RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 GTF2F1P35269 517 aaKnown RBP eCLIP16.15■□□□□ 0.184e-8■■■□□ 16.5
BRCA1-209ENST00000470026 CCDC129Q6ZRS4 1044 aa16.15■□□□□ 0.18
BRCA1-209ENST00000470026 SEC62Q99442 399 aaKnown RBP16.15■□□□□ 0.18
BRCA1-209ENST00000470026 DSCC1Q9BVC3 393 aa16.15■□□□□ 0.18
BRCA1-209ENST00000470026 KCNF1Q9H3M0 494 aa16.15■□□□□ 0.18
BRCA1-209ENST00000470026 ZSCAN16Q9H4T2 348 aaPredicted RBP16.15■□□□□ 0.18
BRCA1-209ENST00000470026 HELLSQ9NRZ9 838 aa16.15■□□□□ 0.18
BRCA1-209ENST00000470026 ATP5J2-PTCD1G3V325 749 aa16.14■□□□□ 0.17
BRCA1-209ENST00000470026 PTCD1O75127 700 aaKnown RBP16.14■□□□□ 0.17
BRCA1-209ENST00000470026 CHGBP05060 677 aa16.14■□□□□ 0.17
BRCA1-209ENST00000470026 PIP4K2AP48426 406 aaPredicted RBP16.14■□□□□ 0.17
BRCA1-209ENST00000470026 HMGN5P82970 282 aaKnown RBP16.14■□□□□ 0.17
BRCA1-209ENST00000470026 STK3Q13188 491 aa16.14■□□□□ 0.17
BRCA1-209ENST00000470026 LMBR1LQ6UX01 489 aa16.14■□□□□ 0.17
BRCA1-209ENST00000470026 STOX1Q6ZVD7 989 aa16.14■□□□□ 0.17
BRCA1-209ENST00000470026 MTERF4Q7Z6M4 381 aaKnown RBP16.14■□□□□ 0.17
BRCA1-209ENST00000470026 BRF1Q92994 677 aa16.14■□□□□ 0.17
BRCA1-209ENST00000470026 TNS3Q68CZ2 1445 aa16.14■□□□□ 0.17
BRCA1-209ENST00000470026 MPNDQ8N594 471 aa16.13■□□□□ 0.17
BRCA1-209ENST00000470026 DNAJC2Q99543 621 aaKnown RBP16.13■□□□□ 0.17
BRCA1-209ENST00000470026 TNMDQ9H2S6 317 aa16.13■□□□□ 0.17
BRCA1-209ENST00000470026 TFIP11Q9UBB9 837 aaKnown RBP16.13■□□□□ 0.17
BRCA1-209ENST00000470026 NDUFB9Q9Y6M9 179 aa16.13■□□□□ 0.17
BRCA1-209ENST00000470026 NBPF26B4DH59 902 aa16.13■□□□□ 0.17
BRCA1-209ENST00000470026 EXOSC10Q01780 885 aaKnown RBP16.13■□□□□ 0.17
BRCA1-209ENST00000470026 SCRN1Q12765 414 aa16.13■□□□□ 0.17
BRCA1-209ENST00000470026 NBPF14Q5TI25 921 aa16.13■□□□□ 0.17
BRCA1-209ENST00000470026 NBPF10Q6P3W6 841 aaKnown RBP16.13■□□□□ 0.17
BRCA1-209ENST00000470026 DDX46Q7L014 1031 aaKnown RBP16.13■□□□□ 0.17
BRCA1-209ENST00000470026 DHX32Q7L7V1 743 aaKnown RBP16.13■□□□□ 0.17
BRCA1-209ENST00000470026 NBPF15Q8N660 670 aa16.13■□□□□ 0.17
BRCA1-209ENST00000470026 PAPPAQ13219 1627 aa16.12■□□□□ 0.17
BRCA1-209ENST00000470026 ADD1P35611 737 aaKnown RBP16.12■□□□□ 0.17
BRCA1-209ENST00000470026 CABP4P57796 275 aa16.12■□□□□ 0.17
BRCA1-209ENST00000470026 RBM10P98175 930 aaKnown RBP16.12■□□□□ 0.17
BRCA1-209ENST00000470026 ZMYM1Q5SVZ6 1142 aa16.12■□□□□ 0.17
BRCA1-209ENST00000470026 NAA16Q6N069 864 aaPredicted RBP16.12■□□□□ 0.17
BRCA1-209ENST00000470026 TDRD7Q8NHU6 1098 aaKnown RBP16.12■□□□□ 0.17
BRCA1-209ENST00000470026 GOLGA6L6A8MZA4 724 aa16.12■□□□□ 0.17
BRCA1-209ENST00000470026 CSB-PGBD3P0DP91 1061 aa16.12■□□□□ 0.17
BRCA1-209ENST00000470026 NSUN7Q8NE18 718 aaKnown RBP16.12■□□□□ 0.17
BRCA1-209ENST00000470026 CBX8Q9HC52 389 aa16.12■□□□□ 0.17
BRCA1-209ENST00000470026 GOLGA6L4A6NEF3 574 aa16.11■□□□□ 0.17
BRCA1-209ENST00000470026 IL15P40933 162 aaPredicted RBP16.11■□□□□ 0.17
BRCA1-209ENST00000470026 CAMK4Q16566 473 aa16.11■□□□□ 0.17
BRCA1-209ENST00000470026 FBXL16Q8N461 479 aa16.11■□□□□ 0.17
BRCA1-209ENST00000470026 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.11■□□□□ 0.17
BRCA1-209ENST00000470026 ATG3Q9NT62 314 aa16.11■□□□□ 0.17
BRCA1-209ENST00000470026 PAG1Q9NWQ8 432 aa16.11■□□□□ 0.17
BRCA1-209ENST00000470026 CFAP45Q9UL16 551 aa16.11■□□□□ 0.17
BRCA1-209ENST00000470026 SALL1Q9NSC2 1324 aa16.11■□□□□ 0.17
BRCA1-209ENST00000470026 NR1I2O75469 434 aa16.1■□□□□ 0.17
BRCA1-209ENST00000470026 CTDNEP1O95476 244 aa16.1■□□□□ 0.17
BRCA1-209ENST00000470026 CAVIN2O95810 425 aa16.1■□□□□ 0.17
BRCA1-209ENST00000470026 FAM13BQ9NYF5 915 aa16.1■□□□□ 0.17
BRCA1-209ENST00000470026 KCPQ6ZWJ8 1503 aa16.1■□□□□ 0.17
BRCA1-209ENST00000470026 CIAO1O76071 339 aa16.1■□□□□ 0.17
BRCA1-209ENST00000470026 ANO6Q4KMQ2 910 aa16.1■□□□□ 0.17
BRCA1-209ENST00000470026 LUZP1Q86V48 1076 aa16.1■□□□□ 0.17
BRCA1-209ENST00000470026 C17orf53Q8N3J3 647 aaPredicted RBP16.1■□□□□ 0.17
BRCA1-209ENST00000470026 CWC25Q9NXE8 425 aaPredicted RBP16.1■□□□□ 0.17
BRCA1-209ENST00000470026 RCOR1Q9UKL0 485 aa16.1■□□□□ 0.17
BRCA1-209ENST00000470026 PYCARDQ9ULZ3 195 aa16.1■□□□□ 0.17
BRCA1-209ENST00000470026 STRCP1A6NGW2 1772 aa16.09■□□□□ 0.17
BRCA1-209ENST00000470026 ATF3P18847 181 aa16.09■□□□□ 0.17
BRCA1-209ENST00000470026 ATL3Q6DD88 541 aa16.09■□□□□ 0.17
BRCA1-209ENST00000470026 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.09■□□□□ 0.17
BRCA1-209ENST00000470026 PLA2G4DQ86XP0 818 aa16.09■□□□□ 0.17
BRCA1-209ENST00000470026 CKAP2LQ8IYA6 745 aa16.09■□□□□ 0.17
BRCA1-209ENST00000470026 CHMP3Q9Y3E7 222 aa16.09■□□□□ 0.17
BRCA1-209ENST00000470026 EYA2O00167 538 aa16.09■□□□□ 0.17
BRCA1-209ENST00000470026 HSP90B1P14625 803 aaKnown RBP16.09■□□□□ 0.17
BRCA1-209ENST00000470026 TRHP20396 242 aaPredicted RBP16.09■□□□□ 0.17
BRCA1-209ENST00000470026 PLCB2Q00722 1185 aa16.09■□□□□ 0.17
BRCA1-209ENST00000470026 CCDC191Q8NCU4 936 aa16.09■□□□□ 0.17
BRCA1-209ENST00000470026 DDX17Q92841 729 aaKnown RBP16.09■□□□□ 0.17
BRCA1-209ENST00000470026 SPATA31A3Q5VYP0 1347 aa16.09■□□□□ 0.17
BRCA1-209ENST00000470026 H3BQV1 296 aa16.08■□□□□ 0.16
BRCA1-209ENST00000470026 GOLIM4O00461 696 aa16.08■□□□□ 0.16
BRCA1-209ENST00000470026 EVCP57679 992 aa16.08■□□□□ 0.16
BRCA1-209ENST00000470026 CHRNA2Q15822 529 aa16.08■□□□□ 0.16
BRCA1-209ENST00000470026 DNTTIP2Q5QJE6 756 aaKnown RBP16.08■□□□□ 0.16
BRCA1-209ENST00000470026 IFFO2Q5TF58 517 aa16.08■□□□□ 0.16
BRCA1-209ENST00000470026 TTLL7Q6ZT98 887 aa16.08■□□□□ 0.16
BRCA1-209ENST00000470026 CABLES1Q8TDN4 633 aa16.08■□□□□ 0.16
BRCA1-209ENST00000470026 HSPD1P10809 573 aaKnown RBP16.07■□□□□ 0.16
BRCA1-209ENST00000470026 BICD2Q8TD16 824 aa16.07■□□□□ 0.16
BRCA1-209ENST00000470026 ZNF274Q96GC6 653 aaPredicted RBP16.07■□□□□ 0.16
BRCA1-209ENST00000470026 TNS2Q63HR2 1409 aa16.07■□□□□ 0.16
BRCA1-209ENST00000470026 ERVV-2B6SEH9 535 aa16.07■□□□□ 0.16
BRCA1-209ENST00000470026 TIMM10P62072 90 aa16.07■□□□□ 0.16
BRCA1-209ENST00000470026 NKX1-1Q15270 411 aaPredicted RBP16.07■□□□□ 0.16
BRCA1-209ENST00000470026 DDX11Q96FC9 970 aa16.07■□□□□ 0.16
BRCA1-209ENST00000470026 LRRC2Q9BYS8 371 aa16.07■□□□□ 0.16
BRCA1-209ENST00000470026 MAST3O60307 1309 aa16.07■□□□□ 0.16
BRCA1-209ENST00000470026 PTPDC1A2A3K4 754 aa16.06■□□□□ 0.16
BRCA1-209ENST00000470026 E7EWF7 191 aa16.06■□□□□ 0.16
BRCA1-209ENST00000470026 RNF113AO15541 343 aaKnown RBP16.06■□□□□ 0.16
BRCA1-209ENST00000470026 ZNF75DP51815 510 aa16.06■□□□□ 0.16
BRCA1-209ENST00000470026 SPC24Q8NBT2 197 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms