RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 LRRC27Q9C0I9 530 aa14.89□□□□□ -0.03
PCCB-210ENST00000471595 PRDM10Q9NQV6 1147 aa14.89□□□□□ -0.03
PCCB-210ENST00000471595 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.89□□□□□ -0.03
PCCB-210ENST00000471595 HOXB7P09629 217 aa14.88□□□□□ -0.03
PCCB-210ENST00000471595 CCDC152Q4G0S7 254 aa14.88□□□□□ -0.03
PCCB-210ENST00000471595 CHL1O00533 1208 aa14.88□□□□□ -0.03
PCCB-210ENST00000471595 RNF113AO15541 343 aaKnown RBP14.88□□□□□ -0.03
PCCB-210ENST00000471595 CRACR2BQ8N4Y2 399 aaPredicted RBP14.88□□□□□ -0.03
PCCB-210ENST00000471595 ZCRB1Q8TBF4 217 aaKnown RBP14.88□□□□□ -0.03
PCCB-210ENST00000471595 RTL1A6NKG5 1358 aa14.88□□□□□ -0.03
PCCB-210ENST00000471595 MAGI3Q5TCQ9 1506 aa14.88□□□□□ -0.03
PCCB-210ENST00000471595 TSPY2A6NKD2 308 aa14.88□□□□□ -0.03
PCCB-210ENST00000471595 BAG3O95817 575 aa14.88□□□□□ -0.03
PCCB-210ENST00000471595 SPAG1Q07617 926 aa14.88□□□□□ -0.03
PCCB-210ENST00000471595 CCDC178Q5BJE1 867 aa14.88□□□□□ -0.03
PCCB-210ENST00000471595 RAB11FIP4Q86YS3 637 aa14.88□□□□□ -0.03
PCCB-210ENST00000471595 RTN1Q16799 776 aa14.88□□□□□ -0.03
PCCB-210ENST00000471595 DHX32Q7L7V1 743 aaKnown RBP14.88□□□□□ -0.03
PCCB-210ENST00000471595 ESR2Q92731 530 aa14.88□□□□□ -0.03
PCCB-210ENST00000471595 SPTLC2O15270 562 aa14.87□□□□□ -0.03
PCCB-210ENST00000471595 HOXC9P31274 260 aa14.87□□□□□ -0.03
PCCB-210ENST00000471595 ISM2Q6H9L7 571 aa14.87□□□□□ -0.03
PCCB-210ENST00000471595 AOPEPQ8N6M6 819 aa14.87□□□□□ -0.03
PCCB-210ENST00000471595 MAP3K19Q56UN5 1328 aa14.87□□□□□ -0.03
PCCB-210ENST00000471595 PRC1O43663 620 aa14.87□□□□□ -0.03
PCCB-210ENST00000471595 SYT1P21579 422 aa14.87□□□□□ -0.03
PCCB-210ENST00000471595 CRNKL1Q9BZJ0 848 aaKnown RBP14.87□□□□□ -0.03
PCCB-210ENST00000471595 DMRT2Q9Y5R5 561 aa14.87□□□□□ -0.03
PCCB-210ENST00000471595 BRAPQ7Z569 592 aa14.87□□□□□ -0.03
PCCB-210ENST00000471595 LUZP1Q86V48 1076 aa14.87□□□□□ -0.03
PCCB-210ENST00000471595 NAA15Q9BXJ9 866 aaKnown RBP14.87□□□□□ -0.03
PCCB-210ENST00000471595 SRRTQ9BXP5 876 aaKnown RBP14.87□□□□□ -0.03
PCCB-210ENST00000471595 NBPF7P0C2Y1 421 aaPredicted RBP14.87□□□□□ -0.03
PCCB-210ENST00000471595 SLC39A6Q13433 755 aa14.87□□□□□ -0.03
PCCB-210ENST00000471595 SBNO1A3KN83 1393 aa14.87□□□□□ -0.03
PCCB-210ENST00000471595 POTEJP0CG39 1038 aa14.87□□□□□ -0.03
PCCB-210ENST00000471595 N4BP3O15049 544 aa14.86□□□□□ -0.03
PCCB-210ENST00000471595 ZRSR2Q15696 482 aaKnown RBP14.86□□□□□ -0.03
PCCB-210ENST00000471595 CETN2P41208 172 aa14.86□□□□□ -0.03
PCCB-210ENST00000471595 TDRD12Q587J7 1177 aaKnown RBP14.86□□□□□ -0.03
PCCB-210ENST00000471595 TAX1BP1Q86VP1 789 aa14.86□□□□□ -0.03
PCCB-210ENST00000471595 TTC12Q9H892 705 aaPredicted RBP14.86□□□□□ -0.03
PCCB-210ENST00000471595 PPFIA3O75145 1194 aa14.86□□□□□ -0.03
PCCB-210ENST00000471595 CCDC96Q2M329 555 aa14.86□□□□□ -0.03
PCCB-210ENST00000471595 FAM107BQ9H098 131 aa14.86□□□□□ -0.03
PCCB-210ENST00000471595 POLR3GO15318 223 aaPredicted RBP14.86□□□□□ -0.03
PCCB-210ENST00000471595 ENOX2Q16206 610 aaKnown RBP14.86□□□□□ -0.03
PCCB-210ENST00000471595 IP6K1Q92551 441 aa14.86□□□□□ -0.03
PCCB-210ENST00000471595 CWF19L2Q2TBE0 894 aaKnown RBP14.85□□□□□ -0.03
PCCB-210ENST00000471595 KRT222Q8N1A0 295 aa14.85□□□□□ -0.03
PCCB-210ENST00000471595 KLHL34Q8N239 644 aa14.85□□□□□ -0.03
PCCB-210ENST00000471595 CUL5Q93034 780 aa14.85□□□□□ -0.03
PCCB-210ENST00000471595 GNAT2P19087 354 aa14.85□□□□□ -0.03
PCCB-210ENST00000471595 ZNF445P59923 1031 aa14.85□□□□□ -0.03
PCCB-210ENST00000471595 HELLSQ9NRZ9 838 aa14.85□□□□□ -0.03
PCCB-210ENST00000471595 PTPDC1A2A3K4 754 aa14.85□□□□□ -0.03
PCCB-210ENST00000471595 RNMTO43148 476 aaKnown RBP14.85□□□□□ -0.03
PCCB-210ENST00000471595 DDX21Q9NR30 783 aaKnown RBP eCLIP14.85□□□□□ -0.03
PCCB-210ENST00000471595 CHRNA2Q15822 529 aa14.84□□□□□ -0.03
PCCB-210ENST00000471595 SLC9C2Q5TAH2 1124 aa14.84□□□□□ -0.03
PCCB-210ENST00000471595 G2E3Q7L622 706 aa14.84□□□□□ -0.03
PCCB-210ENST00000471595 RPGRQ92834 1020 aaKnown RBP14.84□□□□□ -0.03
PCCB-210ENST00000471595 GSTO1P78417 241 aa14.84□□□□□ -0.03
PCCB-210ENST00000471595 SLC4A4Q9Y6R1 1079 aa14.84□□□□□ -0.03
PCCB-210ENST00000471595 SBNO2Q9Y2G9 1366 aa14.84□□□□□ -0.03
PCCB-210ENST00000471595 KDM5CP41229 1560 aa14.84□□□□□ -0.03
PCCB-210ENST00000471595 TMX1Q9H3N1 280 aa14.84□□□□□ -0.03
PCCB-210ENST00000471595 IFIT1BQ5T764 474 aaKnown RBP14.84□□□□□ -0.03
PCCB-210ENST00000471595 EHMT1Q9H9B1 1298 aa14.84□□□□□ -0.03
PCCB-210ENST00000471595 KIAA0232Q92628 1395 aa14.84□□□□□ -0.03
PCCB-210ENST00000471595 TFCP2Q12800 502 aa14.84□□□□□ -0.03
PCCB-210ENST00000471595 BICC1Q9H694 974 aaKnown RBP14.84□□□□□ -0.03
PCCB-210ENST00000471595 GNAQP50148 359 aa14.83□□□□□ -0.03
PCCB-210ENST00000471595 CCDC40Q4G0X9 1142 aa14.83□□□□□ -0.03
PCCB-210ENST00000471595 CKAP4Q07065 602 aaKnown RBP14.83□□□□□ -0.04
PCCB-210ENST00000471595 RRAGBQ5VZM2 374 aa14.83□□□□□ -0.04
PCCB-210ENST00000471595 OTUD7AQ8TE49 926 aaPredicted RBP14.83□□□□□ -0.04
PCCB-210ENST00000471595 TRIM47Q96LD4 638 aa14.83□□□□□ -0.04
PCCB-210ENST00000471595 SLU7O95391 586 aaKnown RBP14.83□□□□□ -0.04
PCCB-210ENST00000471595 DESP17661 470 aa14.83□□□□□ -0.04
PCCB-210ENST00000471595 CYP7A1P22680 504 aa14.83□□□□□ -0.04
PCCB-210ENST00000471595 RPS6KB1P23443 525 aa14.83□□□□□ -0.04
PCCB-210ENST00000471595 SMARCC1Q92922 1105 aaPredicted RBP14.83□□□□□ -0.04
PCCB-210ENST00000471595 DCAF5Q96JK2 942 aa14.83□□□□□ -0.04
PCCB-210ENST00000471595 CALM1P0DP23 149 aa14.83□□□□□ -0.04
PCCB-210ENST00000471595 CALM2P0DP24 149 aa14.83□□□□□ -0.04
PCCB-210ENST00000471595 CALM3P0DP25 149 aa14.83□□□□□ -0.04
PCCB-210ENST00000471595 GBP2P32456 591 aaPredicted RBP14.83□□□□□ -0.04
PCCB-210ENST00000471595 APOBRQ0VD83 1088 aa14.83□□□□□ -0.04
PCCB-210ENST00000471595 LRRC59Q96AG4 307 aaKnown RBP14.83□□□□□ -0.04
PCCB-210ENST00000471595 EXOC1Q9NV70 894 aa14.83□□□□□ -0.04
PCCB-210ENST00000471595 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.83□□□□□ -0.04
PCCB-210ENST00000471595 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.83□□□□□ -0.045e-7■■□□□ 13.3
PCCB-210ENST00000471595 RTL9Q8NET4 1388 aa14.82□□□□□ -0.04
PCCB-210ENST00000471595 RBSNQ9H1K0 784 aa14.82□□□□□ -0.04
PCCB-210ENST00000471595 DNAI1Q9UI46 699 aa14.82□□□□□ -0.04
PCCB-210ENST00000471595 KDM5DQ9BY66 1539 aa14.82□□□□□ -0.04
PCCB-210ENST00000471595 MARCKSP29966 332 aaPredicted RBP14.82□□□□□ -0.04
PCCB-210ENST00000471595 TUBB4BP68371 445 aa14.82□□□□□ -0.04
PCCB-210ENST00000471595 UBA5Q9GZZ9 404 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms