RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 XDHP47989 1333 aa25.97■■□□□ 1.75
TOP3A-204ENST00000472959 YY1P25490 414 aa25.97■■□□□ 1.75
TOP3A-204ENST00000472959 IARSP41252 1262 aaKnown RBP25.97■■□□□ 1.75
TOP3A-204ENST00000472959 MTX1Q13505 466 aa25.97■■□□□ 1.75
TOP3A-204ENST00000472959 ZNF594Q96JF6 807 aaPredicted RBP25.97■■□□□ 1.75
TOP3A-204ENST00000472959 ANKRD2Q9GZV1 360 aa25.97■■□□□ 1.75
TOP3A-204ENST00000472959 COG6Q9Y2V7 657 aa25.97■■□□□ 1.75
TOP3A-204ENST00000472959 ZC3H4Q9UPT8 1303 aaKnown RBP25.96■■□□□ 1.75
TOP3A-204ENST00000472959 C20orf194Q5TEA3 1177 aa25.96■■□□□ 1.75
TOP3A-204ENST00000472959 LRRC37AA6NMS7 1700 aa25.96■■□□□ 1.75
TOP3A-204ENST00000472959 CHD4Q14839 1912 aa25.95■■□□□ 1.74
TOP3A-204ENST00000472959 TBC1D16Q8TBP0 767 aa25.95■■□□□ 1.74
TOP3A-204ENST00000472959 CNNM1Q9NRU3 951 aa25.95■■□□□ 1.74
TOP3A-204ENST00000472959 GGA1Q9UJY5 639 aa25.95■■□□□ 1.74
TOP3A-204ENST00000472959 C6orf229H3BNL8 230 aa25.94■■□□□ 1.74
TOP3A-204ENST00000472959 ATP2B4P23634 1241 aa25.94■■□□□ 1.74
TOP3A-204ENST00000472959 RFX5P48382 616 aaPredicted RBP25.94■■□□□ 1.74
TOP3A-204ENST00000472959 POLLQ9UGP5 575 aa25.94■■□□□ 1.74
TOP3A-204ENST00000472959 CHRNDQ07001 517 aa25.93■■□□□ 1.74
TOP3A-204ENST00000472959 EYA3Q99504 573 aa25.93■■□□□ 1.74
TOP3A-204ENST00000472959 SRGAP3O43295 1099 aa25.92■■□□□ 1.74
TOP3A-204ENST00000472959 PPIP5K2O43314 1243 aa25.92■■□□□ 1.74
TOP3A-204ENST00000472959 UFL1O94874 794 aa25.92■■□□□ 1.74
TOP3A-204ENST00000472959 KIAA2012Q0VF49 1180 aa25.92■■□□□ 1.74
TOP3A-204ENST00000472959 LARGE2Q8N3Y3 721 aa25.92■■□□□ 1.74
TOP3A-204ENST00000472959 JDP2Q8WYK2 163 aa25.92■■□□□ 1.74
TOP3A-204ENST00000472959 LEMD3Q9Y2U8 911 aa25.92■■□□□ 1.74
TOP3A-204ENST00000472959 PTPN12Q05209 780 aaKnown RBP25.91■■□□□ 1.74
TOP3A-204ENST00000472959 WASHC4Q2M389 1173 aa25.91■■□□□ 1.74
TOP3A-204ENST00000472959 FBXO3Q9UK99 471 aa25.91■■□□□ 1.74
TOP3A-204ENST00000472959 RIPOR2Q9Y4F9 1068 aa25.91■■□□□ 1.74
TOP3A-204ENST00000472959 AOC3Q16853 763 aa25.9■■□□□ 1.74
TOP3A-204ENST00000472959 PUS3Q9BZE2 481 aaKnown RBP25.9■■□□□ 1.74
TOP3A-204ENST00000472959 ZBTB40Q9NUA8 1239 aa25.9■■□□□ 1.74
TOP3A-204ENST00000472959 MROH5Q6ZUA9 1318 aa25.89■■□□□ 1.74
TOP3A-204ENST00000472959 SBF1O95248 1867 aa25.89■■□□□ 1.74
TOP3A-204ENST00000472959 KLHDC4Q8TBB5 520 aa25.89■■□□□ 1.74
TOP3A-204ENST00000472959 ZC3H12CQ9C0D7 883 aaKnown RBP25.89■■□□□ 1.74
TOP3A-204ENST00000472959 COPRSQ9NQ92 184 aa25.89■■□□□ 1.74
TOP3A-204ENST00000472959 DUOX1Q9NRD9 1551 aa25.88■■□□□ 1.73
TOP3A-204ENST00000472959 EYA2O00167 538 aa25.88■■□□□ 1.73
TOP3A-204ENST00000472959 ATP8B2P98198 1209 aa25.88■■□□□ 1.73
TOP3A-204ENST00000472959 NIM1KQ8IY84 436 aa25.88■■□□□ 1.73
TOP3A-204ENST00000472959 C1orf115Q9H7X2 142 aa25.88■■□□□ 1.73
TOP3A-204ENST00000472959 CIAO1O76071 339 aa25.87■■□□□ 1.73
TOP3A-204ENST00000472959 KCNJ4P48050 445 aa25.87■■□□□ 1.73
TOP3A-204ENST00000472959 LRRC24Q50LG9 513 aa25.87■■□□□ 1.73
TOP3A-204ENST00000472959 ZNF804BA4D1E1 1349 aa25.87■■□□□ 1.73
TOP3A-204ENST00000472959 LTBP1Q14766 1721 aa25.86■■□□□ 1.73
TOP3A-204ENST00000472959 FZD9O00144 591 aa25.86■■□□□ 1.73
TOP3A-204ENST00000472959 HELBQ8NG08 1087 aaPredicted RBP25.86■■□□□ 1.73
TOP3A-204ENST00000472959 PNMA6EA0A0J9YXQ4 647 aa25.85■■□□□ 1.73
TOP3A-204ENST00000472959 RIMBP2O15034 1052 aa25.85■■□□□ 1.73
TOP3A-204ENST00000472959 TAF5LO75529 589 aa25.85■■□□□ 1.73
TOP3A-204ENST00000472959 METTL24Q5JXM2 366 aa25.85■■□□□ 1.73
TOP3A-204ENST00000472959 DPY19L2Q6NUT2 758 aa25.85■■□□□ 1.73
TOP3A-204ENST00000472959 ZNRF3Q9ULT6 936 aa25.85■■□□□ 1.73
TOP3A-204ENST00000472959 POLA2Q14181 598 aa25.84■■□□□ 1.73
TOP3A-204ENST00000472959 CEP85Q6P2H3 762 aa25.84■■□□□ 1.73
TOP3A-204ENST00000472959 SSH3Q8TE77 659 aa25.84■■□□□ 1.73
TOP3A-204ENST00000472959 GPR101Q96P66 508 aaPredicted RBP25.84■■□□□ 1.73
TOP3A-204ENST00000472959 MED23Q9ULK4 1368 aa25.83■■□□□ 1.73
TOP3A-204ENST00000472959 WTIPA6NIX2 430 aaPredicted RBP25.83■■□□□ 1.73
TOP3A-204ENST00000472959 IL15P40933 162 aaPredicted RBP25.83■■□□□ 1.73
TOP3A-204ENST00000472959 EIF6P56537 245 aaKnown RBP25.83■■□□□ 1.73
TOP3A-204ENST00000472959 ATG9AQ7Z3C6 839 aa25.83■■□□□ 1.73
TOP3A-204ENST00000472959 RPAP2Q8IXW5 612 aaPredicted RBP25.83■■□□□ 1.73
TOP3A-204ENST00000472959 SIL1Q9H173 461 aa25.83■■□□□ 1.73
TOP3A-204ENST00000472959 PA2G4Q9UQ80 394 aaKnown RBP25.83■■□□□ 1.73
TOP3A-204ENST00000472959 SPEF2Q9C093 1822 aa25.82■■□□□ 1.72
TOP3A-204ENST00000472959 GLTPD2A6NH11 291 aa25.82■■□□□ 1.72
TOP3A-204ENST00000472959 UBE4AQ14139 1066 aa25.82■■□□□ 1.72
TOP3A-204ENST00000472959 C15orf52Q6ZUT6 534 aaKnown RBP25.82■■□□□ 1.72
TOP3A-204ENST00000472959 SUPT16HQ9Y5B9 1047 aaKnown RBP25.82■■□□□ 1.72
TOP3A-204ENST00000472959 KDM2BQ8NHM5 1336 aa25.82■■□□□ 1.72
TOP3A-204ENST00000472959 G3V3G9 751 aa25.81■■□□□ 1.72
TOP3A-204ENST00000472959 PDE8BO95263 885 aa25.81■■□□□ 1.72
TOP3A-204ENST00000472959 DCAF8Q5TAQ9 597 aa25.81■■□□□ 1.72
TOP3A-204ENST00000472959 VGLL2Q8N8G2 317 aa25.81■■□□□ 1.72
TOP3A-204ENST00000472959 DICER1Q9UPY3 1922 aaKnown RBP25.8■■□□□ 1.72
TOP3A-204ENST00000472959 COL4A5P29400 1685 aa25.8■■□□□ 1.72
TOP3A-204ENST00000472959 ZNF784Q8NCA9 323 aaPredicted RBP25.8■■□□□ 1.72
TOP3A-204ENST00000472959 CEP126Q9P2H0 1117 aa25.8■■□□□ 1.72
TOP3A-204ENST00000472959 CCDC88AQ3V6T2 1871 aa25.79■■□□□ 1.72
TOP3A-204ENST00000472959 DOK7Q18PE1 504 aa25.79■■□□□ 1.72
TOP3A-204ENST00000472959 DBNDD1Q9H9R9 158 aa25.79■■□□□ 1.72
TOP3A-204ENST00000472959 SNAP23O00161 211 aa25.78■■□□□ 1.72
TOP3A-204ENST00000472959 ECE2O60344 883 aa25.78■■□□□ 1.72
TOP3A-204ENST00000472959 G3BP1Q13283 466 aaKnown RBP eCLIP25.78■■□□□ 1.72
TOP3A-204ENST00000472959 PODNQ7Z5L7 613 aa25.78■■□□□ 1.72
TOP3A-204ENST00000472959 COA1Q9GZY4 146 aa25.78■■□□□ 1.72
TOP3A-204ENST00000472959 ZNF541Q9H0D2 1346 aa25.78■■□□□ 1.72
TOP3A-204ENST00000472959 HMMRO75330 724 aa25.77■■□□□ 1.72
TOP3A-204ENST00000472959 PUM3Q15397 648 aaKnown RBP25.77■■□□□ 1.72
TOP3A-204ENST00000472959 GPC2Q8N158 579 aa25.77■■□□□ 1.72
TOP3A-204ENST00000472959 CRBNQ96SW2 442 aa25.77■■□□□ 1.72
TOP3A-204ENST00000472959 GPBP1L1Q9HC44 474 aaPredicted RBP25.77■■□□□ 1.72
TOP3A-204ENST00000472959 NOP58Q9Y2X3 529 aaKnown RBP25.77■■□□□ 1.72
TOP3A-204ENST00000472959 IRS2Q9Y4H2 1338 aa25.77■■□□□ 1.72
TOP3A-204ENST00000472959 TIAM2Q8IVF5 1701 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms