RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 FBXO33Q7Z6M2 555 aa3.81□□□□□ -1.8
CCNL1-214ENST00000471247 PCDHB11Q9Y5F2 797 aa3.81□□□□□ -1.8
CCNL1-214ENST00000471247 ADGRL1O94910 1474 aa3.81□□□□□ -1.8
CCNL1-214ENST00000471247 ROBO1Q9Y6N7 1651 aa3.81□□□□□ -1.8
CCNL1-214ENST00000471247 ATP2B4P23634 1241 aa3.81□□□□□ -1.8
CCNL1-214ENST00000471247 CACNA1FO60840 1977 aa3.81□□□□□ -1.8
CCNL1-214ENST00000471247 NRG2O14511 850 aaPredicted RBP3.81□□□□□ -1.8
CCNL1-214ENST00000471247 ARHGAP4P98171 946 aa3.81□□□□□ -1.8
CCNL1-214ENST00000471247 ZNF784Q8NCA9 323 aaPredicted RBP3.81□□□□□ -1.8
CCNL1-214ENST00000471247 RNF123Q5XPI4 1314 aa3.81□□□□□ -1.8
CCNL1-214ENST00000471247 ZNF644Q9H582 1327 aaPredicted RBP3.81□□□□□ -1.8
CCNL1-214ENST00000471247 NPC1L1Q9UHC9 1359 aa3.8□□□□□ -1.8
CCNL1-214ENST00000471247 FMR1Q06787 632 aaKnown RBP eCLIP3.8□□□□□ -1.8
CCNL1-214ENST00000471247 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.8□□□□□ -1.86e-15■■■■■ 65.2
CCNL1-214ENST00000471247 SCN11AQ9UI33 1791 aa3.8□□□□□ -1.8
CCNL1-214ENST00000471247 SCAF11Q99590 1463 aaKnown RBP3.8□□□□□ -1.8
CCNL1-214ENST00000471247 A6NJY4 79 aa3.8□□□□□ -1.8
CCNL1-214ENST00000471247 CCDC24Q8N4L8 307 aa3.8□□□□□ -1.8
CCNL1-214ENST00000471247 FRMD6Q96NE9 622 aa3.8□□□□□ -1.8
CCNL1-214ENST00000471247 ASB16Q96NS5 453 aa3.8□□□□□ -1.8
CCNL1-214ENST00000471247 CCDC9Q9Y3X0 531 aaKnown RBP3.8□□□□□ -1.8
CCNL1-214ENST00000471247 LAMB4A4D0S4 1761 aa3.8□□□□□ -1.8
CCNL1-214ENST00000471247 YEATS2Q9ULM3 1422 aa3.8□□□□□ -1.8
CCNL1-214ENST00000471247 SOS2Q07890 1332 aaPredicted RBP3.8□□□□□ -1.8
CCNL1-214ENST00000471247 SENP3-EIF4A1A0A087X0R7 540 aa3.8□□□□□ -1.8
CCNL1-214ENST00000471247 SCTRP47872 440 aa3.8□□□□□ -1.8
CCNL1-214ENST00000471247 FGD1P98174 961 aa3.8□□□□□ -1.8
CCNL1-214ENST00000471247 RBM10P98175 930 aaKnown RBP3.8□□□□□ -1.8
CCNL1-214ENST00000471247 ZDHHC1Q8WTX9 485 aa3.8□□□□□ -1.8
CCNL1-214ENST00000471247 CRISPLD1Q9H336 500 aa3.8□□□□□ -1.8
CCNL1-214ENST00000471247 TOGARAM1Q9Y4F4 1720 aa3.8□□□□□ -1.8
CCNL1-214ENST00000471247 LAMC2Q13753 1193 aa3.79□□□□□ -1.8
CCNL1-214ENST00000471247 LINC01559Q495D7 138 aa3.79□□□□□ -1.8
CCNL1-214ENST00000471247 ZNF697Q5TEC3 545 aa3.79□□□□□ -1.8
CCNL1-214ENST00000471247 ILDR2Q71H61 639 aa3.79□□□□□ -1.8
CCNL1-214ENST00000471247 GJD3Q8N144 294 aa3.79□□□□□ -1.8
CCNL1-214ENST00000471247 HSP90AA1P07900 732 aaKnown RBP3.79□□□□□ -1.8
CCNL1-214ENST00000471247 FOXD4L5Q5VV16 416 aaPredicted RBP3.79□□□□□ -1.8
CCNL1-214ENST00000471247 ERICH6BQ5W0A0 696 aa3.79□□□□□ -1.8
CCNL1-214ENST00000471247 SLIT3O75094 1523 aa3.79□□□□□ -1.8
CCNL1-214ENST00000471247 NFAT5O94916 1531 aa3.79□□□□□ -1.8
CCNL1-214ENST00000471247 ATAD2Q6PL18 1390 aa3.79□□□□□ -1.8
CCNL1-214ENST00000471247 NNTQ13423 1086 aa3.79□□□□□ -1.8
CCNL1-214ENST00000471247 QTRT2Q9H974 415 aaKnown RBP3.79□□□□□ -1.8
CCNL1-214ENST00000471247 KIAA1551Q9HCM1 1747 aa3.78□□□□□ -1.8
CCNL1-214ENST00000471247 RTN1Q16799 776 aa3.78□□□□□ -1.8
CCNL1-214ENST00000471247 EHBP1Q8NDI1 1231 aa3.78□□□□□ -1.8
CCNL1-214ENST00000471247 BRPF3Q9ULD4 1205 aa3.78□□□□□ -1.8
CCNL1-214ENST00000471247 NOP58Q9Y2X3 529 aaKnown RBP3.78□□□□□ -1.8
CCNL1-214ENST00000471247 FAM135BQ49AJ0 1406 aa3.78□□□□□ -1.8
CCNL1-214ENST00000471247 PSMA6P60900 246 aaKnown RBP3.78□□□□□ -1.8
CCNL1-214ENST00000471247 FKBP5Q13451 457 aaPredicted RBP3.78□□□□□ -1.8
CCNL1-214ENST00000471247 NPAS4Q8IUM7 802 aa3.78□□□□□ -1.8
CCNL1-214ENST00000471247 RGL4Q8IZJ4 473 aa3.78□□□□□ -1.8
CCNL1-214ENST00000471247 LAMB2P55268 1798 aa3.78□□□□□ -1.8
CCNL1-214ENST00000471247 PARD3Q8TEW0 1356 aa3.78□□□□□ -1.8
CCNL1-214ENST00000471247 COL16A1Q07092 1604 aaPredicted RBP3.78□□□□□ -1.81
CCNL1-214ENST00000471247 SFI1A8K8P3 1242 aa3.77□□□□□ -1.81
CCNL1-214ENST00000471247 FAM13AO94988 1023 aa3.77□□□□□ -1.81
CCNL1-214ENST00000471247 COL5A3P25940 1745 aaPredicted RBP3.77□□□□□ -1.81
CCNL1-214ENST00000471247 UBAP2LQ14157 1087 aaKnown RBP3.77□□□□□ -1.81
CCNL1-214ENST00000471247 HIF1AQ16665 826 aa3.77□□□□□ -1.81
CCNL1-214ENST00000471247 PTPRUQ92729 1446 aa3.77□□□□□ -1.81
CCNL1-214ENST00000471247 NDFIP2Q9NV92 336 aa3.77□□□□□ -1.81
CCNL1-214ENST00000471247 CENPCQ03188 943 aa3.77□□□□□ -1.81
CCNL1-214ENST00000471247 TESK2Q96S53 571 aa3.77□□□□□ -1.81
CCNL1-214ENST00000471247 MDFIQ99750 246 aa3.77□□□□□ -1.81
CCNL1-214ENST00000471247 CHMP4BQ9H444 224 aaKnown RBP3.77□□□□□ -1.81
CCNL1-214ENST00000471247 QSER1Q2KHR3 1735 aa3.77□□□□□ -1.81
CCNL1-214ENST00000471247 ADAMTS13Q76LX8 1427 aa3.77□□□□□ -1.81
CCNL1-214ENST00000471247 TNNT2P45379 298 aaPredicted RBP3.77□□□□□ -1.81
CCNL1-214ENST00000471247 ALKBH2Q6NS38 261 aa3.77□□□□□ -1.81
CCNL1-214ENST00000471247 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.77□□□□□ -1.81
CCNL1-214ENST00000471247 IVNS1ABPQ9Y6Y0 642 aa3.77□□□□□ -1.81
CCNL1-214ENST00000471247 TJP1Q07157 1748 aa3.77□□□□□ -1.81
CCNL1-214ENST00000471247 LAMB1P07942 1786 aa3.77□□□□□ -1.81
CCNL1-214ENST00000471247 C11orf95C9JLR9 678 aaPredicted RBP3.76□□□□□ -1.81
CCNL1-214ENST00000471247 FZD6O60353 706 aa3.76□□□□□ -1.81
CCNL1-214ENST00000471247 RPLP1P05386 114 aaKnown RBP3.76□□□□□ -1.81
CCNL1-214ENST00000471247 FKBP4Q02790 459 aaKnown RBP eCLIP3.76□□□□□ -1.81
CCNL1-214ENST00000471247 NBPF8Q3BBV2 869 aa3.76□□□□□ -1.81
CCNL1-214ENST00000471247 RHBDD1Q8TEB9 315 aa3.76□□□□□ -1.81
CCNL1-214ENST00000471247 TSEN34Q9BSV6 310 aaKnown RBP3.76□□□□□ -1.81
CCNL1-214ENST00000471247 KIF15Q9NS87 1388 aa3.76□□□□□ -1.81
CCNL1-214ENST00000471247 CPSF1Q10570 1443 aaKnown RBP3.76□□□□□ -1.81
CCNL1-214ENST00000471247 A0A1W2PRU2 124 aa3.76□□□□□ -1.81
CCNL1-214ENST00000471247 C11orf91Q3C1V1 193 aa3.76□□□□□ -1.81
CCNL1-214ENST00000471247 NLRP8Q86W28 1048 aa3.76□□□□□ -1.81
CCNL1-214ENST00000471247 NANOS1Q8WY41 292 aaKnown RBP3.76□□□□□ -1.81
CCNL1-214ENST00000471247 DMRTB1Q96MA1 342 aa3.76□□□□□ -1.81
CCNL1-214ENST00000471247 TMPRSS4Q9NRS4 437 aa3.76□□□□□ -1.81
CCNL1-214ENST00000471247 RFX1P22670 979 aa3.75□□□□□ -1.81
CCNL1-214ENST00000471247 FSHRP23945 695 aa3.75□□□□□ -1.81
CCNL1-214ENST00000471247 NOS2P35228 1153 aa3.75□□□□□ -1.81
CCNL1-214ENST00000471247 NPAS3Q8IXF0 933 aa3.75□□□□□ -1.81
CCNL1-214ENST00000471247 DCTN4Q9UJW0 460 aa3.75□□□□□ -1.81
CCNL1-214ENST00000471247 ANKRD36CQ5JPF3 1778 aa3.75□□□□□ -1.81
CCNL1-214ENST00000471247 NUP155O75694 1391 aa3.75□□□□□ -1.81
CCNL1-214ENST00000471247 RGPD3A6NKT7 1758 aaPredicted RBP3.75□□□□□ -1.81
CCNL1-214ENST00000471247 RGPD4Q7Z3J3 1758 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms