RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 ZNF428Q96B54 188 aa21.44■■□□□ 1.02
HPS4-210ENST00000473782 R3HDMLQ9H3Y0 253 aa21.44■■□□□ 1.02
HPS4-210ENST00000473782 HDAC9Q9UKV0 1011 aa21.44■■□□□ 1.02
HPS4-210ENST00000473782 CENPFP49454 3210 aa21.44■■□□□ 1.02
HPS4-210ENST00000473782 SH3TC1Q8TE82 1336 aa21.44■■□□□ 1.02
HPS4-210ENST00000473782 GPR25O00155 361 aa21.43■■□□□ 1.02
HPS4-210ENST00000473782 TM4SF4P48230 202 aa21.43■■□□□ 1.02
HPS4-210ENST00000473782 ZNF280AP59817 542 aaPredicted RBP21.43■■□□□ 1.02
HPS4-210ENST00000473782 SCARF1Q14162 830 aa21.43■■□□□ 1.02
HPS4-210ENST00000473782 NOM1Q5C9Z4 860 aaKnown RBP21.43■■□□□ 1.02
HPS4-210ENST00000473782 COPS6Q7L5N1 327 aa21.43■■□□□ 1.02
HPS4-210ENST00000473782 EIF2S2P20042 333 aaKnown RBP21.42■■□□□ 1.02
HPS4-210ENST00000473782 FKBP1BP68106 108 aa21.42■■□□□ 1.02
HPS4-210ENST00000473782 TBC1D16Q8TBP0 767 aa21.42■■□□□ 1.02
HPS4-210ENST00000473782 SCAF8Q9UPN6 1271 aaKnown RBP21.42■■□□□ 1.02
HPS4-210ENST00000473782 PAPPA2Q9BXP8 1791 aa21.41■■□□□ 1.02
HPS4-210ENST00000473782 C6orf229H3BNL8 230 aa21.41■■□□□ 1.02
HPS4-210ENST00000473782 SF3B3Q15393 1217 aaKnown RBP21.41■■□□□ 1.02
HPS4-210ENST00000473782 XAGE3Q8WTP9 111 aa21.41■■□□□ 1.02
HPS4-210ENST00000473782 ZNF609O15014 1411 aa21.4■■□□□ 1.02
HPS4-210ENST00000473782 UBE2Q2LH0YL09 131 aa21.4■■□□□ 1.02
HPS4-210ENST00000473782 HSP90AB3PQ58FF7 597 aa21.4■■□□□ 1.02
HPS4-210ENST00000473782 GMLQ99445 158 aa21.4■■□□□ 1.02
HPS4-210ENST00000473782 DDX60Q8IY21 1712 aaKnown RBP21.4■■□□□ 1.02
HPS4-210ENST00000473782 AIMP1Q12904 312 aaKnown RBP21.39■■□□□ 1.01
HPS4-210ENST00000473782 NFE2L2Q16236 605 aa21.39■■□□□ 1.01
HPS4-210ENST00000473782 POTEFA5A3E0 1075 aa21.38■■□□□ 1.01
HPS4-210ENST00000473782 FXR1P51114 621 aaKnown RBP eCLIP21.38■■□□□ 1.01
HPS4-210ENST00000473782 PRAMEF18Q5VWM3 479 aa21.38■■□□□ 1.01
HPS4-210ENST00000473782 CFHR5Q9BXR6 569 aa21.38■■□□□ 1.01
HPS4-210ENST00000473782 SZT2Q5T011 3432 aa21.37■■□□□ 1.01
HPS4-210ENST00000473782 EYA3Q99504 573 aa21.37■■□□□ 1.01
HPS4-210ENST00000473782 RSBN1LQ6PCB5 846 aaPredicted RBP21.36■■□□□ 1.01
HPS4-210ENST00000473782 FAM89AQ96GI7 184 aa21.36■■□□□ 1.01
HPS4-210ENST00000473782 PODXL2Q9NZ53 605 aa21.36■■□□□ 1.01
HPS4-210ENST00000473782 TSPYL4Q9UJ04 414 aa21.36■■□□□ 1.01
HPS4-210ENST00000473782 PITPNM2Q9BZ72 1349 aa21.35■■□□□ 1.01
HPS4-210ENST00000473782 AGBL3Q8NEM8 1001 aa21.35■■□□□ 1.01
HPS4-210ENST00000473782 NECTIN2Q92692 538 aa21.35■■□□□ 1.01
HPS4-210ENST00000473782 ISCA1Q9BUE6 129 aa21.35■■□□□ 1.01
HPS4-210ENST00000473782 FKTNO75072 461 aa21.34■■□□□ 1.01
HPS4-210ENST00000473782 ZC3H12CQ9C0D7 883 aaKnown RBP21.34■■□□□ 1.01
HPS4-210ENST00000473782 MYOZ2Q9NPC6 264 aa21.34■■□□□ 1.01
HPS4-210ENST00000473782 RPS8P62241 208 aaKnown RBP21.33■■□□□ 1.01
HPS4-210ENST00000473782 MKRN3Q13064 507 aaKnown RBP21.33■■□□□ 1.01
HPS4-210ENST00000473782 NBPF9Q3BBW0 867 aa21.31■■□□□ 1
HPS4-210ENST00000473782 SEC31BQ9NQW1 1179 aa21.31■■□□□ 1
HPS4-210ENST00000473782 USP17L8P0C7I0 530 aa21.3■■□□□ 1
HPS4-210ENST00000473782 PTPN12Q05209 780 aaKnown RBP21.3■■□□□ 1
HPS4-210ENST00000473782 KRT24Q2M2I5 525 aa21.3■■□□□ 1
HPS4-210ENST00000473782 ATP5J2-PTCD1G3V325 749 aa21.29■■□□□ 1
HPS4-210ENST00000473782 UFL1O94874 794 aa21.29■■□□□ 1
HPS4-210ENST00000473782 RTL5Q5HYW3 569 aaPredicted RBP21.29■■□□□ 1
HPS4-210ENST00000473782 PSME4Q14997 1843 aa21.28■■□□□ 1
HPS4-210ENST00000473782 WTIPA6NIX2 430 aaPredicted RBP21.28■■□□□ 1
HPS4-210ENST00000473782 OTOP1Q7RTM1 612 aa21.28■■□□□ 1
HPS4-210ENST00000473782 PLBD2Q8NHP8 589 aa21.28■■□□□ 1
HPS4-210ENST00000473782 KIAA0100Q14667 2235 aaKnown RBP21.28■■□□□ 1
HPS4-210ENST00000473782 BABAM1Q9NWV8 329 aa21.27■■□□□ 1
HPS4-210ENST00000473782 GGA1Q9UJY5 639 aa21.27■■□□□ 1
HPS4-210ENST00000473782 IRS4O14654 1257 aaPredicted RBP21.26■□□□□ 0.99
HPS4-210ENST00000473782 EN2P19622 333 aaPredicted RBP21.26■□□□□ 0.99
HPS4-210ENST00000473782 CAP1Q01518 475 aa21.26■□□□□ 0.99
HPS4-210ENST00000473782 SREBF2Q12772 1141 aa21.26■□□□□ 0.99
HPS4-210ENST00000473782 LDLRAD1Q5T700 205 aa21.26■□□□□ 0.99
HPS4-210ENST00000473782 SPRYD7Q5W111 196 aa21.26■□□□□ 0.99
HPS4-210ENST00000473782 INTS3Q68E01 1043 aaKnown RBP21.26■□□□□ 0.99
HPS4-210ENST00000473782 MXD3Q9BW11 206 aa21.26■□□□□ 0.99
HPS4-210ENST00000473782 CHPF2Q9P2E5 772 aa21.26■□□□□ 0.99
HPS4-210ENST00000473782 TRIM17Q9Y577 477 aa21.26■□□□□ 0.99
HPS4-210ENST00000473782 WNT10BO00744 389 aa21.25■□□□□ 0.99
HPS4-210ENST00000473782 NEFMP07197 916 aa21.25■□□□□ 0.99
HPS4-210ENST00000473782 TRIM28Q13263 835 aaKnown RBP21.25■□□□□ 0.99
HPS4-210ENST00000473782 ANKRD13DQ6ZTN6 518 aa21.25■□□□□ 0.99
HPS4-210ENST00000473782 ANKIB1Q9P2G1 1089 aa21.25■□□□□ 0.99
HPS4-210ENST00000473782 USP17L3A6NCW0 530 aa21.24■□□□□ 0.99
HPS4-210ENST00000473782 USP17L4A6NCW7 530 aa21.24■□□□□ 0.99
HPS4-210ENST00000473782 TTLL12Q14166 644 aaPredicted RBP21.24■□□□□ 0.99
HPS4-210ENST00000473782 USP17L1Q7RTZ2 530 aa21.24■□□□□ 0.99
HPS4-210ENST00000473782 COLQQ9Y215 455 aaPredicted RBP21.24■□□□□ 0.99
HPS4-210ENST00000473782 G3V3G9 751 aa21.23■□□□□ 0.99
HPS4-210ENST00000473782 DCAF8Q5TAQ9 597 aa21.23■□□□□ 0.99
HPS4-210ENST00000473782 FZD1Q9UP38 647 aa21.23■□□□□ 0.99
HPS4-210ENST00000473782 RBBP6Q7Z6E9 1792 aaKnown RBP21.23■□□□□ 0.99
HPS4-210ENST00000473782 ZNF646O15015 1829 aaPredicted RBP21.22■□□□□ 0.99
HPS4-210ENST00000473782 DACT2Q5SW24 774 aa21.22■□□□□ 0.99
HPS4-210ENST00000473782 PODNQ7Z5L7 613 aa21.22■□□□□ 0.99
HPS4-210ENST00000473782 IFNL1Q8IU54 200 aa21.22■□□□□ 0.99
HPS4-210ENST00000473782 ARMC5Q96C12 935 aa21.22■□□□□ 0.99
HPS4-210ENST00000473782 PTPN22Q9Y2R2 807 aa21.22■□□□□ 0.99
HPS4-210ENST00000473782 RANBP2P49792 3224 aaKnown RBP21.22■□□□□ 0.99
HPS4-210ENST00000473782 IGF2BP3O00425 579 aaKnown RBP eCLIP21.21■□□□□ 0.99
HPS4-210ENST00000473782 RIPK4P57078 832 aa21.21■□□□□ 0.99
HPS4-210ENST00000473782 PRKG1Q13976 671 aa21.21■□□□□ 0.99
HPS4-210ENST00000473782 ALDH1A1P00352 501 aa21.2■□□□□ 0.98
HPS4-210ENST00000473782 TRIOBPQ9H2D6 2365 aa21.19■□□□□ 0.98
HPS4-210ENST00000473782 CHL1O00533 1208 aa21.19■□□□□ 0.98
HPS4-210ENST00000473782 ZBTB38Q8NAP3 1195 aaPredicted RBP21.19■□□□□ 0.98
HPS4-210ENST00000473782 ZBED3Q96IU2 234 aaPredicted RBP21.19■□□□□ 0.98
HPS4-210ENST00000473782 SASH1O94885 1247 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms