RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 MTMR3Q13615 1198 aa10.76□□□□□ -0.69
COL11A1-208ENST00000470170 COL13A1Q5TAT6 717 aaPredicted RBP10.76□□□□□ -0.69
COL11A1-208ENST00000470170 MPSTP25325 297 aa10.75□□□□□ -0.69
COL11A1-208ENST00000470170 GDF6Q6KF10 455 aaPredicted RBP10.75□□□□□ -0.69
COL11A1-208ENST00000470170 TPSG1Q9NRR2 321 aa10.75□□□□□ -0.69
COL11A1-208ENST00000470170 ADGRE1Q14246 886 aa10.74□□□□□ -0.69
COL11A1-208ENST00000470170 MBTPS1Q14703 1052 aa10.74□□□□□ -0.69
COL11A1-208ENST00000470170 TTC39BQ5VTQ0 682 aaPredicted RBP10.74□□□□□ -0.69
COL11A1-208ENST00000470170 PHLDB3Q6NSJ2 640 aa10.74□□□□□ -0.69
COL11A1-208ENST00000470170 EDEM1Q92611 657 aa10.74□□□□□ -0.69
COL11A1-208ENST00000470170 LENG1Q96BZ8 264 aaPredicted RBP10.74□□□□□ -0.69
COL11A1-208ENST00000470170 RBSNQ9H1K0 784 aa10.74□□□□□ -0.69
COL11A1-208ENST00000470170 ABI2Q9NYB9 513 aaPredicted RBP10.74□□□□□ -0.69
COL11A1-208ENST00000470170 CYP2E1P05181 493 aaPredicted RBP10.73□□□□□ -0.69
COL11A1-208ENST00000470170 DNM1Q05193 864 aaKnown RBP10.73□□□□□ -0.69
COL11A1-208ENST00000470170 NOM1Q5C9Z4 860 aaKnown RBP10.73□□□□□ -0.69
COL11A1-208ENST00000470170 FBXO11Q86XK2 927 aa10.73□□□□□ -0.69
COL11A1-208ENST00000470170 DTWD1Q8N5C7 304 aa10.73□□□□□ -0.69
COL11A1-208ENST00000470170 TMEM63CQ9P1W3 806 aa10.73□□□□□ -0.69
COL11A1-208ENST00000470170 TRIM33Q9UPN9 1127 aa10.73□□□□□ -0.69
COL11A1-208ENST00000470170 DEAF1O75398 565 aaPredicted RBP10.72□□□□□ -0.69
COL11A1-208ENST00000470170 EIF1AXP47813 144 aaKnown RBP10.72□□□□□ -0.69
COL11A1-208ENST00000470170 HYAL2Q12891 473 aa10.72□□□□□ -0.69
COL11A1-208ENST00000470170 USP21Q9UK80 565 aa10.72□□□□□ -0.69
COL11A1-208ENST00000470170 ATP11AP98196 1134 aa10.71□□□□□ -0.69
COL11A1-208ENST00000470170 PDE12Q6L8Q7 609 aaKnown RBP10.71□□□□□ -0.69
COL11A1-208ENST00000470170 ZNF438Q7Z4V0 828 aa10.71□□□□□ -0.69
COL11A1-208ENST00000470170 IL22RA1Q8N6P7 574 aa10.71□□□□□ -0.69
COL11A1-208ENST00000470170 ARID3AQ99856 593 aa10.71□□□□□ -0.69
COL11A1-208ENST00000470170 SEMA6BQ9H3T3 888 aa10.71□□□□□ -0.69
COL11A1-208ENST00000470170 ELP3Q9H9T3 547 aa10.71□□□□□ -0.69
COL11A1-208ENST00000470170 A6NHS1 94 aa10.7□□□□□ -0.7
COL11A1-208ENST00000470170 PDGFAP04085 211 aa10.7□□□□□ -0.7
COL11A1-208ENST00000470170 NRG1Q02297 640 aaPredicted RBP10.7□□□□□ -0.7
COL11A1-208ENST00000470170 RSPO4Q2I0M5 234 aaPredicted RBP10.7□□□□□ -0.7
COL11A1-208ENST00000470170 TXNRD3Q86VQ6 643 aa10.7□□□□□ -0.7
COL11A1-208ENST00000470170 SUPT5HO00267 1087 aaKnown RBP10.69□□□□□ -0.7
COL11A1-208ENST00000470170 ITGB7P26010 798 aa10.69□□□□□ -0.7
COL11A1-208ENST00000470170 GGNBP2Q9H3C7 697 aa10.69□□□□□ -0.7
COL11A1-208ENST00000470170 NKAPLQ5M9Q1 402 aa10.68□□□□□ -0.7
COL11A1-208ENST00000470170 SPACA7Q96KW9 195 aa10.68□□□□□ -0.7
COL11A1-208ENST00000470170 RASSF4Q9H2L5 321 aa10.68□□□□□ -0.7
COL11A1-208ENST00000470170 CNTN3Q9P232 1028 aa10.68□□□□□ -0.7
COL11A1-208ENST00000470170 KANSL3Q9P2N6 904 aa10.68□□□□□ -0.7
COL11A1-208ENST00000470170 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.68□□□□□ -0.7
COL11A1-208ENST00000470170 KIF4AO95239 1232 aa10.67□□□□□ -0.7
COL11A1-208ENST00000470170 PCSK2P16519 638 aa10.67□□□□□ -0.7
COL11A1-208ENST00000470170 MZF1P28698 734 aaPredicted RBP10.67□□□□□ -0.7
COL11A1-208ENST00000470170 C8orf34Q49A92 452 aa10.67□□□□□ -0.7
COL11A1-208ENST00000470170 CEP135Q66GS9 1140 aa10.67□□□□□ -0.7
COL11A1-208ENST00000470170 ABL1P00519 1130 aa10.66□□□□□ -0.7
COL11A1-208ENST00000470170 RPLP1P05386 114 aaKnown RBP10.66□□□□□ -0.7
COL11A1-208ENST00000470170 ZNF211Q13398 564 aaPredicted RBP10.66□□□□□ -0.7
COL11A1-208ENST00000470170 NCAPG2Q86XI2 1143 aa10.66□□□□□ -0.7
COL11A1-208ENST00000470170 LACRTQ9GZZ8 138 aa10.66□□□□□ -0.7
COL11A1-208ENST00000470170 ANO2Q9NQ90 1003 aa10.66□□□□□ -0.7
COL11A1-208ENST00000470170 POLIQ9UNA4 740 aa10.66□□□□□ -0.7
COL11A1-208ENST00000470170 DLL1O00548 723 aa10.65□□□□□ -0.7
COL11A1-208ENST00000470170 AAMPQ13685 434 aa10.65□□□□□ -0.7
COL11A1-208ENST00000470170 IGF2-ASQ6U949 168 aa10.65□□□□□ -0.7
COL11A1-208ENST00000470170 ADAMTSL4Q6UY14 1074 aa10.65□□□□□ -0.7
COL11A1-208ENST00000470170 C1orf127Q8N9H9 656 aa10.65□□□□□ -0.7
COL11A1-208ENST00000470170 MTMR7Q9Y216 660 aa10.65□□□□□ -0.7
COL11A1-208ENST00000470170 USTQ9Y2C2 406 aa10.65□□□□□ -0.7
COL11A1-208ENST00000470170 SMNDC1O75940 238 aaKnown RBP eCLIP10.64□□□□□ -0.71
COL11A1-208ENST00000470170 NPR3P17342 541 aa10.64□□□□□ -0.71
COL11A1-208ENST00000470170 SETDB1Q15047 1291 aa10.64□□□□□ -0.71
COL11A1-208ENST00000470170 ALKBH2Q6NS38 261 aa10.64□□□□□ -0.71
COL11A1-208ENST00000470170 XKR5Q6UX68 686 aa10.64□□□□□ -0.71
COL11A1-208ENST00000470170 DYRK3O43781 588 aa10.63□□□□□ -0.71
COL11A1-208ENST00000470170 IREB2P48200 963 aaKnown RBP10.63□□□□□ -0.71
COL11A1-208ENST00000470170 TXNDC11Q6PKC3 985 aa10.63□□□□□ -0.71
COL11A1-208ENST00000470170 CEP120Q8N960 986 aa10.63□□□□□ -0.71
COL11A1-208ENST00000470170 TTC16Q8NEE8 873 aa10.63□□□□□ -0.71
COL11A1-208ENST00000470170 WFDC12Q8WWY7 111 aa10.63□□□□□ -0.71
COL11A1-208ENST00000470170 PBX4Q9BYU1 374 aa10.63□□□□□ -0.71
COL11A1-208ENST00000470170 PPME1Q9Y570 386 aa10.63□□□□□ -0.71
COL11A1-208ENST00000470170 FAM13AO94988 1023 aa10.62□□□□□ -0.71
COL11A1-208ENST00000470170 ACPPP15309 386 aa10.62□□□□□ -0.71
COL11A1-208ENST00000470170 CES1P23141 567 aa10.62□□□□□ -0.71
COL11A1-208ENST00000470170 NOS3P29474 1203 aa10.62□□□□□ -0.71
COL11A1-208ENST00000470170 FKBP4Q02790 459 aaKnown RBP eCLIP10.62□□□□□ -0.71
COL11A1-208ENST00000470170 LINC01387J3KSC0 135 aa10.61□□□□□ -0.71
COL11A1-208ENST00000470170 CDC25BP30305 580 aa10.61□□□□□ -0.71
COL11A1-208ENST00000470170 SF3B2Q13435 895 aaKnown RBP10.61□□□□□ -0.71
COL11A1-208ENST00000470170 CACTIN-AS1Q8N1I8 211 aa10.61□□□□□ -0.71
COL11A1-208ENST00000470170 TP53INP1Q96A56 240 aa10.61□□□□□ -0.71
COL11A1-208ENST00000470170 SSBP4Q9BWG4 385 aaPredicted RBP10.61□□□□□ -0.71
COL11A1-208ENST00000470170 CHRDQ9H2X0 955 aa10.61□□□□□ -0.71
COL11A1-208ENST00000470170 SALL4Q9UJQ4 1053 aa10.61□□□□□ -0.71
COL11A1-208ENST00000470170 FZD6O60353 706 aa10.6□□□□□ -0.71
COL11A1-208ENST00000470170 MUC3BQ9H195 1237 aa10.6□□□□□ -0.71
COL11A1-208ENST00000470170 SRA1Q9HD15 236 aaKnown RBP10.6□□□□□ -0.71
COL11A1-208ENST00000470170 CDC27P30260 824 aa10.59□□□□□ -0.71
COL11A1-208ENST00000470170 ERICH6Q7L0X2 663 aa10.59□□□□□ -0.71
COL11A1-208ENST00000470170 MAP4K3Q8IVH8 894 aa10.59□□□□□ -0.71
COL11A1-208ENST00000470170 GALNT11Q8NCW6 608 aa10.59□□□□□ -0.71
COL11A1-208ENST00000470170 POP1Q99575 1024 aaKnown RBP10.59□□□□□ -0.71
COL11A1-208ENST00000470170 SH2B1Q9NRF2 756 aaPredicted RBP10.59□□□□□ -0.71
COL11A1-208ENST00000470170 CCDC87Q9NVE4 849 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms