RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 LRRC37AA6NMS7 1700 aa15.88■□□□□ 0.13
LSM2-209ENST00000470083 ZNF609O15014 1411 aa15.88■□□□□ 0.13
LSM2-209ENST00000470083 SREBF2Q12772 1141 aa15.88■□□□□ 0.13
LSM2-209ENST00000470083 PDIA6Q15084 440 aa15.88■□□□□ 0.13
LSM2-209ENST00000470083 MOB2Q70IA6 237 aa15.88■□□□□ 0.13
LSM2-209ENST00000470083 THUMPD2Q9BTF0 503 aaKnown RBP15.88■□□□□ 0.13
LSM2-209ENST00000470083 POLR2AP24928 1970 aaKnown RBP15.87■□□□□ 0.13
LSM2-209ENST00000470083 UBE2Q2LH0YL09 131 aa15.87■□□□□ 0.13
LSM2-209ENST00000470083 GPSM2P81274 684 aa15.87■□□□□ 0.13
LSM2-209ENST00000470083 NECTIN2Q92692 538 aa15.87■□□□□ 0.13
LSM2-209ENST00000470083 SZT2Q5T011 3432 aa15.87■□□□□ 0.13
LSM2-209ENST00000470083 ANKRD36CQ5JPF3 1778 aa15.87■□□□□ 0.13
LSM2-209ENST00000470083 KDM3BQ7LBC6 1761 aa15.86■□□□□ 0.13
LSM2-209ENST00000470083 AGBL3Q8NEM8 1001 aa15.86■□□□□ 0.13
LSM2-209ENST00000470083 TBC1D16Q8TBP0 767 aa15.86■□□□□ 0.13
LSM2-209ENST00000470083 CELF1Q92879 486 aaKnown RBP15.86■□□□□ 0.13
LSM2-209ENST00000470083 R3HDMLQ9H3Y0 253 aa15.86■□□□□ 0.13
LSM2-209ENST00000470083 TCIRG1Q13488 830 aa15.85■□□□□ 0.13
LSM2-209ENST00000470083 PROSER3Q2NL68 480 aa15.85■□□□□ 0.13
LSM2-209ENST00000470083 RSBN1LQ6PCB5 846 aaPredicted RBP15.85■□□□□ 0.13
LSM2-209ENST00000470083 LAMB2P55268 1798 aa15.85■□□□□ 0.13
LSM2-209ENST00000470083 SF3B3Q15393 1217 aaKnown RBP15.84■□□□□ 0.13
LSM2-209ENST00000470083 ZC3H12CQ9C0D7 883 aaKnown RBP15.84■□□□□ 0.13
LSM2-209ENST00000470083 MYOZ2Q9NPC6 264 aa15.84■□□□□ 0.13
LSM2-209ENST00000470083 TRIM17Q9Y577 477 aa15.84■□□□□ 0.13
LSM2-209ENST00000470083 ALDH1A1P00352 501 aa15.83■□□□□ 0.12
LSM2-209ENST00000470083 ANXA1P04083 346 aa15.83■□□□□ 0.12
LSM2-209ENST00000470083 MKRN3Q13064 507 aaKnown RBP15.83■□□□□ 0.12
LSM2-209ENST00000470083 TTLL12Q14166 644 aaPredicted RBP15.83■□□□□ 0.12
LSM2-209ENST00000470083 OTOP1Q7RTM1 612 aa15.83■□□□□ 0.12
LSM2-209ENST00000470083 GMLQ99445 158 aa15.83■□□□□ 0.12
LSM2-209ENST00000470083 COLQQ9Y215 455 aaPredicted RBP15.83■□□□□ 0.12
LSM2-209ENST00000470083 KIAA0100Q14667 2235 aaKnown RBP15.83■□□□□ 0.12
LSM2-209ENST00000470083 A0A0C4DFX4 3053 aa15.83■□□□□ 0.12
LSM2-209ENST00000470083 USP17L8P0C7I0 530 aa15.82■□□□□ 0.12
LSM2-209ENST00000470083 EIF2S2P20042 333 aaKnown RBP15.82■□□□□ 0.12
LSM2-209ENST00000470083 PRAMEF18Q5VWM3 479 aa15.82■□□□□ 0.12
LSM2-209ENST00000470083 COPS6Q7L5N1 327 aa15.82■□□□□ 0.12
LSM2-209ENST00000470083 PODXL2Q9NZ53 605 aa15.82■□□□□ 0.12
LSM2-209ENST00000470083 SCAF8Q9UPN6 1271 aaKnown RBP15.82■□□□□ 0.12
LSM2-209ENST00000470083 DDX60Q8IY21 1712 aaKnown RBP15.82■□□□□ 0.12
LSM2-209ENST00000470083 TRIOBPQ9H2D6 2365 aa15.82■□□□□ 0.12
LSM2-209ENST00000470083 G3V3G9 751 aa15.81■□□□□ 0.12
LSM2-209ENST00000470083 NF2P35240 595 aa15.81■□□□□ 0.12
LSM2-209ENST00000470083 DCAF8Q5TAQ9 597 aa15.81■□□□□ 0.12
LSM2-209ENST00000470083 XAGE3Q8WTP9 111 aa15.81■□□□□ 0.12
LSM2-209ENST00000470083 ARMC5Q96C12 935 aa15.81■□□□□ 0.12
LSM2-209ENST00000470083 UFL1O94874 794 aa15.8■□□□□ 0.12
LSM2-209ENST00000470083 NEFMP07197 916 aa15.8■□□□□ 0.12
LSM2-209ENST00000470083 EN2P19622 333 aaPredicted RBP15.8■□□□□ 0.12
LSM2-209ENST00000470083 RPS8P62241 208 aaKnown RBP15.8■□□□□ 0.12
LSM2-209ENST00000470083 AIMP1Q12904 312 aaKnown RBP15.8■□□□□ 0.12
LSM2-209ENST00000470083 RANBP2P49792 3224 aaKnown RBP15.8■□□□□ 0.12
LSM2-209ENST00000470083 SCN9AQ15858 1988 aa15.8■□□□□ 0.12
LSM2-209ENST00000470083 PTPN12Q05209 780 aaKnown RBP15.79■□□□□ 0.12
LSM2-209ENST00000470083 SPRYD7Q5W111 196 aa15.79■□□□□ 0.12
LSM2-209ENST00000470083 TSPYL4Q9UJ04 414 aa15.79■□□□□ 0.12
LSM2-209ENST00000470083 GGA1Q9UJY5 639 aa15.79■□□□□ 0.12
LSM2-209ENST00000470083 PTPN22Q9Y2R2 807 aa15.79■□□□□ 0.12
LSM2-209ENST00000470083 TAF1P21675 1872 aa15.79■□□□□ 0.12
LSM2-209ENST00000470083 PPP2R1AP30153 589 aa15.78■□□□□ 0.12
LSM2-209ENST00000470083 NFE2L2Q16236 605 aa15.78■□□□□ 0.12
LSM2-209ENST00000470083 NBPF9Q3BBW0 867 aa15.78■□□□□ 0.12
LSM2-209ENST00000470083 ARMC9Q7Z3E5 817 aa15.78■□□□□ 0.12
LSM2-209ENST00000470083 FAM89AQ96GI7 184 aa15.78■□□□□ 0.12
LSM2-209ENST00000470083 CEP290O15078 2479 aa15.78■□□□□ 0.12
LSM2-209ENST00000470083 COL4A1P02462 1669 aa15.77■□□□□ 0.12
LSM2-209ENST00000470083 MANSC4A6NHS7 340 aaPredicted RBP15.77■□□□□ 0.12
LSM2-209ENST00000470083 INHBEP58166 350 aa15.77■□□□□ 0.12
LSM2-209ENST00000470083 LDLRAD1Q5T700 205 aa15.77■□□□□ 0.12
LSM2-209ENST00000470083 IFNL1Q8IU54 200 aa15.77■□□□□ 0.12
LSM2-209ENST00000470083 ZNF428Q96B54 188 aa15.77■□□□□ 0.12
LSM2-209ENST00000470083 ERO1AQ96HE7 468 aa15.77■□□□□ 0.12
LSM2-209ENST00000470083 ANKIB1Q9P2G1 1089 aa15.77■□□□□ 0.12
LSM2-209ENST00000470083 USP17L3A6NCW0 530 aa15.76■□□□□ 0.11
LSM2-209ENST00000470083 USP17L4A6NCW7 530 aa15.76■□□□□ 0.11
LSM2-209ENST00000470083 DLL1O00548 723 aa15.76■□□□□ 0.11
LSM2-209ENST00000470083 USP17L1Q7RTZ2 530 aa15.76■□□□□ 0.11
LSM2-209ENST00000470083 PLEKHF1Q96S99 279 aa15.76■□□□□ 0.11
LSM2-209ENST00000470083 RBBP6Q7Z6E9 1792 aaKnown RBP15.75■□□□□ 0.11
LSM2-209ENST00000470083 WNT10BO00744 389 aa15.75■□□□□ 0.11
LSM2-209ENST00000470083 TRIM26Q12899 539 aaPredicted RBP15.75■□□□□ 0.11
LSM2-209ENST00000470083 PODNQ7Z5L7 613 aa15.75■□□□□ 0.11
LSM2-209ENST00000470083 OTUD5Q96G74 571 aa15.75■□□□□ 0.11
LSM2-209ENST00000470083 ISCA1Q9BUE6 129 aa15.75■□□□□ 0.11
LSM2-209ENST00000470083 TMEM106CQ9BVX2 250 aa15.75■□□□□ 0.11
LSM2-209ENST00000470083 IRS4O14654 1257 aaPredicted RBP15.74■□□□□ 0.11
LSM2-209ENST00000470083 OGFOD1Q8N543 542 aa15.74■□□□□ 0.11
LSM2-209ENST00000470083 PLBD2Q8NHP8 589 aa15.74■□□□□ 0.11
LSM2-209ENST00000470083 EFCC1Q9HA90 598 aa15.74■□□□□ 0.11
LSM2-209ENST00000470083 BABAM1Q9NWV8 329 aa15.74■□□□□ 0.11
LSM2-209ENST00000470083 CUL9Q8IWT3 2517 aa15.73■□□□□ 0.11
LSM2-209ENST00000470083 H0YGN5 161 aa15.73■□□□□ 0.11
LSM2-209ENST00000470083 IGF2BP3O00425 579 aaKnown RBP eCLIP15.73■□□□□ 0.11
LSM2-209ENST00000470083 ZBTB48P10074 688 aaPredicted RBP15.73■□□□□ 0.11
LSM2-209ENST00000470083 PRKG1Q13976 671 aa15.73■□□□□ 0.11
LSM2-209ENST00000470083 CD99L2Q8TCZ2 262 aa15.73■□□□□ 0.11
LSM2-209ENST00000470083 ZNF333Q96JL9 665 aa15.73■□□□□ 0.11
LSM2-209ENST00000470083 ATP5J2-PTCD1G3V325 749 aa15.72■□□□□ 0.11
LSM2-209ENST00000470083 RTL5Q5HYW3 569 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms