RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TWISTNBQ3B726 338 aaPredicted RBP10.43□□□□□ -0.74
USP48-207ENST00000471752 GRIPAP1Q4V328 841 aa10.43□□□□□ -0.74
USP48-207ENST00000471752 RBM26Q5T8P6 1007 aaKnown RBP10.43□□□□□ -0.74
USP48-207ENST00000471752 CCDC30Q5VVM6 783 aa10.43□□□□□ -0.74
USP48-207ENST00000471752 CYP4F22Q6NT55 531 aa10.43□□□□□ -0.74
USP48-207ENST00000471752 KSR2Q6VAB6 950 aa10.43□□□□□ -0.74
USP48-207ENST00000471752 USP50Q70EL3 339 aaPredicted RBP10.43□□□□□ -0.74
USP48-207ENST00000471752 USP48Q86UV5 1035 aa10.43□□□□□ -0.74
USP48-207ENST00000471752 CCDC191Q8NCU4 936 aa10.43□□□□□ -0.74
USP48-207ENST00000471752 MXD3Q9BW11 206 aa10.43□□□□□ -0.74
USP48-207ENST00000471752 GREM2Q9H772 168 aa10.43□□□□□ -0.74
USP48-207ENST00000471752 ADARB2Q9NS39 739 aaKnown RBP10.43□□□□□ -0.74
USP48-207ENST00000471752 CWC25Q9NXE8 425 aaPredicted RBP10.43□□□□□ -0.74
USP48-207ENST00000471752 SCAF8Q9UPN6 1271 aaKnown RBP10.43□□□□□ -0.74
USP48-207ENST00000471752 ANKRD36CQ5JPF3 1778 aa10.42□□□□□ -0.74
USP48-207ENST00000471752 RASSF10A6NK89 507 aa10.42□□□□□ -0.74
USP48-207ENST00000471752 SNAP23O00161 211 aa10.42□□□□□ -0.74
USP48-207ENST00000471752 ECE2O60344 883 aa10.42□□□□□ -0.74
USP48-207ENST00000471752 VAMP4O75379 141 aa10.42□□□□□ -0.74
USP48-207ENST00000471752 CASP7P55210 303 aa10.42□□□□□ -0.74
USP48-207ENST00000471752 GRM1Q13255 1194 aa10.42□□□□□ -0.74
USP48-207ENST00000471752 CCDC27Q2M243 656 aa10.42□□□□□ -0.74
USP48-207ENST00000471752 TBC1D10BQ4KMP7 808 aaPredicted RBP10.42□□□□□ -0.74
USP48-207ENST00000471752 TXNRD3Q86VQ6 643 aa10.42□□□□□ -0.74
USP48-207ENST00000471752 MICALL2Q8IY33 904 aa10.42□□□□□ -0.74
USP48-207ENST00000471752 SUPT20HQ8NEM7 779 aa10.42□□□□□ -0.74
USP48-207ENST00000471752 TTLL11Q8NHH1 800 aa10.42□□□□□ -0.74
USP48-207ENST00000471752 BCL2L13Q9BXK5 485 aa10.42□□□□□ -0.74
USP48-207ENST00000471752 TMX4Q9H1E5 349 aaPredicted RBP10.42□□□□□ -0.74
USP48-207ENST00000471752 VPS33BQ9H267 617 aa10.42□□□□□ -0.74
USP48-207ENST00000471752 WBP1LQ9NX94 342 aa10.42□□□□□ -0.74
USP48-207ENST00000471752 PGAP2Q9UHJ9 254 aa10.42□□□□□ -0.74
USP48-207ENST00000471752 ABT1Q9ULW3 272 aaKnown RBP10.42□□□□□ -0.74
USP48-207ENST00000471752 WDR33Q9C0J8 1336 aaKnown RBP10.41□□□□□ -0.74
USP48-207ENST00000471752 FANCIQ9NVI1 1328 aa10.41□□□□□ -0.74
USP48-207ENST00000471752 NEURL1BA8MQ27 555 aa10.41□□□□□ -0.74
USP48-207ENST00000471752 F6X3S4 739 aa10.41□□□□□ -0.74
USP48-207ENST00000471752 H7C1W4 665 aa10.41□□□□□ -0.74
USP48-207ENST00000471752 PDE8AO60658 829 aa10.41□□□□□ -0.74
USP48-207ENST00000471752 KLRK1P26718 216 aa10.41□□□□□ -0.74
USP48-207ENST00000471752 FAM9BQ8IZU0 186 aa10.41□□□□□ -0.74
USP48-207ENST00000471752 TNS4Q8IZW8 715 aa10.41□□□□□ -0.74
USP48-207ENST00000471752 UFL1O94874 794 aa10.4□□□□□ -0.74
USP48-207ENST00000471752 CELF2O95319 508 aaKnown RBP10.4□□□□□ -0.74
USP48-207ENST00000471752 CALD1Q05682 793 aaKnown RBP10.4□□□□□ -0.74
USP48-207ENST00000471752 FLIIQ13045 1269 aa10.4□□□□□ -0.74
USP48-207ENST00000471752 TNIP1Q15025 636 aa10.4□□□□□ -0.74
USP48-207ENST00000471752 EPHA10Q5JZY3 1008 aa10.4□□□□□ -0.74
USP48-207ENST00000471752 UBE3BQ7Z3V4 1068 aa10.4□□□□□ -0.74
USP48-207ENST00000471752 PODXL2Q9NZ53 605 aa10.4□□□□□ -0.74
USP48-207ENST00000471752 ANKIB1Q9P2G1 1089 aa10.4□□□□□ -0.74
USP48-207ENST00000471752 TSKSQ9UJT2 592 aa10.4□□□□□ -0.74
USP48-207ENST00000471752 MINPP1Q9UNW1 487 aa10.4□□□□□ -0.74
USP48-207ENST00000471752 ADM5C9JUS6 153 aa10.39□□□□□ -0.75
USP48-207ENST00000471752 VIL1P09327 827 aaKnown RBP10.39□□□□□ -0.75
USP48-207ENST00000471752 LBX1P52954 281 aa10.39□□□□□ -0.75
USP48-207ENST00000471752 CTSWP56202 376 aa10.39□□□□□ -0.75
USP48-207ENST00000471752 GCKRQ14397 625 aa10.39□□□□□ -0.75
USP48-207ENST00000471752 CCDC152Q4G0S7 254 aa10.39□□□□□ -0.75
USP48-207ENST00000471752 CAPNS2Q96L46 248 aa10.39□□□□□ -0.75
USP48-207ENST00000471752 ZNF408Q9H9D4 720 aa10.39□□□□□ -0.75
USP48-207ENST00000471752 ANP32CO43423 234 aa10.38□□□□□ -0.75
USP48-207ENST00000471752 PAXIP1Q6ZW49 1069 aaPredicted RBP10.38□□□□□ -0.75
USP48-207ENST00000471752 TMC4Q7Z404 712 aa10.38□□□□□ -0.75
USP48-207ENST00000471752 SAPCD2Q86UD0 394 aa10.38□□□□□ -0.75
USP48-207ENST00000471752 GMLQ99445 158 aa10.38□□□□□ -0.75
USP48-207ENST00000471752 ZC3H12CQ9C0D7 883 aaKnown RBP10.38□□□□□ -0.75
USP48-207ENST00000471752 GGA1Q9UJY5 639 aa10.38□□□□□ -0.75
USP48-207ENST00000471752 TLL2Q9Y6L7 1015 aa10.38□□□□□ -0.75
USP48-207ENST00000471752 IL16Q14005 1332 aa10.37□□□□□ -0.75
USP48-207ENST00000471752 CDHR2Q9BYE9 1310 aa10.37□□□□□ -0.75
USP48-207ENST00000471752 H7C1D1 291 aa10.37□□□□□ -0.75
USP48-207ENST00000471752 DDX58O95786 925 aaKnown RBP10.37□□□□□ -0.75
USP48-207ENST00000471752 HSPA8P11142 646 aaKnown RBP10.37□□□□□ -0.75
USP48-207ENST00000471752 FAM161AQ3B820 660 aa10.37□□□□□ -0.75
USP48-207ENST00000471752 PRAMEF18Q5VWM3 479 aa10.37□□□□□ -0.75
USP48-207ENST00000471752 ANKRD18AQ8IVF6 992 aa10.37□□□□□ -0.75
USP48-207ENST00000471752 HELBQ8NG08 1087 aaPredicted RBP10.37□□□□□ -0.75
USP48-207ENST00000471752 DPF2Q92785 391 aa10.37□□□□□ -0.75
USP48-207ENST00000471752 STK31Q9BXU1 1019 aa10.37□□□□□ -0.75
USP48-207ENST00000471752 SCN9AQ15858 1988 aa10.37□□□□□ -0.75
USP48-207ENST00000471752 LRRC37AA6NMS7 1700 aa10.36□□□□□ -0.75
USP48-207ENST00000471752 TAF5LO75529 589 aa10.36□□□□□ -0.75
USP48-207ENST00000471752 CSF1RP07333 972 aa10.36□□□□□ -0.75
USP48-207ENST00000471752 FOXO4P98177 505 aa10.36□□□□□ -0.75
USP48-207ENST00000471752 FKBP5Q13451 457 aaPredicted RBP10.36□□□□□ -0.75
USP48-207ENST00000471752 SCARF1Q14162 830 aa10.36□□□□□ -0.75
USP48-207ENST00000471752 BEND3Q5T5X7 828 aa10.36□□□□□ -0.75
USP48-207ENST00000471752 MOB2Q70IA6 237 aa10.36□□□□□ -0.75
USP48-207ENST00000471752 WDR63Q8IWG1 891 aa10.36□□□□□ -0.75
USP48-207ENST00000471752 DNAAF4Q8WXU2 420 aa10.36□□□□□ -0.75
USP48-207ENST00000471752 ZNF594Q96JF6 807 aaPredicted RBP10.36□□□□□ -0.75
USP48-207ENST00000471752 BSDC1Q9NW68 430 aaPredicted RBP10.36□□□□□ -0.75
USP48-207ENST00000471752 ITGA6P23229 1130 aa10.35□□□□□ -0.75
USP48-207ENST00000471752 CCT4P50991 539 aaKnown RBP10.35□□□□□ -0.75
USP48-207ENST00000471752 NBPF9Q3BBW0 867 aa10.35□□□□□ -0.75
USP48-207ENST00000471752 RSBN1LQ6PCB5 846 aaPredicted RBP10.35□□□□□ -0.75
USP48-207ENST00000471752 CDC37L1Q7L3B6 337 aa10.35□□□□□ -0.75
USP48-207ENST00000471752 KRT26Q7Z3Y9 468 aa10.35□□□□□ -0.75
USP48-207ENST00000471752 ZC3H15Q8WU90 426 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms