RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 HELBQ8NG08 1087 aaPredicted RBP23.73■■□□□ 1.39
PSPC1-203ENST00000471658 BSDC1Q9NW68 430 aaPredicted RBP23.73■■□□□ 1.39
PSPC1-203ENST00000471658 KIF1BPQ96EK5 621 aa23.73■■□□□ 1.39
PSPC1-203ENST00000471658 FBXO3Q9UK99 471 aa23.73■■□□□ 1.39
PSPC1-203ENST00000471658 SPEF2Q9C093 1822 aa23.72■■□□□ 1.39
PSPC1-203ENST00000471658 LRP5O75197 1615 aa23.72■■□□□ 1.39
PSPC1-203ENST00000471658 KCNA3P22001 575 aa23.72■■□□□ 1.39
PSPC1-203ENST00000471658 STYK1Q6J9G0 422 aa23.72■■□□□ 1.39
PSPC1-203ENST00000471658 CHD1LQ86WJ1 897 aa23.72■■□□□ 1.39
PSPC1-203ENST00000471658 METTL24Q5JXM2 366 aa23.71■■□□□ 1.39
PSPC1-203ENST00000471658 ERC1Q8IUD2 1116 aa23.71■■□□□ 1.39
PSPC1-203ENST00000471658 MINPP1Q9UNW1 487 aa23.71■■□□□ 1.39
PSPC1-203ENST00000471658 KIF13BQ9NQT8 1826 aa23.71■■□□□ 1.39
PSPC1-203ENST00000471658 TAF5LO75529 589 aa23.7■■□□□ 1.38
PSPC1-203ENST00000471658 BBOX1O75936 387 aa23.7■■□□□ 1.38
PSPC1-203ENST00000471658 ALDH1B1P30837 517 aa23.7■■□□□ 1.38
PSPC1-203ENST00000471658 TGFB2P61812 414 aa23.7■■□□□ 1.38
PSPC1-203ENST00000471658 CHRNDQ07001 517 aa23.7■■□□□ 1.38
PSPC1-203ENST00000471658 CEP126Q9P2H0 1117 aa23.7■■□□□ 1.38
PSPC1-203ENST00000471658 CD2APQ9Y5K6 639 aa23.7■■□□□ 1.38
PSPC1-203ENST00000471658 SNAP23O00161 211 aa23.69■■□□□ 1.38
PSPC1-203ENST00000471658 PDE4AP27815 886 aa23.69■■□□□ 1.38
PSPC1-203ENST00000471658 VGLL2Q8N8G2 317 aa23.69■■□□□ 1.38
PSPC1-203ENST00000471658 OTUD7AQ8TE49 926 aaPredicted RBP23.69■■□□□ 1.38
PSPC1-203ENST00000471658 WTIPA6NIX2 430 aaPredicted RBP23.68■■□□□ 1.38
PSPC1-203ENST00000471658 PPEF1O14829 653 aaPredicted RBP23.68■■□□□ 1.38
PSPC1-203ENST00000471658 OLFM4Q6UX06 510 aa23.68■■□□□ 1.38
PSPC1-203ENST00000471658 WWC3Q9ULE0 1092 aa23.68■■□□□ 1.38
PSPC1-203ENST00000471658 MROH5Q6ZUA9 1318 aa23.68■■□□□ 1.38
PSPC1-203ENST00000471658 NLGN2Q8NFZ4 835 aa23.67■■□□□ 1.38
PSPC1-203ENST00000471658 EAF2Q96CJ1 260 aaPredicted RBP23.67■■□□□ 1.38
PSPC1-203ENST00000471658 ZBTB47Q9UFB7 747 aaPredicted RBP23.67■■□□□ 1.38
PSPC1-203ENST00000471658 KIAA1551Q9HCM1 1747 aa23.67■■□□□ 1.38
PSPC1-203ENST00000471658 PRPF40BQ6NWY9 871 aaKnown RBP23.66■■□□□ 1.38
PSPC1-203ENST00000471658 CNKSR1Q969H4 720 aa23.66■■□□□ 1.38
PSPC1-203ENST00000471658 CCDC8Q9H0W5 538 aaPredicted RBP23.66■■□□□ 1.38
PSPC1-203ENST00000471658 ZNF219Q9P2Y4 722 aaPredicted RBP23.66■■□□□ 1.38
PSPC1-203ENST00000471658 PDE8BO95263 885 aa23.66■■□□□ 1.38
PSPC1-203ENST00000471658 TIMM10P62072 90 aa23.66■■□□□ 1.38
PSPC1-203ENST00000471658 TNNI3KQ59H18 835 aa23.66■■□□□ 1.38
PSPC1-203ENST00000471658 FPGT-TNNI3KV9GXZ4 949 aa23.66■■□□□ 1.38
PSPC1-203ENST00000471658 AACSQ86V21 672 aa23.65■■□□□ 1.38
PSPC1-203ENST00000471658 CLASRPQ8N2M8 674 aaKnown RBP23.65■■□□□ 1.38
PSPC1-203ENST00000471658 FHDC1Q9C0D6 1143 aaPredicted RBP23.64■■□□□ 1.38
PSPC1-203ENST00000471658 TLR7Q9NYK1 1049 aaKnown RBP23.64■■□□□ 1.38
PSPC1-203ENST00000471658 ATP6V0A2Q9Y487 856 aa23.64■■□□□ 1.38
PSPC1-203ENST00000471658 SLX4Q8IY92 1834 aa23.64■■□□□ 1.37
PSPC1-203ENST00000471658 GPSM2P81274 684 aa23.63■■□□□ 1.37
PSPC1-203ENST00000471658 SP8Q8IXZ3 490 aa23.63■■□□□ 1.37
PSPC1-203ENST00000471658 TTLL6Q8N841 843 aa23.63■■□□□ 1.37
PSPC1-203ENST00000471658 CACNA1SQ13698 1873 aa23.63■■□□□ 1.37
PSPC1-203ENST00000471658 RGS3P49796 1198 aa23.62■■□□□ 1.37
PSPC1-203ENST00000471658 NEUROD6Q96NK8 337 aa23.62■■□□□ 1.37
PSPC1-203ENST00000471658 GPR108Q9NPR9 543 aa23.62■■□□□ 1.37
PSPC1-203ENST00000471658 DLEC1Q9Y238 1755 aa23.62■■□□□ 1.37
PSPC1-203ENST00000471658 A0A1B0GUL7 405 aa23.62■■□□□ 1.37
PSPC1-203ENST00000471658 FGFR2P21802 821 aa23.62■■□□□ 1.37
PSPC1-203ENST00000471658 ATP2B3Q16720 1220 aa23.62■■□□□ 1.37
PSPC1-203ENST00000471658 C7orf43Q8WVR3 580 aa23.62■■□□□ 1.37
PSPC1-203ENST00000471658 PIM2Q9P1W9 311 aa23.62■■□□□ 1.37
PSPC1-203ENST00000471658 TMC4Q7Z404 712 aa23.61■■□□□ 1.37
PSPC1-203ENST00000471658 DBNDD2Q9BQY9 259 aa23.61■■□□□ 1.37
PSPC1-203ENST00000471658 ANKRD2Q9GZV1 360 aa23.61■■□□□ 1.37
PSPC1-203ENST00000471658 ANKIB1Q9P2G1 1089 aa23.61■■□□□ 1.37
PSPC1-203ENST00000471658 NSFL1CQ9UNZ2 370 aaKnown RBP23.61■■□□□ 1.37
PSPC1-203ENST00000471658 ZNF609O15014 1411 aa23.6■■□□□ 1.37
PSPC1-203ENST00000471658 C21orf2O43822 256 aa23.6■■□□□ 1.37
PSPC1-203ENST00000471658 IFIT2P09913 472 aaKnown RBP23.6■■□□□ 1.37
PSPC1-203ENST00000471658 ADORA1P30542 326 aa23.6■■□□□ 1.37
PSPC1-203ENST00000471658 TSHZ3Q63HK5 1081 aa23.6■■□□□ 1.37
PSPC1-203ENST00000471658 DBNLQ9UJU6 430 aaKnown RBP23.6■■□□□ 1.37
PSPC1-203ENST00000471658 AKAP2Q9Y2D5 859 aa23.6■■□□□ 1.37
PSPC1-203ENST00000471658 SALL3Q9BXA9 1300 aa23.59■■□□□ 1.37
PSPC1-203ENST00000471658 PUM3Q15397 648 aaKnown RBP23.59■■□□□ 1.37
PSPC1-203ENST00000471658 PLEKHM2Q8IWE5 1019 aa23.59■■□□□ 1.37
PSPC1-203ENST00000471658 A0A1B0GUL6 1792 aa23.59■■□□□ 1.37
PSPC1-203ENST00000471658 GPR101Q96P66 508 aaPredicted RBP23.59■■□□□ 1.37
PSPC1-203ENST00000471658 XDHP47989 1333 aa23.58■■□□□ 1.37
PSPC1-203ENST00000471658 LPIN2Q92539 896 aa23.58■■□□□ 1.36
PSPC1-203ENST00000471658 XAGE2Q96GT9 111 aa23.58■■□□□ 1.36
PSPC1-203ENST00000471658 SYT17Q9BSW7 474 aa23.58■■□□□ 1.36
PSPC1-203ENST00000471658 KLRK1P26718 216 aa23.57■■□□□ 1.36
PSPC1-203ENST00000471658 DALRD3Q5D0E6 543 aaKnown RBP23.57■■□□□ 1.36
PSPC1-203ENST00000471658 ZNF804BA4D1E1 1349 aa23.56■■□□□ 1.36
PSPC1-203ENST00000471658 LRRC37AA6NMS7 1700 aa23.56■■□□□ 1.36
PSPC1-203ENST00000471658 KCNJ4P48050 445 aa23.56■■□□□ 1.36
PSPC1-203ENST00000471658 UBE4AQ14139 1066 aa23.56■■□□□ 1.36
PSPC1-203ENST00000471658 MPNDQ8N594 471 aa23.56■■□□□ 1.36
PSPC1-203ENST00000471658 PODXL2Q9NZ53 605 aa23.56■■□□□ 1.36
PSPC1-203ENST00000471658 POLLQ9UGP5 575 aa23.56■■□□□ 1.36
PSPC1-203ENST00000471658 SLC5A1P13866 664 aa23.55■■□□□ 1.36
PSPC1-203ENST00000471658 MX1P20591 662 aa23.55■■□□□ 1.36
PSPC1-203ENST00000471658 PDE1AP54750 535 aa23.55■■□□□ 1.36
PSPC1-203ENST00000471658 TBC1D16Q8TBP0 767 aa23.55■■□□□ 1.36
PSPC1-203ENST00000471658 SRCAPQ6ZRS2 3230 aa23.55■■□□□ 1.36
PSPC1-203ENST00000471658 UFL1O94874 794 aa23.55■■□□□ 1.36
PSPC1-203ENST00000471658 TXNRD3Q86VQ6 643 aa23.55■■□□□ 1.36
PSPC1-203ENST00000471658 TMX4Q9H1E5 349 aaPredicted RBP23.55■■□□□ 1.36
PSPC1-203ENST00000471658 GGA1Q9UJY5 639 aa23.55■■□□□ 1.36
PSPC1-203ENST00000471658 BCS1LQ9Y276 419 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms