RNA–Protein interactions for RNA: ENST00000473686.5

EFCAB2-208, Transcript of EF-hand calcium binding domain 2, human

TSL 5

Gene EFCAB2, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB2-208	ENST00000473686	DCPS	Q96C86	337 aa	Known RBP	13.78	□□□□□ -0.2
EFCAB2-208	ENST00000473686	PLEKHF1	Q96S99	279 aa		13.78	□□□□□ -0.2
EFCAB2-208	ENST00000473686	PCDH10	Q9P2E7	1040 aa		13.78	□□□□□ -0.2
EFCAB2-208	ENST00000473686	C6orf229	H3BNL8	230 aa		13.77	□□□□□ -0.21
EFCAB2-208	ENST00000473686	TRPA1	O75762	1119 aa		13.77	□□□□□ -0.21
EFCAB2-208	ENST00000473686	PDIA6	Q15084	440 aa		13.77	□□□□□ -0.21
EFCAB2-208	ENST00000473686	COPS6	Q7L5N1	327 aa		13.77	□□□□□ -0.21
EFCAB2-208	ENST00000473686	TMC4	Q7Z404	712 aa		13.77	□□□□□ -0.21
EFCAB2-208	ENST00000473686	LRP10	Q7Z4F1	713 aa		13.77	□□□□□ -0.21
EFCAB2-208	ENST00000473686	PNN	Q9H307	717 aa	Known RBP	13.77	□□□□□ -0.21
EFCAB2-208	ENST00000473686	SAGE1	Q9NXZ1	904 aa		13.77	□□□□□ -0.21
EFCAB2-208	ENST00000473686	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.77	□□□□□ -0.21
EFCAB2-208	ENST00000473686	ECE2	O60344	883 aa		13.76	□□□□□ -0.21
EFCAB2-208	ENST00000473686	KIF23	Q02241	960 aa	Predicted RBP	13.76	□□□□□ -0.21
EFCAB2-208	ENST00000473686	DPF2	Q92785	391 aa		13.76	□□□□□ -0.21
EFCAB2-208	ENST00000473686	CCDC102A	Q96A19	550 aa		13.76	□□□□□ -0.21
EFCAB2-208	ENST00000473686	GGA3	Q9NZ52	723 aa		13.76	□□□□□ -0.21
EFCAB2-208	ENST00000473686	SCN9A	Q15858	1988 aa		13.76	□□□□□ -0.21
EFCAB2-208	ENST00000473686	FAM155A	B1AL88	458 aa	Predicted RBP	13.75	□□□□□ -0.21
EFCAB2-208	ENST00000473686		G3V3G9	751 aa		13.75	□□□□□ -0.21
EFCAB2-208	ENST00000473686	EGFR	P00533	1210 aa		13.75	□□□□□ -0.21
EFCAB2-208	ENST00000473686	DOK7	Q18PE1	504 aa		13.75	□□□□□ -0.21
EFCAB2-208	ENST00000473686	KIF4B	Q2VIQ3	1234 aa		13.75	□□□□□ -0.21
EFCAB2-208	ENST00000473686	DCAF8	Q5TAQ9	597 aa		13.75	□□□□□ -0.21
EFCAB2-208	ENST00000473686	SULF1	Q8IWU6	871 aa		13.75	□□□□□ -0.21
EFCAB2-208	ENST00000473686	EYA3	Q99504	573 aa		13.75	□□□□□ -0.21
EFCAB2-208	ENST00000473686	RPS12	P25398	132 aa	Known RBP	13.74	□□□□□ -0.21
EFCAB2-208	ENST00000473686	RIPK4	P57078	832 aa		13.74	□□□□□ -0.21
EFCAB2-208	ENST00000473686	TCIRG1	Q13488	830 aa		13.74	□□□□□ -0.21
EFCAB2-208	ENST00000473686	RTL5	Q5HYW3	569 aa	Predicted RBP	13.74	□□□□□ -0.21
EFCAB2-208	ENST00000473686	CELF1	Q92879	486 aa	Known RBP	13.74	□□□□□ -0.21
EFCAB2-208	ENST00000473686	RNF186	Q9NXI6	227 aa		13.74	□□□□□ -0.21
EFCAB2-208	ENST00000473686	COL4A1	P02462	1669 aa		13.74	□□□□□ -0.21
EFCAB2-208	ENST00000473686	PSME4	Q14997	1843 aa		13.74	□□□□□ -0.21
EFCAB2-208	ENST00000473686	SLC10A3	P09131	477 aa		13.73	□□□□□ -0.21
EFCAB2-208	ENST00000473686	PRKAR2A	P13861	404 aa	Known RBP	13.73	□□□□□ -0.21
EFCAB2-208	ENST00000473686	GPSM2	P81274	684 aa		13.73	□□□□□ -0.21
EFCAB2-208	ENST00000473686	PAPPA2	Q9BXP8	1791 aa		13.73	□□□□□ -0.21
EFCAB2-208	ENST00000473686	RTL9	Q8NET4	1388 aa		13.72	□□□□□ -0.21
EFCAB2-208	ENST00000473686	POTEM	A6NI47	508 aa		13.72	□□□□□ -0.21
EFCAB2-208	ENST00000473686	LMOD3	Q0VAK6	560 aa		13.72	□□□□□ -0.21
EFCAB2-208	ENST00000473686	CTU1	Q7Z7A3	348 aa	Known RBP	13.72	□□□□□ -0.21
EFCAB2-208	ENST00000473686	CDCA5	Q96FF9	252 aa		13.72	□□□□□ -0.21
EFCAB2-208	ENST00000473686	FAM89A	Q96GI7	184 aa		13.72	□□□□□ -0.21
EFCAB2-208	ENST00000473686	KCNQ5	Q9NR82	932 aa		13.72	□□□□□ -0.21
EFCAB2-208	ENST00000473686	CHPF2	Q9P2E5	772 aa		13.72	□□□□□ -0.21
EFCAB2-208	ENST00000473686	POLL	Q9UGP5	575 aa		13.72	□□□□□ -0.21
EFCAB2-208	ENST00000473686	LAS1L	Q9Y4W2	734 aa	Known RBP	13.72	□□□□□ -0.21
EFCAB2-208	ENST00000473686	SPEF2	Q9C093	1822 aa		13.71	□□□□□ -0.21
EFCAB2-208	ENST00000473686	ATP5J2-PTCD1	G3V325	749 aa		13.71	□□□□□ -0.21
EFCAB2-208	ENST00000473686	ASTN2	O75129	1339 aa	Predicted RBP	13.7	□□□□□ -0.22
EFCAB2-208	ENST00000473686	SPDYE2B	A6NHP3	402 aa		13.7	□□□□□ -0.22
EFCAB2-208	ENST00000473686	UFL1	O94874	794 aa		13.7	□□□□□ -0.22
EFCAB2-208	ENST00000473686	SPDYE6	P0CI01	402 aa		13.7	□□□□□ -0.22
EFCAB2-208	ENST00000473686	NEUROD2	Q15784	382 aa		13.7	□□□□□ -0.22
EFCAB2-208	ENST00000473686	KRT24	Q2M2I5	525 aa		13.7	□□□□□ -0.22
EFCAB2-208	ENST00000473686	SPDYE2	Q495Y8	402 aa		13.7	□□□□□ -0.22
EFCAB2-208	ENST00000473686	HDGFL1	Q5TGJ6	251 aa		13.7	□□□□□ -0.22
EFCAB2-208	ENST00000473686	RASAL3	Q86YV0	1011 aa		13.7	□□□□□ -0.22
EFCAB2-208	ENST00000473686	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.7	□□□□□ -0.22
EFCAB2-208	ENST00000473686	BABAM1	Q9NWV8	329 aa		13.7	□□□□□ -0.22
EFCAB2-208	ENST00000473686	ANKIB1	Q9P2G1	1089 aa		13.7	□□□□□ -0.22
EFCAB2-208	ENST00000473686	HDAC9	Q9UKV0	1011 aa		13.7	□□□□□ -0.22
EFCAB2-208	ENST00000473686	ANGEL2	Q5VTE6	544 aa	Known RBP	13.69	□□□□□ -0.22
EFCAB2-208	ENST00000473686	PRPF38B	Q5VTL8	546 aa	Known RBP	13.69	□□□□□ -0.22
EFCAB2-208	ENST00000473686	PLBD2	Q8NHP8	589 aa		13.69	□□□□□ -0.22
EFCAB2-208	ENST00000473686	TBC1D16	Q8TBP0	767 aa		13.69	□□□□□ -0.22
EFCAB2-208	ENST00000473686	CSRNP1	Q96S65	589 aa		13.69	□□□□□ -0.22
EFCAB2-208	ENST00000473686	IRS4	O14654	1257 aa	Predicted RBP	13.68	□□□□□ -0.22
EFCAB2-208	ENST00000473686	SF3B3	Q15393	1217 aa	Known RBP	13.68	□□□□□ -0.22
EFCAB2-208	ENST00000473686	GGA1	Q9UJY5	639 aa		13.68	□□□□□ -0.22
EFCAB2-208	ENST00000473686	HPS5	Q9UPZ3	1129 aa		13.68	□□□□□ -0.22
EFCAB2-208	ENST00000473686	TMPO	P42166	694 aa	Known RBP	13.67	□□□□□ -0.22
EFCAB2-208	ENST00000473686	RPS8	P62241	208 aa	Known RBP	13.67	□□□□□ -0.22
EFCAB2-208	ENST00000473686	SCARF1	Q14162	830 aa		13.67	□□□□□ -0.22
EFCAB2-208	ENST00000473686	TTLL12	Q14166	644 aa	Predicted RBP	13.67	□□□□□ -0.22
EFCAB2-208	ENST00000473686	ANKRD13D	Q6ZTN6	518 aa		13.67	□□□□□ -0.22
EFCAB2-208	ENST00000473686	VIL1	P09327	827 aa	Known RBP	13.66	□□□□□ -0.22
EFCAB2-208	ENST00000473686	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.66	□□□□□ -0.22
EFCAB2-208	ENST00000473686	CCDC146	Q8IYE0	955 aa		13.66	□□□□□ -0.22
EFCAB2-208	ENST00000473686	ISCA1	Q9BUE6	129 aa		13.66	□□□□□ -0.22
EFCAB2-208	ENST00000473686	SCAF8	Q9UPN6	1271 aa	Known RBP	13.66	□□□□□ -0.22
EFCAB2-208	ENST00000473686	MYH3	P11055	1940 aa		13.65	□□□□□ -0.22
EFCAB2-208	ENST00000473686	TBC1D8	O95759	1140 aa		13.65	□□□□□ -0.22
EFCAB2-208	ENST00000473686	FKBP1B	P68106	108 aa		13.65	□□□□□ -0.22
EFCAB2-208	ENST00000473686	MKRN4P	Q13434	485 aa	Predicted RBP	13.65	□□□□□ -0.22
EFCAB2-208	ENST00000473686	FBXW7	Q969H0	707 aa		13.65	□□□□□ -0.22
EFCAB2-208	ENST00000473686	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.65	□□□□□ -0.22
EFCAB2-208	ENST00000473686	MYOZ2	Q9NPC6	264 aa		13.65	□□□□□ -0.22
EFCAB2-208	ENST00000473686	SEC31B	Q9NQW1	1179 aa		13.65	□□□□□ -0.22
EFCAB2-208	ENST00000473686	DBF4	Q9UBU7	674 aa	Predicted RBP	13.65	□□□□□ -0.22
EFCAB2-208	ENST00000473686	USP17L8	P0C7I0	530 aa		13.64	□□□□□ -0.23
EFCAB2-208	ENST00000473686	GOLGA2	Q08379	1002 aa		13.64	□□□□□ -0.23
EFCAB2-208	ENST00000473686	MKRN3	Q13064	507 aa	Known RBP	13.64	□□□□□ -0.23
EFCAB2-208	ENST00000473686	PKN2	Q16513	984 aa	Known RBP	13.64	□□□□□ -0.23
EFCAB2-208	ENST00000473686	MOB2	Q70IA6	237 aa		13.64	□□□□□ -0.23
EFCAB2-208	ENST00000473686	RIC3	Q7Z5B4	369 aa		13.64	□□□□□ -0.23
EFCAB2-208	ENST00000473686	AGBL3	Q8NEM8	1001 aa		13.64	□□□□□ -0.23
EFCAB2-208	ENST00000473686	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.64	□□□□□ -0.23
EFCAB2-208	ENST00000473686	ZNF609	O15014	1411 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms