□ 1.07
VARS2-206ENST00000473916 RFX7Q2KHR2 1363 aa21.71■■□□□ 1.07
VARS2-206ENST00000473916 A0A1B0GUL6 1792 aa21.7■■□□□ 1.07
VARS2-206ENST00000473916 MPHOSPH8Q99549 860 aa21.7■■□□□ 1.06
VARS2-206ENST00000473916 CPA1P15085 419 aa21.7■■□□□ 1.06
VARS2-206ENST00000473916 MAP4K1Q92918 833 aa21.7■■□□□ 1.06
VARS2-206ENST00000473916 SETDB2Q96T68 719 aa21.7■■□□□ 1.06
VARS2-206ENST00000473916 RTL9Q8NET4 1388 aa21.7■■□□□ 1.06
VARS2-206ENST00000473916 MYH7P12883 1935 aa21.69■■□□□ 1.06
VARS2-206ENST00000473916 ZAP70P43403 619 aa21.69■■□□□ 1.06
VARS2-206ENST00000473916 NECTIN1Q15223 517 aa21.69■■□□□ 1.06
VARS2-206ENST00000473916 ADCK5Q3MIX3 580 aa21.69■■□□□ 1.06
VARS2-206ENST00000473916 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.69■■□□□ 1.06
VARS2-206ENST00000473916 TAF6LQ9Y6J9 622 aa21.69■■□□□ 1.06
VARS2-206ENST00000473916 MROH5Q6ZUA9 1318 aa21.69■■□□□ 1.06
VARS2-206ENST00000473916 FGFR2P21802 821 aa21.68■■□□□ 1.06
VARS2-206ENST00000473916 MCAMP43121 646 aa21.68■■□□□ 1.06
VARS2-206ENST00000473916 COL9A3Q14050 684 aaPredicted RBP21.68■■□□□ 1.06
VARS2-206ENST00000473916 CHMP5Q9NZZ3 219 aa21.68■■□□□ 1.06
VARS2-206ENST00000473916 GTF2E1P29083 439 aaPredicted RBP21.68■■□□□ 1.06
VARS2-206ENST00000473916 RFC4P35249 363 aa21.68■■□□□ 1.06
VARS2-206ENST00000473916 PHKA1P46020 1223 aa21.68■■□□□ 1.06
VARS2-206ENST00000473916 TRAPPC3LQ5T215 181 aa21.68■■□□□ 1.06
VARS2-206ENST00000473916 NBPF5PQ86XG9 351 aaPredicted RBP21.68■■□□□ 1.06
VARS2-206ENST00000473916 TNRC6CQ9HCJ0 1690 aaKnown RBP21.68■■□□□ 1.06
VARS2-206ENST00000473916 PUM3Q15397 648 aaKnown RBP21.67■■□□□ 1.06
VARS2-206ENST00000473916 RGL2O15211 777 aa21.67■■□□□ 1.06
VARS2-206ENST00000473916 IGHMBP2P38935 993 aaKnown RBP21.67■■□□□ 1.06
VARS2-206ENST00000473916 RBM6P78332 1123 aaKnown RBP21.67■■□□□ 1.06
VARS2-206ENST00000473916 CREB3L3Q68CJ9 461 aa21.67■■□□□ 1.06
VARS2-206ENST00000473916 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.66■■□□□ 1.06
VARS2-206ENST00000473916 KCNJ4P48050 445 aa21.66■■□□□ 1.06
VARS2-206ENST00000473916 MCMDC2Q4G0Z9 681 aa21.66■■□□□ 1.06
VARS2-206ENST00000473916 ZGPATQ8N5A5 531 aaKnown RBP21.66■■□□□ 1.06
VARS2-206ENST00000473916 KCNB2Q92953 911 aa21.66■■□□□ 1.06
VARS2-206ENST00000473916 WTIPA6NIX2 430 aaPredicted RBP21.65■■□□□ 1.06
VARS2-206ENST00000473916 HSP90B1P14625 803 aaKnown RBP21.65■■□□□ 1.06
VARS2-206ENST00000473916 SF3B3Q15393 1217 aaKnown RBP21.65■■□□□ 1.06
VARS2-206ENST00000473916 CCDC102BQ68D86 513 aa21.65■■□□□ 1.06
VARS2-206ENST00000473916 PROM2Q8N271 834 aa21.65■■□□□ 1.06
VARS2-206ENST00000473916 TMX3Q96JJ7 454 aa21.65■■□□□ 1.06
VARS2-206ENST00000473916 SLC27A2O14975 620 aa21.65■■□□□ 1.06
VARS2-206ENST00000473916 CASTP20810 708 aaKnown RBP21.65■■□□□ 1.06
VARS2-206ENST00000473916 CHRNDQ07001 517 aa21.65■■□□□ 1.06
VARS2-206ENST00000473916 LPIN2Q92539 896 aa21.65■■□□□ 1.06
VARS2-206ENST00000473916 LARP6Q9BRS8 491 aaKnown RBP21.65■■□□□ 1.06
VARS2-206ENST00000473916 SLC10A5Q5PT55 438 aa21.64■■□□□ 1.05
VARS2-206ENST00000473916 ZMYM1Q5SVZ6 1142 aa21.64■■□□□ 1.05
VARS2-206ENST00000473916 ZNF772Q68DY9 489 aaPredicted RBP21.64■■□□□ 1.05
VARS2-206ENST00000473916 JAKMIP1Q96N16 626 aaKnown RBP21.64■■□□□ 1.05
VARS2-206ENST00000473916 VPS53Q5VIR6 699 aa21.63■■□□□ 1.05
VARS2-206ENST00000473916 CELF1Q92879 486 aaKnown RBP21.63■■□□□ 1.05
VARS2-206ENST00000473916 TTC14Q96N46 770 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms