RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 LOC102724428A0A0B4J2F2 783 aa10.03□□□□□ -0.8
CLK1-209ENST00000472679 PHF20L1A8MW92 1017 aa10.03□□□□□ -0.8
CLK1-209ENST00000472679 EIF1AYO14602 144 aaKnown RBP10.03□□□□□ -0.8
CLK1-209ENST00000472679 SIK1P57059 783 aa10.03□□□□□ -0.8
CLK1-209ENST00000472679 FMR1Q06787 632 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLK1-209ENST00000472679 CSRNP1Q96S65 589 aa10.03□□□□□ -0.8
CLK1-209ENST00000472679 STARD13Q9Y3M8 1113 aa10.03□□□□□ -0.8
CLK1-209ENST00000472679 P4HBP07237 508 aaKnown RBP10.02□□□□□ -0.81
CLK1-209ENST00000472679 CPB1P15086 417 aa10.02□□□□□ -0.81
CLK1-209ENST00000472679 HYAL2Q12891 473 aa10.02□□□□□ -0.81
CLK1-209ENST00000472679 FAM35AQ86V20 835 aa10.02□□□□□ -0.81
CLK1-209ENST00000472679 SVOPQ8N4V2 548 aa10.02□□□□□ -0.81
CLK1-209ENST00000472679 BTBD6Q96KE9 485 aa10.02□□□□□ -0.81
CLK1-209ENST00000472679 SETDB2Q96T68 719 aa10.02□□□□□ -0.81
CLK1-209ENST00000472679 SALL4Q9UJQ4 1053 aa10.02□□□□□ -0.81
CLK1-209ENST00000472679 ARHGEF15O94989 841 aa10.01□□□□□ -0.81
CLK1-209ENST00000472679 KIF4AO95239 1232 aa10.01□□□□□ -0.81
CLK1-209ENST00000472679 ACPPP15309 386 aa10.01□□□□□ -0.81
CLK1-209ENST00000472679 MAPK8P45983 427 aa10.01□□□□□ -0.81
CLK1-209ENST00000472679 ZSCAN1Q8NBB4 408 aa10.01□□□□□ -0.81
CLK1-209ENST00000472679 LRRC4BQ9NT99 713 aa10.01□□□□□ -0.81
CLK1-209ENST00000472679 CPNE3O75131 537 aaKnown RBP10□□□□□ -0.81
CLK1-209ENST00000472679 NEFLP07196 543 aa10□□□□□ -0.81
CLK1-209ENST00000472679 ALAS2P22557 587 aa10□□□□□ -0.81
CLK1-209ENST00000472679 PERM1Q5SV97 790 aa10□□□□□ -0.81
CLK1-209ENST00000472679 CHSY3Q70JA7 882 aa10□□□□□ -0.81
CLK1-209ENST00000472679 NCAPG2Q86XI2 1143 aa10□□□□□ -0.81
CLK1-209ENST00000472679 PMEPA1Q969W9 287 aa10□□□□□ -0.81
CLK1-209ENST00000472679 LATS2Q9NRM7 1088 aa10□□□□□ -0.81
CLK1-209ENST00000472679 WWC3Q9ULE0 1092 aa10□□□□□ -0.81
CLK1-209ENST00000472679 AMOTL2Q9Y2J4 779 aa10□□□□□ -0.81
CLK1-209ENST00000472679 PNMA6FA0A0J9YX94 578 aa9.99□□□□□ -0.81
CLK1-209ENST00000472679 MAP3K10Q02779 954 aa9.99□□□□□ -0.81
CLK1-209ENST00000472679 ENOX2Q16206 610 aaKnown RBP9.99□□□□□ -0.81
CLK1-209ENST00000472679 PCSK7Q16549 785 aa9.99□□□□□ -0.81
CLK1-209ENST00000472679 CEP120Q8N960 986 aa9.99□□□□□ -0.81
CLK1-209ENST00000472679 DNAJC25Q9H1X3 360 aa9.99□□□□□ -0.81
CLK1-209ENST00000472679 ALBP02768 609 aa9.98□□□□□ -0.81
CLK1-209ENST00000472679 HOXB4P17483 251 aaPredicted RBP9.98□□□□□ -0.81
CLK1-209ENST00000472679 EIF2AK2P19525 551 aaKnown RBP9.98□□□□□ -0.81
CLK1-209ENST00000472679 ATP11AP98196 1134 aa9.98□□□□□ -0.81
CLK1-209ENST00000472679 PSAPL1Q6NUJ1 521 aa9.98□□□□□ -0.81
CLK1-209ENST00000472679 C20orf204Q6ZNR8 217 aa9.98□□□□□ -0.81
CLK1-209ENST00000472679 C8orf86Q6ZUL3 223 aa9.98□□□□□ -0.81
CLK1-209ENST00000472679 NUDT8Q8WV74 236 aa9.98□□□□□ -0.81
CLK1-209ENST00000472679 LPIN3Q9BQK8 851 aa9.98□□□□□ -0.81
CLK1-209ENST00000472679 TRPA1O75762 1119 aa9.97□□□□□ -0.81
CLK1-209ENST00000472679 AMPD1P23109 780 aa9.97□□□□□ -0.81
CLK1-209ENST00000472679 IRS1P35568 1242 aa9.97□□□□□ -0.81
CLK1-209ENST00000472679 TAGLNQ01995 201 aaKnown RBP9.97□□□□□ -0.81
CLK1-209ENST00000472679 PEAR1Q5VY43 1037 aaPredicted RBP9.97□□□□□ -0.81
CLK1-209ENST00000472679 GALNT12Q8IXK2 581 aa9.97□□□□□ -0.81
CLK1-209ENST00000472679 CCDC74AQ96AQ1 378 aa9.97□□□□□ -0.81
CLK1-209ENST00000472679 GHRHP01286 108 aa9.96□□□□□ -0.82
CLK1-209ENST00000472679 ERCC3P19447 782 aa9.96□□□□□ -0.82
CLK1-209ENST00000472679 INSM1Q01101 510 aaPredicted RBP9.96□□□□□ -0.82
CLK1-209ENST00000472679 ELMSAN1Q6PJG2 1045 aa9.96□□□□□ -0.82
CLK1-209ENST00000472679 FBXO33Q7Z6M2 555 aa9.96□□□□□ -0.82
CLK1-209ENST00000472679 MICALL1Q8N3F8 863 aa9.96□□□□□ -0.82
CLK1-209ENST00000472679 NEDD1Q8NHV4 660 aa9.96□□□□□ -0.82
CLK1-209ENST00000472679 EPS8L3Q8TE67 593 aaKnown RBP9.96□□□□□ -0.82
CLK1-209ENST00000472679 SMG9Q9H0W8 520 aaKnown RBP9.96□□□□□ -0.82
CLK1-209ENST00000472679 RASSF4Q9H2L5 321 aa9.96□□□□□ -0.82
CLK1-209ENST00000472679 M0R082 166 aa9.95□□□□□ -0.82
CLK1-209ENST00000472679 COL19A1Q14993 1142 aa9.95□□□□□ -0.82
CLK1-209ENST00000472679 PI16Q6UXB8 463 aa9.95□□□□□ -0.82
CLK1-209ENST00000472679 ZNF417Q8TAU3 575 aa9.95□□□□□ -0.82
CLK1-209ENST00000472679 PLD4Q96BZ4 506 aa9.95□□□□□ -0.82
CLK1-209ENST00000472679 SPACA7Q96KW9 195 aa9.95□□□□□ -0.82
CLK1-209ENST00000472679 HHIPQ96QV1 700 aa9.95□□□□□ -0.82
CLK1-209ENST00000472679 ZNF587Q96SQ5 575 aaPredicted RBP9.95□□□□□ -0.82
CLK1-209ENST00000472679 NPHS2Q9NP85 383 aa9.95□□□□□ -0.82
CLK1-209ENST00000472679 CCDC9Q9Y3X0 531 aaKnown RBP9.95□□□□□ -0.82
CLK1-209ENST00000472679 NFKBIEO00221 500 aa9.94□□□□□ -0.82
CLK1-209ENST00000472679 EDN3P14138 238 aa9.94□□□□□ -0.82
CLK1-209ENST00000472679 EAPPQ56P03 285 aaPredicted RBP9.94□□□□□ -0.82
CLK1-209ENST00000472679 ADAMTSL4Q6UY14 1074 aa9.94□□□□□ -0.82
CLK1-209ENST00000472679 RGS22Q8NE09 1264 aa9.94□□□□□ -0.82
CLK1-209ENST00000472679 OSMRQ99650 979 aa9.94□□□□□ -0.82
CLK1-209ENST00000472679 ZKSCAN3Q9BRR0 538 aa9.94□□□□□ -0.82
CLK1-209ENST00000472679 RNF19AQ9NV58 838 aa9.94□□□□□ -0.82
CLK1-209ENST00000472679 DZANK1Q9NVP4 752 aa9.94□□□□□ -0.82
CLK1-209ENST00000472679 A0A1W2PP55 124 aa9.93□□□□□ -0.82
CLK1-209ENST00000472679 RGS9O75916 674 aaPredicted RBP9.93□□□□□ -0.82
CLK1-209ENST00000472679 LDHBP07195 334 aaKnown RBP9.93□□□□□ -0.82
CLK1-209ENST00000472679 SNRPNP63162 240 aaKnown RBP9.93□□□□□ -0.82
CLK1-209ENST00000472679 KANK3Q6NY19 840 aa9.93□□□□□ -0.82
CLK1-209ENST00000472679 PBX4Q9BYU1 374 aa9.93□□□□□ -0.82
CLK1-209ENST00000472679 RRAGCQ9HB90 399 aa9.93□□□□□ -0.82
CLK1-209ENST00000472679 JPH1Q9HDC5 661 aaPredicted RBP9.93□□□□□ -0.82
CLK1-209ENST00000472679 ENAMQ9NRM1 1142 aa9.93□□□□□ -0.82
CLK1-209ENST00000472679 FRRS1LQ9P0K9 344 aa9.93□□□□□ -0.82
CLK1-209ENST00000472679 DGKGP49619 791 aa9.92□□□□□ -0.82
CLK1-209ENST00000472679 GRIK5Q16478 980 aa9.92□□□□□ -0.82
CLK1-209ENST00000472679 RBSNQ9H1K0 784 aa9.92□□□□□ -0.82
CLK1-209ENST00000472679 TRIM33Q9UPN9 1127 aa9.92□□□□□ -0.82
CLK1-209ENST00000472679 AFF1P51825 1210 aaKnown RBP9.91□□□□□ -0.82
CLK1-209ENST00000472679 COL9A3Q14050 684 aaPredicted RBP9.91□□□□□ -0.82
CLK1-209ENST00000472679 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.91□□□□□ -0.82
CLK1-209ENST00000472679 CEP135Q66GS9 1140 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms