RNA–Protein interactions for RNA: ENST00000470950.1

LDLRAP1-203, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-203ENST00000470950 NECTIN2Q92692 538 aa17.67■□□□□ 0.42
LDLRAP1-203ENST00000470950 VIL1P09327 827 aaKnown RBP17.66■□□□□ 0.42
LDLRAP1-203ENST00000470950 SF3B3Q15393 1217 aaKnown RBP17.66■□□□□ 0.42
LDLRAP1-203ENST00000470950 MAPK8IP3Q9UPT6 1336 aa17.66■□□□□ 0.42
LDLRAP1-203ENST00000470950 FKBP1BP68106 108 aa17.65■□□□□ 0.42
LDLRAP1-203ENST00000470950 TBC1D16Q8TBP0 767 aa17.65■□□□□ 0.42
LDLRAP1-203ENST00000470950 PNNQ9H307 717 aaKnown RBP17.65■□□□□ 0.42
LDLRAP1-203ENST00000470950 HDAC9Q9UKV0 1011 aa17.65■□□□□ 0.42
LDLRAP1-203ENST00000470950 DDX60Q8IY21 1712 aaKnown RBP17.64■□□□□ 0.41
LDLRAP1-203ENST00000470950 SCARF1Q14162 830 aa17.64■□□□□ 0.41
LDLRAP1-203ENST00000470950 ANGEL2Q5VTE6 544 aaKnown RBP17.64■□□□□ 0.41
LDLRAP1-203ENST00000470950 ZNF296Q8WUU4 475 aaPredicted RBP17.64■□□□□ 0.41
LDLRAP1-203ENST00000470950 FAM89AQ96GI7 184 aa17.64■□□□□ 0.41
LDLRAP1-203ENST00000470950 BABAM1Q9NWV8 329 aa17.64■□□□□ 0.41
LDLRAP1-203ENST00000470950 TBC1D8O95759 1140 aa17.63■□□□□ 0.41
LDLRAP1-203ENST00000470950 ZNF280AP59817 542 aaPredicted RBP17.63■□□□□ 0.41
LDLRAP1-203ENST00000470950 ZC3H12CQ9C0D7 883 aaKnown RBP17.63■□□□□ 0.41
LDLRAP1-203ENST00000470950 COL4A1P02462 1669 aa17.63■□□□□ 0.41
LDLRAP1-203ENST00000470950 SCN9AQ15858 1988 aa17.62■□□□□ 0.41
LDLRAP1-203ENST00000470950 ISCA1Q9BUE6 129 aa17.62■□□□□ 0.41
LDLRAP1-203ENST00000470950 G3V3G9 751 aa17.61■□□□□ 0.41
LDLRAP1-203ENST00000470950 RIPK4P57078 832 aa17.61■□□□□ 0.41
LDLRAP1-203ENST00000470950 RPS8P62241 208 aaKnown RBP17.61■□□□□ 0.41
LDLRAP1-203ENST00000470950 DCAF8Q5TAQ9 597 aa17.61■□□□□ 0.41
LDLRAP1-203ENST00000470950 RSBN1LQ6PCB5 846 aaPredicted RBP17.61■□□□□ 0.41
LDLRAP1-203ENST00000470950 AGBL3Q8NEM8 1001 aa17.61■□□□□ 0.41
LDLRAP1-203ENST00000470950 PLBD2Q8NHP8 589 aa17.61■□□□□ 0.41
LDLRAP1-203ENST00000470950 PODXL2Q9NZ53 605 aa17.61■□□□□ 0.41
LDLRAP1-203ENST00000470950 PAPPA2Q9BXP8 1791 aa17.61■□□□□ 0.41
LDLRAP1-203ENST00000470950 ATP5J2-PTCD1G3V325 749 aa17.6■□□□□ 0.41
LDLRAP1-203ENST00000470950 MOB2Q70IA6 237 aa17.6■□□□□ 0.41
LDLRAP1-203ENST00000470950 ZNF609O15014 1411 aa17.6■□□□□ 0.41
LDLRAP1-203ENST00000470950 PITPNM2Q9BZ72 1349 aa17.59■□□□□ 0.41
LDLRAP1-203ENST00000470950 UBE2Q2LH0YL09 131 aa17.59■□□□□ 0.41
LDLRAP1-203ENST00000470950 UFL1O94874 794 aa17.59■□□□□ 0.41
LDLRAP1-203ENST00000470950 RTL5Q5HYW3 569 aaPredicted RBP17.59■□□□□ 0.41
LDLRAP1-203ENST00000470950 FBXO46Q6PJ61 603 aaPredicted RBP17.59■□□□□ 0.41
LDLRAP1-203ENST00000470950 ANKRD13DQ6ZTN6 518 aa17.59■□□□□ 0.41
LDLRAP1-203ENST00000470950 GCC1Q96CN9 775 aa17.59■□□□□ 0.41
LDLRAP1-203ENST00000470950 CHPF2Q9P2E5 772 aa17.59■□□□□ 0.41
LDLRAP1-203ENST00000470950 GPR25O00155 361 aa17.58■□□□□ 0.4
LDLRAP1-203ENST00000470950 IRS4O14654 1257 aaPredicted RBP17.58■□□□□ 0.4
LDLRAP1-203ENST00000470950 TM4SF4P48230 202 aa17.58■□□□□ 0.4
LDLRAP1-203ENST00000470950 KRT24Q2M2I5 525 aa17.58■□□□□ 0.4
LDLRAP1-203ENST00000470950 NOM1Q5C9Z4 860 aaKnown RBP17.58■□□□□ 0.4
LDLRAP1-203ENST00000470950 MYOZ2Q9NPC6 264 aa17.58■□□□□ 0.4
LDLRAP1-203ENST00000470950 ANKIB1Q9P2G1 1089 aa17.58■□□□□ 0.4
LDLRAP1-203ENST00000470950 GGA1Q9UJY5 639 aa17.58■□□□□ 0.4
LDLRAP1-203ENST00000470950 SCAF8Q9UPN6 1271 aaKnown RBP17.58■□□□□ 0.4
LDLRAP1-203ENST00000470950 USP17L8P0C7I0 530 aa17.57■□□□□ 0.4
LDLRAP1-203ENST00000470950 GMLQ99445 158 aa17.57■□□□□ 0.4
LDLRAP1-203ENST00000470950 SEC31BQ9NQW1 1179 aa17.57■□□□□ 0.4
LDLRAP1-203ENST00000470950 LMOD3Q0VAK6 560 aa17.56■□□□□ 0.4
LDLRAP1-203ENST00000470950 PRAMEF18Q5VWM3 479 aa17.56■□□□□ 0.4
LDLRAP1-203ENST00000470950 TRIM28Q13263 835 aaKnown RBP17.55■□□□□ 0.4
LDLRAP1-203ENST00000470950 TTLL12Q14166 644 aaPredicted RBP17.55■□□□□ 0.4
LDLRAP1-203ENST00000470950 CHL1O00533 1208 aa17.54■□□□□ 0.4
LDLRAP1-203ENST00000470950 FKTNO75072 461 aa17.54■□□□□ 0.4
LDLRAP1-203ENST00000470950 TMPOP42166 694 aaKnown RBP17.54■□□□□ 0.4
LDLRAP1-203ENST00000470950 MKRN3Q13064 507 aaKnown RBP17.54■□□□□ 0.4
LDLRAP1-203ENST00000470950 HDGFL1Q5TGJ6 251 aa17.54■□□□□ 0.4
LDLRAP1-203ENST00000470950 USP17L3A6NCW0 530 aa17.53■□□□□ 0.4
LDLRAP1-203ENST00000470950 USP17L4A6NCW7 530 aa17.53■□□□□ 0.4
LDLRAP1-203ENST00000470950 SREBF2Q12772 1141 aa17.53■□□□□ 0.4
LDLRAP1-203ENST00000470950 NBPF9Q3BBW0 867 aa17.53■□□□□ 0.4
LDLRAP1-203ENST00000470950 HABP4Q5JVS0 413 aaKnown RBP17.53■□□□□ 0.4
LDLRAP1-203ENST00000470950 USP17L1Q7RTZ2 530 aa17.53■□□□□ 0.4
LDLRAP1-203ENST00000470950 ZBTB38Q8NAP3 1195 aaPredicted RBP17.53■□□□□ 0.4
LDLRAP1-203ENST00000470950 CFHR5Q9BXR6 569 aa17.53■□□□□ 0.4
LDLRAP1-203ENST00000470950 DBF4Q9UBU7 674 aaPredicted RBP17.53■□□□□ 0.4
LDLRAP1-203ENST00000470950 PSME4Q14997 1843 aa17.53■□□□□ 0.4
LDLRAP1-203ENST00000470950 PODNQ7Z5L7 613 aa17.52■□□□□ 0.4
LDLRAP1-203ENST00000470950 R3HDMLQ9H3Y0 253 aa17.52■□□□□ 0.4
LDLRAP1-203ENST00000470950 XDHP47989 1333 aa17.51■□□□□ 0.39
LDLRAP1-203ENST00000470950 MKI67P46013 3256 aaKnown RBP17.51■□□□□ 0.39
LDLRAP1-203ENST00000470950 HOXB7P09629 217 aa17.51■□□□□ 0.39
LDLRAP1-203ENST00000470950 HSP90B1P14625 803 aaKnown RBP17.51■□□□□ 0.39
LDLRAP1-203ENST00000470950 NF2P35240 595 aa17.51■□□□□ 0.39
LDLRAP1-203ENST00000470950 HYPKQ9NX55 129 aa17.51■□□□□ 0.39
LDLRAP1-203ENST00000470950 LAS1LQ9Y4W2 734 aaKnown RBP17.51■□□□□ 0.39
LDLRAP1-203ENST00000470950 ATP2B4P23634 1241 aa17.5■□□□□ 0.39
LDLRAP1-203ENST00000470950 CCDC152Q4G0S7 254 aa17.5■□□□□ 0.39
LDLRAP1-203ENST00000470950 WNT10BO00744 389 aa17.49■□□□□ 0.39
LDLRAP1-203ENST00000470950 PTPN12Q05209 780 aaKnown RBP17.49■□□□□ 0.39
LDLRAP1-203ENST00000470950 NEUROD2Q15784 382 aa17.49■□□□□ 0.39
LDLRAP1-203ENST00000470950 ARMC9Q7Z3E5 817 aa17.48■□□□□ 0.39
LDLRAP1-203ENST00000470950 RIC3Q7Z5B4 369 aa17.48■□□□□ 0.39
LDLRAP1-203ENST00000470950 ANKRD18AQ8IVF6 992 aa17.48■□□□□ 0.39
LDLRAP1-203ENST00000470950 OGFOD1Q8N543 542 aa17.48■□□□□ 0.39
LDLRAP1-203ENST00000470950 CCDC85AQ96PX6 553 aaPredicted RBP17.48■□□□□ 0.39
LDLRAP1-203ENST00000470950 MXD3Q9BW11 206 aa17.48■□□□□ 0.39
LDLRAP1-203ENST00000470950 HTTP42858 3142 aa17.47■□□□□ 0.39
LDLRAP1-203ENST00000470950 POTEFA5A3E0 1075 aa17.47■□□□□ 0.39
LDLRAP1-203ENST00000470950 PDE8AO60658 829 aa17.47■□□□□ 0.39
LDLRAP1-203ENST00000470950 ALDH1A1P00352 501 aa17.47■□□□□ 0.39
LDLRAP1-203ENST00000470950 PCCAP05165 728 aaPredicted RBP17.47■□□□□ 0.39
LDLRAP1-203ENST00000470950 PRKG1Q13976 671 aa17.47■□□□□ 0.39
LDLRAP1-203ENST00000470950 DACT2Q5SW24 774 aa17.47■□□□□ 0.39
LDLRAP1-203ENST00000470950 SPRYD7Q5W111 196 aa17.47■□□□□ 0.39
LDLRAP1-203ENST00000470950 INTS3Q68E01 1043 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms