RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 NRLP54845 237 aa10.13□□□□□ -0.79
SEC22A-204ENST00000473494 PLAURQ03405 335 aa10.13□□□□□ -0.79
SEC22A-204ENST00000473494 NEUROD1Q13562 356 aa10.13□□□□□ -0.79
SEC22A-204ENST00000473494 GRM2Q14416 872 aa10.13□□□□□ -0.79
SEC22A-204ENST00000473494 PRPF40BQ6NWY9 871 aaKnown RBP10.13□□□□□ -0.79
SEC22A-204ENST00000473494 FOXR1Q6PIV2 292 aa10.13□□□□□ -0.79
SEC22A-204ENST00000473494 BCO2Q9BYV7 579 aa10.13□□□□□ -0.79
SEC22A-204ENST00000473494 LATS2Q9NRM7 1088 aa10.13□□□□□ -0.79
SEC22A-204ENST00000473494 A0A1W2PP55 124 aa10.12□□□□□ -0.79
SEC22A-204ENST00000473494 GPR25O00155 361 aa10.12□□□□□ -0.79
SEC22A-204ENST00000473494 GADD45BO75293 160 aaPredicted RBP10.12□□□□□ -0.79
SEC22A-204ENST00000473494 GPLD1P80108 840 aa10.12□□□□□ -0.79
SEC22A-204ENST00000473494 DHX32Q7L7V1 743 aaKnown RBP10.12□□□□□ -0.79
SEC22A-204ENST00000473494 METTL16Q86W50 562 aaKnown RBP10.12□□□□□ -0.79
SEC22A-204ENST00000473494 GLIS3Q8NEA6 775 aa10.12□□□□□ -0.79
SEC22A-204ENST00000473494 USP17L7P0C7H9 530 aa10.11□□□□□ -0.79
SEC22A-204ENST00000473494 HYAL2Q12891 473 aa10.11□□□□□ -0.79
SEC22A-204ENST00000473494 COL13A1Q5TAT6 717 aaPredicted RBP10.11□□□□□ -0.79
SEC22A-204ENST00000473494 ZNF468Q5VIY5 522 aaPredicted RBP10.11□□□□□ -0.79
SEC22A-204ENST00000473494 SV2AQ7L0J3 742 aa10.11□□□□□ -0.79
SEC22A-204ENST00000473494 C8orf37Q96NL8 207 aa10.11□□□□□ -0.79
SEC22A-204ENST00000473494 CNTNAP3BQ96NU0 1288 aa10.11□□□□□ -0.79
SEC22A-204ENST00000473494 CNTNAP3Q9BZ76 1288 aa10.11□□□□□ -0.79
SEC22A-204ENST00000473494 AVENQ9NQS1 362 aaPredicted RBP10.11□□□□□ -0.79
SEC22A-204ENST00000473494 TRAK1Q9UPV9 953 aa10.11□□□□□ -0.79
SEC22A-204ENST00000473494 ZNF76P36508 570 aa10.1□□□□□ -0.79
SEC22A-204ENST00000473494 CTBSQ01459 385 aa10.1□□□□□ -0.79
SEC22A-204ENST00000473494 NXPE4Q6UWF7 544 aa10.1□□□□□ -0.79
SEC22A-204ENST00000473494 VWA5B2Q8N398 1253 aa10.1□□□□□ -0.79
SEC22A-204ENST00000473494 ST13P50502 369 aaKnown RBP10.09□□□□□ -0.79
SEC22A-204ENST00000473494 RAD51AP2Q09MP3 1159 aa10.09□□□□□ -0.79
SEC22A-204ENST00000473494 C3orf58Q8NDZ4 430 aa10.09□□□□□ -0.79
SEC22A-204ENST00000473494 TRPM4Q8TD43 1214 aa10.09□□□□□ -0.79
SEC22A-204ENST00000473494 GSTT1P30711 240 aa10.08□□□□□ -0.8
SEC22A-204ENST00000473494 NCAPG2Q86XI2 1143 aa10.08□□□□□ -0.8
SEC22A-204ENST00000473494 CEP120Q8N960 986 aa10.08□□□□□ -0.8
SEC22A-204ENST00000473494 RNF34Q969K3 372 aa10.08□□□□□ -0.8
SEC22A-204ENST00000473494 ZKSCAN3Q9BRR0 538 aa10.08□□□□□ -0.8
SEC22A-204ENST00000473494 EHD4Q9H223 541 aa10.08□□□□□ -0.8
SEC22A-204ENST00000473494 ABCB6Q9NP58 842 aa10.08□□□□□ -0.8
SEC22A-204ENST00000473494 USP31Q70CQ4 1352 aa10.08□□□□□ -0.8
SEC22A-204ENST00000473494 SIN3BO75182 1162 aa10.07□□□□□ -0.8
SEC22A-204ENST00000473494 ERCC5P28715 1186 aaPredicted RBP10.07□□□□□ -0.8
SEC22A-204ENST00000473494 ZC3H6P61129 1189 aaKnown RBP10.07□□□□□ -0.8
SEC22A-204ENST00000473494 GAS6Q14393 721 aa10.07□□□□□ -0.8
SEC22A-204ENST00000473494 NPAS3Q8IXF0 933 aa10.07□□□□□ -0.8
SEC22A-204ENST00000473494 ANKRD24Q8TF21 1146 aa10.07□□□□□ -0.8
SEC22A-204ENST00000473494 NSUN5Q96P11 429 aaKnown RBP10.07□□□□□ -0.8
SEC22A-204ENST00000473494 TCF12Q99081 682 aa10.07□□□□□ -0.8
SEC22A-204ENST00000473494 C2CD2LO14523 706 aa10.06□□□□□ -0.8
SEC22A-204ENST00000473494 ACPPP15309 386 aa10.06□□□□□ -0.8
SEC22A-204ENST00000473494 PTPN12Q05209 780 aaKnown RBP10.06□□□□□ -0.8
SEC22A-204ENST00000473494 MEI1Q5TIA1 1274 aa10.06□□□□□ -0.8
SEC22A-204ENST00000473494 SYT9Q86SS6 491 aa10.06□□□□□ -0.8
SEC22A-204ENST00000473494 NT5DC4Q86YG4 428 aa10.06□□□□□ -0.8
SEC22A-204ENST00000473494 CCNJLQ8IV13 435 aa10.06□□□□□ -0.8
SEC22A-204ENST00000473494 TNFRSF25Q93038 417 aa10.06□□□□□ -0.8
SEC22A-204ENST00000473494 BHLHE41Q9C0J9 482 aaPredicted RBP10.06□□□□□ -0.8
SEC22A-204ENST00000473494 DZANK1Q9NVP4 752 aa10.06□□□□□ -0.8
SEC22A-204ENST00000473494 PRR12Q9ULL5 1215 aa10.06□□□□□ -0.8
SEC22A-204ENST00000473494 VSIG8P0DPA2 414 aa10.05□□□□□ -0.8
SEC22A-204ENST00000473494 BMP4P12644 408 aa10.05□□□□□ -0.8
SEC22A-204ENST00000473494 PCSK7Q16549 785 aa10.05□□□□□ -0.8
SEC22A-204ENST00000473494 OSMRQ99650 979 aa10.05□□□□□ -0.8
SEC22A-204ENST00000473494 MDFIQ99750 246 aa10.05□□□□□ -0.8
SEC22A-204ENST00000473494 LIN7BQ9HAP6 207 aa10.05□□□□□ -0.8
SEC22A-204ENST00000473494 NXF1Q9UBU9 619 aaKnown RBP10.05□□□□□ -0.8
SEC22A-204ENST00000473494 PPM1HQ9ULR3 514 aa10.05□□□□□ -0.8
SEC22A-204ENST00000473494 ZBTB42B2RXF5 422 aa10.04□□□□□ -0.8
SEC22A-204ENST00000473494 H3BM21 787 aa10.04□□□□□ -0.8
SEC22A-204ENST00000473494 ARAFP10398 606 aa10.04□□□□□ -0.8
SEC22A-204ENST00000473494 XRCC5P13010 732 aaKnown RBP10.04□□□□□ -0.8
SEC22A-204ENST00000473494 MX2P20592 715 aa10.04□□□□□ -0.8
SEC22A-204ENST00000473494 TAF1CQ15572 869 aaPredicted RBP10.04□□□□□ -0.8
SEC22A-204ENST00000473494 OXCT2Q9BYC2 517 aaPredicted RBP10.04□□□□□ -0.8
SEC22A-204ENST00000473494 DNAJB12Q9NXW2 375 aaKnown RBP10.04□□□□□ -0.8
SEC22A-204ENST00000473494 NFKBIEO00221 500 aa10.03□□□□□ -0.8
SEC22A-204ENST00000473494 TMEM102Q8N9M5 508 aaPredicted RBP10.03□□□□□ -0.8
SEC22A-204ENST00000473494 UBE2OQ9C0C9 1292 aaKnown RBP10.03□□□□□ -0.8
SEC22A-204ENST00000473494 TGIF2Q9GZN2 237 aa10.03□□□□□ -0.8
SEC22A-204ENST00000473494 LOC102724428A0A0B4J2F2 783 aa10.02□□□□□ -0.81
SEC22A-204ENST00000473494 TMEM238LA0A1B0GVL6 79 aa10.02□□□□□ -0.81
SEC22A-204ENST00000473494 ITPKAP23677 461 aa10.02□□□□□ -0.81
SEC22A-204ENST00000473494 FCGRTP55899 365 aa10.02□□□□□ -0.81
SEC22A-204ENST00000473494 SIK1P57059 783 aa10.02□□□□□ -0.81
SEC22A-204ENST00000473494 C9orf131Q5VYM1 1079 aa10.02□□□□□ -0.81
SEC22A-204ENST00000473494 HS2ST1Q7LGA3 356 aa10.02□□□□□ -0.81
SEC22A-204ENST00000473494 SPACA7Q96KW9 195 aa10.02□□□□□ -0.81
SEC22A-204ENST00000473494 MBIPQ9NS73 344 aa10.02□□□□□ -0.81
SEC22A-204ENST00000473494 ADH6P28332 368 aa10.01□□□□□ -0.81
SEC22A-204ENST00000473494 MAP2K3P46734 347 aa10.01□□□□□ -0.81
SEC22A-204ENST00000473494 MLLT1Q03111 559 aaPredicted RBP10.01□□□□□ -0.81
SEC22A-204ENST00000473494 ERMP1Q7Z2K6 904 aa10.01□□□□□ -0.81
SEC22A-204ENST00000473494 HHIPQ96QV1 700 aa10.01□□□□□ -0.81
SEC22A-204ENST00000473494 PPP4R2Q9NY27 417 aa10.01□□□□□ -0.81
SEC22A-204ENST00000473494 NAGPAQ9UK23 515 aa10.01□□□□□ -0.81
SEC22A-204ENST00000473494 SLC6A14Q9UN76 642 aa10.01□□□□□ -0.81
SEC22A-204ENST00000473494 ADARB2-AS1A8MUL3 147 aa10□□□□□ -0.81
SEC22A-204ENST00000473494 GRIA4P48058 902 aa10□□□□□ -0.81
SEC22A-204ENST00000473494 PCBP4P57723 403 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms