RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 GORABQ5T7V8 394 aa17.75■□□□□ 0.43
HIF3A-206ENST00000472815 EPB41L2O43491 1005 aaKnown RBP17.75■□□□□ 0.43
HIF3A-206ENST00000472815 SMIM5Q71RC9 77 aa17.75■□□□□ 0.43
HIF3A-206ENST00000472815 TICAM2Q86XR7 235 aa17.75■□□□□ 0.43
HIF3A-206ENST00000472815 DBNDD2Q9BQY9 259 aa17.75■□□□□ 0.43
HIF3A-206ENST00000472815 DIAPH3Q9NSV4 1193 aa17.75■□□□□ 0.43
HIF3A-206ENST00000472815 TFCP2L1Q9NZI6 479 aa17.75■□□□□ 0.43
HIF3A-206ENST00000472815 ABCC12Q96J65 1359 aa17.74■□□□□ 0.43
HIF3A-206ENST00000472815 MAP4K4O95819 1239 aaPredicted RBP17.74■□□□□ 0.43
HIF3A-206ENST00000472815 BECN1Q14457 450 aa17.74■□□□□ 0.43
HIF3A-206ENST00000472815 AMIGO3Q86WK7 504 aa17.74■□□□□ 0.43
HIF3A-206ENST00000472815 ESYT1Q9BSJ8 1104 aa17.74■□□□□ 0.43
HIF3A-206ENST00000472815 BOLA2Q9H3K6 86 aa17.74■□□□□ 0.43
HIF3A-206ENST00000472815 SPEF2Q9C093 1822 aa17.73■□□□□ 0.43
HIF3A-206ENST00000472815 ATP2B3Q16720 1220 aa17.73■□□□□ 0.43
HIF3A-206ENST00000472815 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.73■□□□□ 0.43
HIF3A-206ENST00000472815 AKT1S1Q96B36 256 aa17.73■□□□□ 0.43
HIF3A-206ENST00000472815 STK32BQ9NY57 414 aa17.73■□□□□ 0.43
HIF3A-206ENST00000472815 RIC1Q4ADV7 1423 aa17.73■□□□□ 0.43
HIF3A-206ENST00000472815 SOCS7O14512 581 aa17.72■□□□□ 0.43
HIF3A-206ENST00000472815 PDE8BO95263 885 aa17.72■□□□□ 0.43
HIF3A-206ENST00000472815 MCCP23508 829 aa17.72■□□□□ 0.43
HIF3A-206ENST00000472815 TIMM10P62072 90 aa17.72■□□□□ 0.43
HIF3A-206ENST00000472815 ANKRD18AQ8IVF6 992 aa17.72■□□□□ 0.43
HIF3A-206ENST00000472815 CNBD1Q8NA66 436 aa17.72■□□□□ 0.43
HIF3A-206ENST00000472815 RFX7Q2KHR2 1363 aa17.72■□□□□ 0.43
HIF3A-206ENST00000472815 GYS1P13807 737 aa17.72■□□□□ 0.43
HIF3A-206ENST00000472815 NFIXQ14938 502 aa17.72■□□□□ 0.43
HIF3A-206ENST00000472815 PUM3Q15397 648 aaKnown RBP17.72■□□□□ 0.43
HIF3A-206ENST00000472815 HAUS7Q99871 368 aa17.72■□□□□ 0.43
HIF3A-206ENST00000472815 FSD1Q9BTV5 496 aa17.72■□□□□ 0.43
HIF3A-206ENST00000472815 ST5P78524 1137 aa17.71■□□□□ 0.43
HIF3A-206ENST00000472815 SLC15A2Q16348 729 aa17.71■□□□□ 0.43
HIF3A-206ENST00000472815 ZNF827Q17R98 1081 aa17.71■□□□□ 0.43
HIF3A-206ENST00000472815 TTC39AQ5SRH9 613 aa17.71■□□□□ 0.43
HIF3A-206ENST00000472815 IFIT1P09914 478 aaKnown RBP17.7■□□□□ 0.42
HIF3A-206ENST00000472815 LRRFIP1Q32MZ4 808 aaKnown RBP17.7■□□□□ 0.42
HIF3A-206ENST00000472815 KIAA1211Q6ZU35 1233 aa17.7■□□□□ 0.42
HIF3A-206ENST00000472815 LPIN2Q92539 896 aa17.7■□□□□ 0.42
HIF3A-206ENST00000472815 XAGE2Q96GT9 111 aa17.7■□□□□ 0.42
HIF3A-206ENST00000472815 USP26Q9BXU7 913 aa17.7■□□□□ 0.42
HIF3A-206ENST00000472815 SEC31BQ9NQW1 1179 aa17.7■□□□□ 0.42
HIF3A-206ENST00000472815 RAD50Q92878 1312 aa17.7■□□□□ 0.42
HIF3A-206ENST00000472815 ARAP2Q8WZ64 1704 aa17.7■□□□□ 0.42
HIF3A-206ENST00000472815 SLC5A1P13866 664 aa17.69■□□□□ 0.42
HIF3A-206ENST00000472815 VGLL2Q8N8G2 317 aa17.69■□□□□ 0.42
HIF3A-206ENST00000472815 ANO8Q9HCE9 1232 aaPredicted RBP17.69■□□□□ 0.42
HIF3A-206ENST00000472815 DDX46Q7L014 1031 aaKnown RBP17.69■□□□□ 0.42
HIF3A-206ENST00000472815 NLGN1Q8N2Q7 840 aa17.69■□□□□ 0.42
HIF3A-206ENST00000472815 DNAJC2Q99543 621 aaKnown RBP17.69■□□□□ 0.42
HIF3A-206ENST00000472815 ANO2Q9NQ90 1003 aa17.69■□□□□ 0.42
HIF3A-206ENST00000472815 BSDC1Q9NW68 430 aaPredicted RBP17.69■□□□□ 0.42
HIF3A-206ENST00000472815 SGSM2O43147 1006 aa17.67■□□□□ 0.42
HIF3A-206ENST00000472815 MSH5O43196 834 aa17.67■□□□□ 0.42
HIF3A-206ENST00000472815 CWC27Q6UX04 472 aaKnown RBP17.67■□□□□ 0.42
HIF3A-206ENST00000472815 ZNF512BQ96KM6 892 aaPredicted RBP17.67■□□□□ 0.42
HIF3A-206ENST00000472815 PAG1Q9NWQ8 432 aa17.67■□□□□ 0.42
HIF3A-206ENST00000472815 SERPINB2P05120 415 aa17.67■□□□□ 0.42
HIF3A-206ENST00000472815 UQCRFS1P1P0C7P4 283 aa17.67■□□□□ 0.42
HIF3A-206ENST00000472815 TM4SF1P30408 202 aa17.67■□□□□ 0.42
HIF3A-206ENST00000472815 ERICH6Q7L0X2 663 aa17.67■□□□□ 0.42
HIF3A-206ENST00000472815 KBTBD3Q8NAB2 608 aa17.66■□□□□ 0.42
HIF3A-206ENST00000472815 IL27Q8NEV9 243 aa17.66■□□□□ 0.42
HIF3A-206ENST00000472815 RPS8P62241 208 aaKnown RBP17.65■□□□□ 0.42
HIF3A-206ENST00000472815 CHRNDQ07001 517 aa17.65■□□□□ 0.42
HIF3A-206ENST00000472815 PRR5LQ6MZQ0 368 aa17.65■□□□□ 0.42
HIF3A-206ENST00000472815 PNPLA7Q6ZV29 1317 aa17.65■□□□□ 0.42
HIF3A-206ENST00000472815 FGFR2P21802 821 aa17.64■□□□□ 0.41
HIF3A-206ENST00000472815 ANKRD2Q9GZV1 360 aa17.64■□□□□ 0.41
HIF3A-206ENST00000472815 GOLIM4O00461 696 aa17.64■□□□□ 0.41
HIF3A-206ENST00000472815 ADORA1P30542 326 aa17.64■□□□□ 0.41
HIF3A-206ENST00000472815 ANAPC15P60006 121 aa17.64■□□□□ 0.41
HIF3A-206ENST00000472815 RABEP1Q15276 862 aa17.64■□□□□ 0.41
HIF3A-206ENST00000472815 TTF1Q15361 905 aaPredicted RBP17.64■□□□□ 0.41
HIF3A-206ENST00000472815 C3orf67Q6ZVT6 689 aa17.64■□□□□ 0.41
HIF3A-206ENST00000472815 RPGRQ92834 1020 aaKnown RBP17.64■□□□□ 0.41
HIF3A-206ENST00000472815 TNRC6CQ9HCJ0 1690 aaKnown RBP17.63■□□□□ 0.41
HIF3A-206ENST00000472815 A0A1B0GUL6 1792 aa17.63■□□□□ 0.41
HIF3A-206ENST00000472815 FKBP4Q02790 459 aaKnown RBP eCLIP17.63■□□□□ 0.41
HIF3A-206ENST00000472815 UBE4AQ14139 1066 aa17.63■□□□□ 0.41
HIF3A-206ENST00000472815 COL23A1Q86Y22 540 aaPredicted RBP17.63■□□□□ 0.41
HIF3A-206ENST00000472815 HSCBQ8IWL3 235 aa17.63■□□□□ 0.41
HIF3A-206ENST00000472815 POLRMTO00411 1230 aaKnown RBP17.62■□□□□ 0.41
HIF3A-206ENST00000472815 HELBQ8NG08 1087 aaPredicted RBP17.62■□□□□ 0.41
HIF3A-206ENST00000472815 TAF5LO75529 589 aa17.61■□□□□ 0.41
HIF3A-206ENST00000472815 ZFYP08048 801 aaPredicted RBP17.61■□□□□ 0.41
HIF3A-206ENST00000472815 ARID4AP29374 1257 aaPredicted RBP17.61■□□□□ 0.41
HIF3A-206ENST00000472815 NMIQ13287 307 aaPredicted RBP17.61■□□□□ 0.41
HIF3A-206ENST00000472815 CCDC102BQ68D86 513 aa17.61■□□□□ 0.41
HIF3A-206ENST00000472815 CELF1Q92879 486 aaKnown RBP17.61■□□□□ 0.41
HIF3A-206ENST00000472815 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.61■□□□□ 0.41
HIF3A-206ENST00000472815 TAF1P21675 1872 aa17.61■□□□□ 0.41
HIF3A-206ENST00000472815 GRAPQ13588 217 aa17.61■□□□□ 0.41
HIF3A-206ENST00000472815 ZSCAN25Q6NSZ9 544 aa17.61■□□□□ 0.41
HIF3A-206ENST00000472815 GRAPLQ8TC17 118 aaPredicted RBP17.61■□□□□ 0.41
HIF3A-206ENST00000472815 SNX21Q969T3 373 aa17.61■□□□□ 0.41
HIF3A-206ENST00000472815 RBM17Q96I25 401 aaKnown RBP17.61■□□□□ 0.41
HIF3A-206ENST00000472815 SNRKQ9NRH2 765 aa17.61■□□□□ 0.41
HIF3A-206ENST00000472815 GNL3LQ9NVN8 582 aaKnown RBP17.61■□□□□ 0.41
HIF3A-206ENST00000472815 MINPP1Q9UNW1 487 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms