RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 LRRC9Q6ZRR7 1453 aa10.78□□□□□ -0.68
SCAF4-205ENST00000472318 DHX29Q7Z478 1369 aaKnown RBP10.77□□□□□ -0.68
SCAF4-205ENST00000472318 COL16A1Q07092 1604 aaPredicted RBP10.77□□□□□ -0.68
SCAF4-205ENST00000472318 KIAA1107Q9UPP5 1409 aa10.77□□□□□ -0.68
SCAF4-205ENST00000472318 EP400Q96L91 3159 aa10.77□□□□□ -0.69
SCAF4-205ENST00000472318 TSEN2Q8NCE0 465 aaKnown RBP10.77□□□□□ -0.69
SCAF4-205ENST00000472318 MKL2Q9ULH7 1088 aa10.77□□□□□ -0.69
SCAF4-205ENST00000472318 PHLPP1O60346 1717 aa10.77□□□□□ -0.69
SCAF4-205ENST00000472318 GPATCH8Q9UKJ3 1502 aaKnown RBP10.77□□□□□ -0.69
SCAF4-205ENST00000472318 AFF2P51816 1311 aa10.77□□□□□ -0.69
SCAF4-205ENST00000472318 FGD6Q6ZV73 1430 aa10.76□□□□□ -0.69
SCAF4-205ENST00000472318 NEURL1BA8MQ27 555 aa10.76□□□□□ -0.69
SCAF4-205ENST00000472318 IGHA1P01876 353 aa10.76□□□□□ -0.69
SCAF4-205ENST00000472318 ADH6P28332 368 aa10.76□□□□□ -0.69
SCAF4-205ENST00000472318 STRN4Q9NRL3 753 aa10.76□□□□□ -0.69
SCAF4-205ENST00000472318 NCOA2Q15596 1464 aa10.75□□□□□ -0.69
SCAF4-205ENST00000472318 SFI1A8K8P3 1242 aa10.75□□□□□ -0.69
SCAF4-205ENST00000472318 KCNA6P17658 529 aa10.75□□□□□ -0.69
SCAF4-205ENST00000472318 RBM6P78332 1123 aaKnown RBP10.75□□□□□ -0.69
SCAF4-205ENST00000472318 ZNF468Q5VIY5 522 aaPredicted RBP10.75□□□□□ -0.69
SCAF4-205ENST00000472318 C1orf53Q5VUE5 145 aa10.75□□□□□ -0.69
SCAF4-205ENST00000472318 GPAT2Q6NUI2 795 aa10.75□□□□□ -0.69
SCAF4-205ENST00000472318 CALR3Q96L12 384 aaKnown RBP10.75□□□□□ -0.69
SCAF4-205ENST00000472318 PPP1R12CQ9BZL4 782 aa10.75□□□□□ -0.69
SCAF4-205ENST00000472318 KLF15Q9UIH9 416 aa10.75□□□□□ -0.69
SCAF4-205ENST00000472318 CDC42BPAQ5VT25 1732 aa10.75□□□□□ -0.69
SCAF4-205ENST00000472318 C21orf2O43822 256 aa10.74□□□□□ -0.69
SCAF4-205ENST00000472318 RASA1P20936 1047 aa10.74□□□□□ -0.69
SCAF4-205ENST00000472318 LRRC69Q6ZNQ3 347 aa10.74□□□□□ -0.69
SCAF4-205ENST00000472318 FCHSD1Q86WN1 690 aa10.74□□□□□ -0.69
SCAF4-205ENST00000472318 MARK1Q9P0L2 795 aa10.74□□□□□ -0.69
SCAF4-205ENST00000472318 RBM19Q9Y4C8 960 aaKnown RBP10.74□□□□□ -0.69
SCAF4-205ENST00000472318 ARHGAP35Q9NRY4 1499 aa10.74□□□□□ -0.69
SCAF4-205ENST00000472318 ARHGAP23Q9P227 1491 aa10.74□□□□□ -0.69
SCAF4-205ENST00000472318 LRRIQ1Q96JM4 1722 aa10.73□□□□□ -0.69
SCAF4-205ENST00000472318 AMPD1P23109 780 aa10.73□□□□□ -0.69
SCAF4-205ENST00000472318 PLA2G4EQ3MJ16 856 aa10.73□□□□□ -0.69
SCAF4-205ENST00000472318 RHPN1Q8TCX5 695 aa10.73□□□□□ -0.69
SCAF4-205ENST00000472318 QTRT2Q9H974 415 aaKnown RBP10.73□□□□□ -0.69
SCAF4-205ENST00000472318 RRAGCQ9HB90 399 aa10.73□□□□□ -0.69
SCAF4-205ENST00000472318 CHMP3Q9Y3E7 222 aa10.73□□□□□ -0.69
SCAF4-205ENST00000472318 ATAD2Q6PL18 1390 aa10.73□□□□□ -0.69
SCAF4-205ENST00000472318 DGKGP49619 791 aa10.72□□□□□ -0.69
SCAF4-205ENST00000472318 SEC13P55735 322 aa10.72□□□□□ -0.69
SCAF4-205ENST00000472318 LINC00114Q6XXX2 140 aa10.72□□□□□ -0.69
SCAF4-205ENST00000472318 STAG2Q8N3U4 1231 aa10.72□□□□□ -0.69
SCAF4-205ENST00000472318 BTBD6Q96KE9 485 aa10.72□□□□□ -0.69
SCAF4-205ENST00000472318 CFDP1Q9UEE9 299 aaPredicted RBP10.72□□□□□ -0.69
SCAF4-205ENST00000472318 ZNF644Q9H582 1327 aaPredicted RBP10.72□□□□□ -0.69
SCAF4-205ENST00000472318 MSH6P52701 1360 aa10.72□□□□□ -0.69
SCAF4-205ENST00000472318 ADGBQ8N7X0 1667 aa10.72□□□□□ -0.69
SCAF4-205ENST00000472318 SLIT1O75093 1534 aa10.71□□□□□ -0.69
SCAF4-205ENST00000472318 ITGB2P05107 769 aa10.71□□□□□ -0.69
SCAF4-205ENST00000472318 PRDM15P57071 1507 aaPredicted RBP10.71□□□□□ -0.69
SCAF4-205ENST00000472318 PTK7Q13308 1070 aa10.71□□□□□ -0.69
SCAF4-205ENST00000472318 CRTC2Q53ET0 693 aaPredicted RBP10.71□□□□□ -0.69
SCAF4-205ENST00000472318 KANK4Q5T7N3 995 aaPredicted RBP10.71□□□□□ -0.69
SCAF4-205ENST00000472318 PLEKHH2Q8IVE3 1493 aa10.71□□□□□ -0.69
SCAF4-205ENST00000472318 PHACTR1Q9C0D0 580 aa10.71□□□□□ -0.69
SCAF4-205ENST00000472318 ERVK-7P63135 1459 aa10.7□□□□□ -0.7
SCAF4-205ENST00000472318 PPP1R12BO60237 982 aaPredicted RBP10.7□□□□□ -0.7
SCAF4-205ENST00000472318 ALYREFQ86V81 257 aaKnown RBP10.7□□□□□ -0.7
SCAF4-205ENST00000472318 SLC26A8Q96RN1 970 aa10.7□□□□□ -0.7
SCAF4-205ENST00000472318 MBD5Q9P267 1494 aa10.69□□□□□ -0.7
SCAF4-205ENST00000472318 FAM196BA6NMK8 535 aa10.69□□□□□ -0.7
SCAF4-205ENST00000472318 COL8A1P27658 744 aa10.69□□□□□ -0.7
SCAF4-205ENST00000472318 PCBP4P57723 403 aaKnown RBP10.69□□□□□ -0.7
SCAF4-205ENST00000472318 LARP1Q6PKG0 1096 aaKnown RBP10.69□□□□□ -0.7
SCAF4-205ENST00000472318 CHSY3Q70JA7 882 aa10.69□□□□□ -0.7
SCAF4-205ENST00000472318 GAS2L2Q8NHY3 880 aa10.69□□□□□ -0.7
SCAF4-205ENST00000472318 C2orf49Q9BVC5 232 aaPredicted RBP10.69□□□□□ -0.7
SCAF4-205ENST00000472318 NEUROD4Q9HD90 331 aa10.69□□□□□ -0.7
SCAF4-205ENST00000472318 PRR12Q9ULL5 1215 aa10.69□□□□□ -0.7
SCAF4-205ENST00000472318 TIAM1Q13009 1591 aa10.69□□□□□ -0.7
SCAF4-205ENST00000472318 RTEL1-TNFRSF6BF6WH68 1400 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 USP17L15C9J2P7 530 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 USP17L10C9JJH3 530 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 USP17L13C9JLJ4 530 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 USP17L12C9JPN9 530 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 USP17L11C9JVI0 530 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 USP17L21D6R901 530 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 USP17L18D6R9N7 530 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 USP17L22D6RA61 530 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 USP17L17D6RBQ6 530 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 USP17L19D6RCP7 530 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 USP17L20D6RJB6 530 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 GNB5O14775 395 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 USP17L24Q0WX57 530 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 HSH2DQ96JZ2 352 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 C8orf37Q96NL8 207 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 MDFIQ99750 246 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 HCN4Q9Y3Q4 1203 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 EID1Q9Y6B2 187 aa10.68□□□□□ -0.7
SCAF4-205ENST00000472318 UBR1Q8IWV7 1749 aa10.67□□□□□ -0.7
SCAF4-205ENST00000472318 SHPRHQ149N8 1683 aa10.67□□□□□ -0.7
SCAF4-205ENST00000472318 PIK3R2O00459 728 aa10.67□□□□□ -0.7
SCAF4-205ENST00000472318 TYRO3Q06418 890 aa10.66□□□□□ -0.7
SCAF4-205ENST00000472318 DPYDQ12882 1025 aa10.66□□□□□ -0.7
SCAF4-205ENST00000472318 GRIN2CQ14957 1233 aa10.66□□□□□ -0.7
SCAF4-205ENST00000472318 SYT9Q86SS6 491 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms