RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 DBNDD1Q9H9R9 158 aa19.61■□□□□ 0.73
VTI1A-203ENST00000472892 CNOT7Q9UIV1 285 aaKnown RBP19.61■□□□□ 0.73
VTI1A-203ENST00000472892 NEURL1BA8MQ27 555 aa19.6■□□□□ 0.73
VTI1A-203ENST00000472892 HIRAP54198 1017 aaPredicted RBP19.6■□□□□ 0.73
VTI1A-203ENST00000472892 FMR1Q06787 632 aaKnown RBP eCLIP19.6■□□□□ 0.73
VTI1A-203ENST00000472892 CWF19L2Q2TBE0 894 aaKnown RBP19.6■□□□□ 0.73
VTI1A-203ENST00000472892 DEFB115Q30KQ5 88 aa19.6■□□□□ 0.73
VTI1A-203ENST00000472892 ZC3H15Q8WU90 426 aaKnown RBP19.6■□□□□ 0.73
VTI1A-203ENST00000472892 CCDC85AQ96PX6 553 aaPredicted RBP19.6■□□□□ 0.73
VTI1A-203ENST00000472892 H7C1W4 665 aa19.59■□□□□ 0.73
VTI1A-203ENST00000472892 PSMD14O00487 310 aa19.59■□□□□ 0.73
VTI1A-203ENST00000472892 CTSWP56202 376 aa19.59■□□□□ 0.73
VTI1A-203ENST00000472892 FLIIQ13045 1269 aa19.59■□□□□ 0.73
VTI1A-203ENST00000472892 DOK7Q18PE1 504 aa19.59■□□□□ 0.73
VTI1A-203ENST00000472892 CST9Q5W186 159 aa19.59■□□□□ 0.73
VTI1A-203ENST00000472892 ANKRD18AQ8IVF6 992 aa19.59■□□□□ 0.73
VTI1A-203ENST00000472892 TTLL11Q8NHH1 800 aa19.59■□□□□ 0.73
VTI1A-203ENST00000472892 ZC3H12CQ9C0D7 883 aaKnown RBP19.59■□□□□ 0.73
VTI1A-203ENST00000472892 KCNQ5Q9NR82 932 aa19.59■□□□□ 0.73
VTI1A-203ENST00000472892 ANKIB1Q9P2G1 1089 aa19.59■□□□□ 0.73
VTI1A-203ENST00000472892 ZBTB12Q9Y330 459 aaPredicted RBP19.59■□□□□ 0.73
VTI1A-203ENST00000472892 H7C1D1 291 aa19.58■□□□□ 0.72
VTI1A-203ENST00000472892 TRAF5O00463 557 aa19.58■□□□□ 0.72
VTI1A-203ENST00000472892 ECE2O60344 883 aa19.58■□□□□ 0.72
VTI1A-203ENST00000472892 EXOSC9Q06265 439 aaKnown RBP19.58■□□□□ 0.72
VTI1A-203ENST00000472892 GPR101Q96P66 508 aaPredicted RBP19.58■□□□□ 0.72
VTI1A-203ENST00000472892 GGA1Q9UJY5 639 aa19.58■□□□□ 0.72
VTI1A-203ENST00000472892 SHTN1A0MZ66 631 aa19.57■□□□□ 0.72
VTI1A-203ENST00000472892 UFL1O94874 794 aa19.57■□□□□ 0.72
VTI1A-203ENST00000472892 GCKRQ14397 625 aa19.57■□□□□ 0.72
VTI1A-203ENST00000472892 MICALL2Q8IY33 904 aa19.57■□□□□ 0.72
VTI1A-203ENST00000472892 CDC5LQ99459 802 aaKnown RBP19.57■□□□□ 0.72
VTI1A-203ENST00000472892 SPINK5Q9NQ38 1064 aaPredicted RBP19.57■□□□□ 0.72
VTI1A-203ENST00000472892 ABT1Q9ULW3 272 aaKnown RBP19.57■□□□□ 0.72
VTI1A-203ENST00000472892 RTL9Q8NET4 1388 aa19.57■□□□□ 0.72
VTI1A-203ENST00000472892 RPS12P25398 132 aaKnown RBP19.56■□□□□ 0.72
VTI1A-203ENST00000472892 FAM9BQ8IZU0 186 aa19.56■□□□□ 0.72
VTI1A-203ENST00000472892 TRPM4Q8TD43 1214 aa19.56■□□□□ 0.72
VTI1A-203ENST00000472892 DNAAF4Q8WXU2 420 aa19.56■□□□□ 0.72
VTI1A-203ENST00000472892 XDHP47989 1333 aa19.55■□□□□ 0.72
VTI1A-203ENST00000472892 VIL1P09327 827 aaKnown RBP19.55■□□□□ 0.72
VTI1A-203ENST00000472892 FKBP5Q13451 457 aaPredicted RBP19.55■□□□□ 0.72
VTI1A-203ENST00000472892 UBE3BQ7Z3V4 1068 aa19.55■□□□□ 0.72
VTI1A-203ENST00000472892 LINS1Q8NG48 757 aa19.55■□□□□ 0.72
VTI1A-203ENST00000472892 PLA2G12BQ9BX93 195 aa19.55■□□□□ 0.72
VTI1A-203ENST00000472892 GLIS2Q9BZE0 524 aaPredicted RBP19.55■□□□□ 0.72
VTI1A-203ENST00000472892 GREM2Q9H772 168 aa19.55■□□□□ 0.72
VTI1A-203ENST00000472892 BSDC1Q9NW68 430 aaPredicted RBP19.55■□□□□ 0.72
VTI1A-203ENST00000472892 WDR33Q9C0J8 1336 aaKnown RBP19.54■□□□□ 0.72
VTI1A-203ENST00000472892 ATP2B4P23634 1241 aa19.54■□□□□ 0.72
VTI1A-203ENST00000472892 CASP7P55210 303 aa19.54■□□□□ 0.72
VTI1A-203ENST00000472892 CDC37L1Q7L3B6 337 aa19.54■□□□□ 0.72
VTI1A-203ENST00000472892 SAMD7Q7Z3H4 446 aa19.54■□□□□ 0.72
VTI1A-203ENST00000472892 G3V3G9 751 aa19.53■□□□□ 0.72
VTI1A-203ENST00000472892 DCAF8Q5TAQ9 597 aa19.53■□□□□ 0.72
VTI1A-203ENST00000472892 MYH16Q9H6N6 1097 aa19.53■□□□□ 0.72
VTI1A-203ENST00000472892 WBP1LQ9NX94 342 aa19.53■□□□□ 0.72
VTI1A-203ENST00000472892 MINPP1Q9UNW1 487 aa19.53■□□□□ 0.72
VTI1A-203ENST00000472892 TLL2Q9Y6L7 1015 aa19.53■□□□□ 0.72
VTI1A-203ENST00000472892 FOXN1O15353 648 aa19.52■□□□□ 0.72
VTI1A-203ENST00000472892 WTIPA6NIX2 430 aaPredicted RBP19.51■□□□□ 0.71
VTI1A-203ENST00000472892 CELF2O95319 508 aaKnown RBP19.51■□□□□ 0.71
VTI1A-203ENST00000472892 EGFRP00533 1210 aa19.51■□□□□ 0.71
VTI1A-203ENST00000472892 CSF1RP07333 972 aa19.51■□□□□ 0.71
VTI1A-203ENST00000472892 TNS4Q8IZW8 715 aa19.51■□□□□ 0.71
VTI1A-203ENST00000472892 ECE1P42892 770 aa19.5■□□□□ 0.71
VTI1A-203ENST00000472892 TBC1D10BQ4KMP7 808 aaPredicted RBP19.5■□□□□ 0.71
VTI1A-203ENST00000472892 PODNQ7Z5L7 613 aa19.5■□□□□ 0.71
VTI1A-203ENST00000472892 SAPCD2Q86UD0 394 aa19.5■□□□□ 0.71
VTI1A-203ENST00000472892 AIDAQ96BJ3 306 aa19.5■□□□□ 0.71
VTI1A-203ENST00000472892 CAPNS2Q96L46 248 aa19.5■□□□□ 0.71
VTI1A-203ENST00000472892 CACNA1FO60840 1977 aa19.5■□□□□ 0.71
VTI1A-203ENST00000472892 MAP2K1Q02750 393 aaPredicted RBP19.49■□□□□ 0.71
VTI1A-203ENST00000472892 BEND3Q5T5X7 828 aa19.49■□□□□ 0.71
VTI1A-203ENST00000472892 USP48Q86UV5 1035 aa19.49■□□□□ 0.71
VTI1A-203ENST00000472892 AGBL3Q8NEM8 1001 aa19.49■□□□□ 0.71
VTI1A-203ENST00000472892 TRPM7Q96QT4 1865 aa19.49■□□□□ 0.71
VTI1A-203ENST00000472892 SCN9AQ15858 1988 aa19.48■□□□□ 0.71
VTI1A-203ENST00000472892 F6X3S4 739 aa19.48■□□□□ 0.71
VTI1A-203ENST00000472892 ITGA6P23229 1130 aa19.48■□□□□ 0.71
VTI1A-203ENST00000472892 IGHMBP2P38935 993 aaKnown RBP19.48■□□□□ 0.71
VTI1A-203ENST00000472892 CTCFP49711 727 aaPredicted RBP19.48■□□□□ 0.71
VTI1A-203ENST00000472892 CCT4P50991 539 aaKnown RBP19.48■□□□□ 0.71
VTI1A-203ENST00000472892 ZNF280AP59817 542 aaPredicted RBP19.48■□□□□ 0.71
VTI1A-203ENST00000472892 RBM26Q5T8P6 1007 aaKnown RBP19.48■□□□□ 0.71
VTI1A-203ENST00000472892 RSBN1LQ6PCB5 846 aaPredicted RBP19.48■□□□□ 0.71
VTI1A-203ENST00000472892 HHIPL1Q96JK4 782 aa19.48■□□□□ 0.71
VTI1A-203ENST00000472892 PRDM10Q9NQV6 1147 aa19.48■□□□□ 0.71
VTI1A-203ENST00000472892 ZNF609O15014 1411 aa19.48■□□□□ 0.71
VTI1A-203ENST00000472892 ZNF521Q96K83 1311 aa19.48■□□□□ 0.71
VTI1A-203ENST00000472892 MED23Q9ULK4 1368 aa19.47■□□□□ 0.71
VTI1A-203ENST00000472892 FAM161AQ3B820 660 aa19.47■□□□□ 0.71
VTI1A-203ENST00000472892 CYP4F22Q6NT55 531 aa19.47■□□□□ 0.71
VTI1A-203ENST00000472892 GMLQ99445 158 aa19.47■□□□□ 0.71
VTI1A-203ENST00000472892 LEMD3Q9Y2U8 911 aa19.47■□□□□ 0.71
VTI1A-203ENST00000472892 MYH3P11055 1940 aa19.47■□□□□ 0.71
VTI1A-203ENST00000472892 USP17L3A6NCW0 530 aa19.46■□□□□ 0.71
VTI1A-203ENST00000472892 USP17L4A6NCW7 530 aa19.46■□□□□ 0.71
VTI1A-203ENST00000472892 KIF4BQ2VIQ3 1234 aa19.46■□□□□ 0.71
VTI1A-203ENST00000472892 PAXIP1Q6ZW49 1069 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms