RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 SCN9AQ15858 1988 aa12.01□□□□□ -0.49
CCDC171-204ENST00000470191 ECE2O60344 883 aa12□□□□□ -0.49
CCDC171-204ENST00000470191 LRP10Q7Z4F1 713 aa12□□□□□ -0.49
CCDC171-204ENST00000470191 CSRNP1Q96S65 589 aa12□□□□□ -0.49
CCDC171-204ENST00000470191 SAGE1Q9NXZ1 904 aa12□□□□□ -0.49
CCDC171-204ENST00000470191 GGA3Q9NZ52 723 aa12□□□□□ -0.49
CCDC171-204ENST00000470191 ERBB4Q15303 1308 aa12□□□□□ -0.49
CCDC171-204ENST00000470191 MAPK8IP3Q9UPT6 1336 aa12□□□□□ -0.49
CCDC171-204ENST00000470191 G3V3G9 751 aa11.99□□□□□ -0.49
CCDC171-204ENST00000470191 GPSM2P81274 684 aa11.99□□□□□ -0.49
CCDC171-204ENST00000470191 KIF4BQ2VIQ3 1234 aa11.99□□□□□ -0.49
CCDC171-204ENST00000470191 HSP90AB3PQ58FF7 597 aa11.99□□□□□ -0.49
CCDC171-204ENST00000470191 DCAF8Q5TAQ9 597 aa11.99□□□□□ -0.49
CCDC171-204ENST00000470191 CTU1Q7Z7A3 348 aaKnown RBP11.99□□□□□ -0.49
CCDC171-204ENST00000470191 DPF2Q92785 391 aa11.99□□□□□ -0.49
CCDC171-204ENST00000470191 CELF1Q92879 486 aaKnown RBP11.99□□□□□ -0.49
CCDC171-204ENST00000470191 PLEKHF1Q96S99 279 aa11.99□□□□□ -0.49
CCDC171-204ENST00000470191 POLLQ9UGP5 575 aa11.99□□□□□ -0.49
CCDC171-204ENST00000470191 SCAF8Q9UPN6 1271 aaKnown RBP11.99□□□□□ -0.49
CCDC171-204ENST00000470191 SH3TC1Q8TE82 1336 aa11.99□□□□□ -0.49
CCDC171-204ENST00000470191 PDE4DIPQ5VU43 2346 aa11.99□□□□□ -0.49
CCDC171-204ENST00000470191 RTL9Q8NET4 1388 aa11.98□□□□□ -0.49
CCDC171-204ENST00000470191 SLC10A3P09131 477 aa11.98□□□□□ -0.49
CCDC171-204ENST00000470191 TCIRG1Q13488 830 aa11.98□□□□□ -0.49
CCDC171-204ENST00000470191 SULF1Q8IWU6 871 aa11.98□□□□□ -0.49
CCDC171-204ENST00000470191 CDCA5Q96FF9 252 aa11.98□□□□□ -0.49
CCDC171-204ENST00000470191 FAM89AQ96GI7 184 aa11.98□□□□□ -0.49
CCDC171-204ENST00000470191 ATP5J2-PTCD1G3V325 749 aa11.97□□□□□ -0.49
CCDC171-204ENST00000470191 MYCNP04198 464 aaPredicted RBP11.97□□□□□ -0.49
CCDC171-204ENST00000470191 KRT24Q2M2I5 525 aa11.97□□□□□ -0.49
CCDC171-204ENST00000470191 PRPF38BQ5VTL8 546 aaKnown RBP11.97□□□□□ -0.49
CCDC171-204ENST00000470191 HDAC9Q9UKV0 1011 aa11.97□□□□□ -0.49
CCDC171-204ENST00000470191 HPS5Q9UPZ3 1129 aa11.97□□□□□ -0.49
CCDC171-204ENST00000470191 LAS1LQ9Y4W2 734 aaKnown RBP11.97□□□□□ -0.49
CCDC171-204ENST00000470191 SPEF2Q9C093 1822 aa11.97□□□□□ -0.49
CCDC171-204ENST00000470191 PSME4Q14997 1843 aa11.96□□□□□ -0.49
CCDC171-204ENST00000470191 TBC1D8O95759 1140 aa11.96□□□□□ -0.49
CCDC171-204ENST00000470191 RPS12P25398 132 aaKnown RBP11.96□□□□□ -0.49
CCDC171-204ENST00000470191 RIPK4P57078 832 aa11.96□□□□□ -0.49
CCDC171-204ENST00000470191 ANGEL2Q5VTE6 544 aaKnown RBP11.96□□□□□ -0.49
CCDC171-204ENST00000470191 MOB2Q70IA6 237 aa11.96□□□□□ -0.49
CCDC171-204ENST00000470191 TMC4Q7Z404 712 aa11.96□□□□□ -0.49
CCDC171-204ENST00000470191 RASAL3Q86YV0 1011 aa11.96□□□□□ -0.49
CCDC171-204ENST00000470191 EYA3Q99504 573 aa11.96□□□□□ -0.49
CCDC171-204ENST00000470191 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.96□□□□□ -0.49
CCDC171-204ENST00000470191 MKRN3Q13064 507 aaKnown RBP11.95□□□□□ -0.5
CCDC171-204ENST00000470191 SCARF1Q14162 830 aa11.95□□□□□ -0.5
CCDC171-204ENST00000470191 ZC3H12CQ9C0D7 883 aaKnown RBP11.95□□□□□ -0.5
CCDC171-204ENST00000470191 CHPF2Q9P2E5 772 aa11.95□□□□□ -0.5
CCDC171-204ENST00000470191 PAPPA2Q9BXP8 1791 aa11.95□□□□□ -0.5
CCDC171-204ENST00000470191 UBE2Q2LH0YL09 131 aa11.94□□□□□ -0.5
CCDC171-204ENST00000470191 TTLL12Q14166 644 aaPredicted RBP11.94□□□□□ -0.5
CCDC171-204ENST00000470191 NEUROD2Q15784 382 aa11.94□□□□□ -0.5
CCDC171-204ENST00000470191 PRAMEF18Q5VWM3 479 aa11.94□□□□□ -0.5
CCDC171-204ENST00000470191 TBC1D16Q8TBP0 767 aa11.94□□□□□ -0.5
CCDC171-204ENST00000470191 ANKIB1Q9P2G1 1089 aa11.94□□□□□ -0.5
CCDC171-204ENST00000470191 UFL1O94874 794 aa11.93□□□□□ -0.5
CCDC171-204ENST00000470191 VIL1P09327 827 aaKnown RBP11.93□□□□□ -0.5
CCDC171-204ENST00000470191 ZNF296Q8WUU4 475 aaPredicted RBP11.93□□□□□ -0.5
CCDC171-204ENST00000470191 PNNQ9H307 717 aaKnown RBP11.93□□□□□ -0.5
CCDC171-204ENST00000470191 SEC31BQ9NQW1 1179 aa11.93□□□□□ -0.5
CCDC171-204ENST00000470191 IRS4O14654 1257 aaPredicted RBP11.92□□□□□ -0.5
CCDC171-204ENST00000470191 RPS8P62241 208 aaKnown RBP11.92□□□□□ -0.5
CCDC171-204ENST00000470191 SF3B3Q15393 1217 aaKnown RBP11.92□□□□□ -0.5
CCDC171-204ENST00000470191 ANKRD13DQ6ZTN6 518 aa11.92□□□□□ -0.5
CCDC171-204ENST00000470191 CCDC85AQ96PX6 553 aaPredicted RBP11.92□□□□□ -0.5
CCDC171-204ENST00000470191 PRKG1Q13976 671 aa11.91□□□□□ -0.5
CCDC171-204ENST00000470191 HDGFL1Q5TGJ6 251 aa11.91□□□□□ -0.5
CCDC171-204ENST00000470191 RSBN1LQ6PCB5 846 aaPredicted RBP11.91□□□□□ -0.5
CCDC171-204ENST00000470191 REM2Q8IYK8 340 aaPredicted RBP11.91□□□□□ -0.5
CCDC171-204ENST00000470191 PLBD2Q8NHP8 589 aa11.91□□□□□ -0.5
CCDC171-204ENST00000470191 JARID2Q92833 1246 aaPredicted RBP11.91□□□□□ -0.5
CCDC171-204ENST00000470191 FBXW7Q969H0 707 aa11.91□□□□□ -0.5
CCDC171-204ENST00000470191 ISCA1Q9BUE6 129 aa11.91□□□□□ -0.5
CCDC171-204ENST00000470191 GGA1Q9UJY5 639 aa11.91□□□□□ -0.5
CCDC171-204ENST00000470191 TMPOP42166 694 aaKnown RBP11.9□□□□□ -0.5
CCDC171-204ENST00000470191 CCDC146Q8IYE0 955 aa11.9□□□□□ -0.5
CCDC171-204ENST00000470191 MYOZ2Q9NPC6 264 aa11.9□□□□□ -0.5
CCDC171-204ENST00000470191 GPR25O00155 361 aa11.89□□□□□ -0.51
CCDC171-204ENST00000470191 USP17L8P0C7I0 530 aa11.89□□□□□ -0.51
CCDC171-204ENST00000470191 ZNF280AP59817 542 aaPredicted RBP11.89□□□□□ -0.51
CCDC171-204ENST00000470191 PKN2Q16513 984 aaKnown RBP11.89□□□□□ -0.51
CCDC171-204ENST00000470191 NBPF9Q3BBW0 867 aa11.89□□□□□ -0.51
CCDC171-204ENST00000470191 MXD3Q9BW11 206 aa11.89□□□□□ -0.51
CCDC171-204ENST00000470191 ZNF646O15015 1829 aaPredicted RBP11.88□□□□□ -0.51
CCDC171-204ENST00000470191 WTIPA6NIX2 430 aaPredicted RBP11.88□□□□□ -0.51
CCDC171-204ENST00000470191 FKBP1BP68106 108 aa11.88□□□□□ -0.51
CCDC171-204ENST00000470191 LMOD3Q0VAK6 560 aa11.88□□□□□ -0.51
CCDC171-204ENST00000470191 FBXO46Q6PJ61 603 aaPredicted RBP11.88□□□□□ -0.51
CCDC171-204ENST00000470191 RIC3Q7Z5B4 369 aa11.88□□□□□ -0.51
CCDC171-204ENST00000470191 AGBL3Q8NEM8 1001 aa11.88□□□□□ -0.51
CCDC171-204ENST00000470191 R3HDMLQ9H3Y0 253 aa11.88□□□□□ -0.51
CCDC171-204ENST00000470191 USP17L3A6NCW0 530 aa11.87□□□□□ -0.51
CCDC171-204ENST00000470191 USP17L4A6NCW7 530 aa11.87□□□□□ -0.51
CCDC171-204ENST00000470191 FKTNO75072 461 aa11.87□□□□□ -0.51
CCDC171-204ENST00000470191 USP17L1Q7RTZ2 530 aa11.87□□□□□ -0.51
CCDC171-204ENST00000470191 MYD88Q99836 296 aa11.87□□□□□ -0.51
CCDC171-204ENST00000470191 BABAM1Q9NWV8 329 aa11.87□□□□□ -0.51
CCDC171-204ENST00000470191 PODXL2Q9NZ53 605 aa11.87□□□□□ -0.51
CCDC171-204ENST00000470191 DBF4Q9UBU7 674 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms