RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 TTLL11Q8NHH1 800 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 TTC14Q96N46 770 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 THRAP3Q9Y2W1 955 aaKnown RBP5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 NUP188Q5SRE5 1749 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 ANKRD18BA2A2Z9 1011 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 HCLS1P14317 486 aaPredicted RBP5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 IL6STP40189 918 aaPredicted RBP5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 SKOR2Q2VWA4 1001 aaPredicted RBP5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 MCMDC2Q4G0Z9 681 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 BLOC1S2Q6QNY1 142 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 NECAB1Q8N987 351 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 KBTBD3Q8NAB2 608 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 HELBQ8NG08 1087 aaPredicted RBP5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 XAGE2Q96GT9 111 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 INTS4Q96HW7 963 aaKnown RBP5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 ZSWIM6Q9HCJ5 1215 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 SPATA31A5Q5VU36 1347 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 SPATA31A7Q8IWB4 1347 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 CIAO1O76071 339 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 CSF1RP07333 972 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 PSMA5P28066 241 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 STK3Q13188 491 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 CCDC87Q9NVE4 849 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 SMC3Q9UQE7 1217 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 AKAP2Q9Y2D5 859 aa5.82□□□□□ -1.48
TM4SF1-202ENST00000472441 PTMSP20962 102 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 CTSWP56202 376 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 ITPK1Q13572 414 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 WASHC4Q2M389 1173 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 VPS53Q5VIR6 699 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 SUSD4Q5VX71 490 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 INTS5Q6P9B9 1019 aaKnown RBP5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 PI16Q6UXB8 463 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 IL27Q8NEV9 243 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 IL17RAQ96F46 866 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 GPR108Q9NPR9 543 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 RTN4Q9NQC3 1192 aaKnown RBP5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 ZNF609O15014 1411 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 UBN2Q6ZU65 1347 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 PDE8AO60658 829 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 BRD1O95696 1058 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 EIF5P55010 431 aaKnown RBP5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 FGD1P98174 961 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 ATP2B3Q16720 1220 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 L1TD1Q5T7N2 865 aaKnown RBP5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 CAVIN1Q6NZI2 390 aaKnown RBP5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 GDPD2Q9HCC8 539 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 LMBRD1Q9NUN5 540 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 TJP1Q07157 1748 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 ZNF831Q5JPB2 1677 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 ERVV-1B6SEH8 477 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 ZAP70P43403 619 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 SCARF1Q14162 830 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 ME3Q16798 604 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 CLEC17AQ6ZS10 378 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 CCDC24Q8N4L8 307 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 PLA2G12BQ9BX93 195 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 LRRC2Q9BYS8 371 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 TM6SF1Q9BZW5 370 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 TPCN1Q9ULQ1 816 aa5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 NIP7Q9Y221 180 aaKnown RBP eCLIP5.81□□□□□ -1.48
TM4SF1-202ENST00000472441 MED23Q9ULK4 1368 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 SNAP23O00161 211 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 KCNA4P22459 653 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 GJB2P29033 226 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 BICDL1Q6ZP65 573 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 ZNF34Q8IZ26 560 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 KCNB2Q92953 911 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 NEK1Q96PY6 1258 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 RIPOR2Q9Y4F9 1068 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 PALLDQ8WX93 1383 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 CDHR2Q9BYE9 1310 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 RNF113AO15541 343 aaKnown RBP5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 CYP21A2P08686 494 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 XRCC6P12956 609 aaKnown RBP eCLIP5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 HSP90B1P14625 803 aaKnown RBP5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 SYT1P21579 422 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 RPS6KB1P23443 525 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 PTF1AQ7RTS3 328 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 ZSCAN31Q96LW9 406 aaPredicted RBP5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 MPHOSPH8Q99549 860 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 UTP14AQ9BVJ6 771 aaKnown RBP5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 SEC31BQ9NQW1 1179 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 RBM27Q9P2N5 1060 aaKnown RBP5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 NAP1L2Q9ULW6 460 aaPredicted RBP5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 U3KPZ7 1027 aaPredicted RBP5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 ATRNO75882 1429 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 DOT1LQ8TEK3 1739 aa5.8□□□□□ -1.48
TM4SF1-202ENST00000472441 SH3TC1Q8TE82 1336 aa5.79□□□□□ -1.48
TM4SF1-202ENST00000472441 WDR33Q9C0J8 1336 aaKnown RBP5.79□□□□□ -1.48
TM4SF1-202ENST00000472441 A0A0G2JLW4 131 aa5.79□□□□□ -1.48
TM4SF1-202ENST00000472441 VPS37CA5D8V6 355 aaPredicted RBP5.79□□□□□ -1.48
TM4SF1-202ENST00000472441 STX6O43752 255 aa5.79□□□□□ -1.48
TM4SF1-202ENST00000472441 KLHL40Q2TBA0 621 aa5.79□□□□□ -1.48
TM4SF1-202ENST00000472441 BARGINQ6ZT62 677 aa5.79□□□□□ -1.48
TM4SF1-202ENST00000472441 GAS2L3Q86XJ1 694 aa5.79□□□□□ -1.48
TM4SF1-202ENST00000472441 OSBP2Q969R2 916 aa5.79□□□□□ -1.48
TM4SF1-202ENST00000472441 PANK2Q9BZ23 570 aa5.79□□□□□ -1.48
TM4SF1-202ENST00000472441 HELLSQ9NRZ9 838 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 251.3 ms