RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 CCDC85CA6NKD9 419 aa16.37■□□□□ 0.21
GAPVD1-214ENST00000469528 VIL1P09327 827 aaKnown RBP16.37■□□□□ 0.21
GAPVD1-214ENST00000469528 RBM26Q5T8P6 1007 aaKnown RBP16.37■□□□□ 0.21
GAPVD1-214ENST00000469528 SAMD7Q7Z3H4 446 aa16.37■□□□□ 0.21
GAPVD1-214ENST00000469528 ZNF428Q96B54 188 aa16.37■□□□□ 0.21
GAPVD1-214ENST00000469528 PDE8AO60658 829 aa16.36■□□□□ 0.21
GAPVD1-214ENST00000469528 ZNF853P0CG23 659 aa16.36■□□□□ 0.21
GAPVD1-214ENST00000469528 DOK7Q18PE1 504 aa16.36■□□□□ 0.21
GAPVD1-214ENST00000469528 TBC1D10BQ4KMP7 808 aaPredicted RBP16.36■□□□□ 0.21
GAPVD1-214ENST00000469528 CCDC30Q5VVM6 783 aa16.36■□□□□ 0.21
GAPVD1-214ENST00000469528 SULF1Q8IWU6 871 aa16.36■□□□□ 0.21
GAPVD1-214ENST00000469528 GGA1Q9UJY5 639 aa16.36■□□□□ 0.21
GAPVD1-214ENST00000469528 PCCAP05165 728 aaPredicted RBP16.35■□□□□ 0.21
GAPVD1-214ENST00000469528 RGMBQ6NW40 437 aa16.35■□□□□ 0.21
GAPVD1-214ENST00000469528 REM2Q8IYK8 340 aaPredicted RBP16.35■□□□□ 0.21
GAPVD1-214ENST00000469528 GBA2Q9HCG7 927 aaPredicted RBP16.35■□□□□ 0.21
GAPVD1-214ENST00000469528 CWC25Q9NXE8 425 aaPredicted RBP16.35■□□□□ 0.21
GAPVD1-214ENST00000469528 LAMB2P55268 1798 aa16.35■□□□□ 0.21
GAPVD1-214ENST00000469528 UFL1O94874 794 aa16.34■□□□□ 0.21
GAPVD1-214ENST00000469528 ANKRD18AQ8IVF6 992 aa16.34■□□□□ 0.21
GAPVD1-214ENST00000469528 AGBL3Q8NEM8 1001 aa16.34■□□□□ 0.21
GAPVD1-214ENST00000469528 MYD88Q99836 296 aa16.34■□□□□ 0.21
GAPVD1-214ENST00000469528 ELL2O00472 640 aaPredicted RBP16.33■□□□□ 0.2
GAPVD1-214ENST00000469528 APAF1O14727 1248 aa16.33■□□□□ 0.2
GAPVD1-214ENST00000469528 ZNF157P51786 506 aaPredicted RBP16.33■□□□□ 0.2
GAPVD1-214ENST00000469528 MLLT1Q03111 559 aaPredicted RBP16.33■□□□□ 0.2
GAPVD1-214ENST00000469528 KIF4BQ2VIQ3 1234 aa16.33■□□□□ 0.2
GAPVD1-214ENST00000469528 PODNQ7Z5L7 613 aa16.33■□□□□ 0.2
GAPVD1-214ENST00000469528 PHAXQ9H814 394 aaKnown RBP16.33■□□□□ 0.2
GAPVD1-214ENST00000469528 SHTN1A0MZ66 631 aa16.32■□□□□ 0.2
GAPVD1-214ENST00000469528 ATP2B4P23634 1241 aa16.32■□□□□ 0.2
GAPVD1-214ENST00000469528 NEXNQ0ZGT2 675 aa16.32■□□□□ 0.2
GAPVD1-214ENST00000469528 CDC5LQ99459 802 aaKnown RBP16.32■□□□□ 0.2
GAPVD1-214ENST00000469528 METTL22Q9BUU2 404 aaPredicted RBP16.32■□□□□ 0.2
GAPVD1-214ENST00000469528 PRKRIP1Q9H875 184 aaPredicted RBP16.32■□□□□ 0.2
GAPVD1-214ENST00000469528 KCNQ5Q9NR82 932 aa16.32■□□□□ 0.2
GAPVD1-214ENST00000469528 SAGE1Q9NXZ1 904 aa16.32■□□□□ 0.2
GAPVD1-214ENST00000469528 TSKSQ9UJT2 592 aa16.32■□□□□ 0.2
GAPVD1-214ENST00000469528 THSD7BQ9C0I4 1608 aa16.31■□□□□ 0.2
GAPVD1-214ENST00000469528 XDHP47989 1333 aa16.31■□□□□ 0.2
GAPVD1-214ENST00000469528 RGS19P49795 217 aa16.31■□□□□ 0.2
GAPVD1-214ENST00000469528 MMP14P50281 582 aa16.31■□□□□ 0.2
GAPVD1-214ENST00000469528 SEC31BQ9NQW1 1179 aa16.31■□□□□ 0.2
GAPVD1-214ENST00000469528 TAF1P21675 1872 aa16.31■□□□□ 0.2
GAPVD1-214ENST00000469528 FKBP1BP68106 108 aa16.3■□□□□ 0.2
GAPVD1-214ENST00000469528 RSBN1LQ6PCB5 846 aaPredicted RBP16.3■□□□□ 0.2
GAPVD1-214ENST00000469528 STK31Q9BXU1 1019 aa16.3■□□□□ 0.2
GAPVD1-214ENST00000469528 MCOLN1Q9GZU1 580 aa16.3■□□□□ 0.2
GAPVD1-214ENST00000469528 RTL9Q8NET4 1388 aa16.29■□□□□ 0.2
GAPVD1-214ENST00000469528 LRRC37AA6NMS7 1700 aa16.29■□□□□ 0.2
GAPVD1-214ENST00000469528 USP17L3A6NCW0 530 aa16.29■□□□□ 0.2
GAPVD1-214ENST00000469528 USP17L4A6NCW7 530 aa16.29■□□□□ 0.2
GAPVD1-214ENST00000469528 USP17L8P0C7I0 530 aa16.29■□□□□ 0.2
GAPVD1-214ENST00000469528 ZNF280AP59817 542 aaPredicted RBP16.29■□□□□ 0.2
GAPVD1-214ENST00000469528 DGKZQ13574 1117 aa16.29■□□□□ 0.2
GAPVD1-214ENST00000469528 SCARF1Q14162 830 aa16.29■□□□□ 0.2
GAPVD1-214ENST00000469528 KSR2Q6VAB6 950 aa16.29■□□□□ 0.2
GAPVD1-214ENST00000469528 USP17L1Q7RTZ2 530 aa16.29■□□□□ 0.2
GAPVD1-214ENST00000469528 OGFOD1Q8N543 542 aa16.29■□□□□ 0.2
GAPVD1-214ENST00000469528 DUOX1Q9NRD9 1551 aa16.29■□□□□ 0.2
GAPVD1-214ENST00000469528 DDX60Q8IY21 1712 aaKnown RBP16.28■□□□□ 0.2
GAPVD1-214ENST00000469528 EGFRP00533 1210 aa16.28■□□□□ 0.2
GAPVD1-214ENST00000469528 KIF23Q02241 960 aaPredicted RBP16.28■□□□□ 0.2
GAPVD1-214ENST00000469528 FAM161AQ3B820 660 aa16.28■□□□□ 0.2
GAPVD1-214ENST00000469528 C8orf58Q8NAV2 365 aa16.28■□□□□ 0.2
GAPVD1-214ENST00000469528 BSDC1Q9NW68 430 aaPredicted RBP16.28■□□□□ 0.2
GAPVD1-214ENST00000469528 GGA3Q9NZ52 723 aa16.28■□□□□ 0.2
GAPVD1-214ENST00000469528 MAP3K2Q9Y2U5 619 aa16.28■□□□□ 0.2
GAPVD1-214ENST00000469528 FAM155AB1AL88 458 aaPredicted RBP16.27■□□□□ 0.2
GAPVD1-214ENST00000469528 ADM5C9JUS6 153 aa16.27■□□□□ 0.2
GAPVD1-214ENST00000469528 MYOZ2Q9NPC6 264 aa16.27■□□□□ 0.2
GAPVD1-214ENST00000469528 PITPNM2Q9BZ72 1349 aa16.26■□□□□ 0.19
GAPVD1-214ENST00000469528 PI4KAP2A4QPH2 592 aa16.26■□□□□ 0.19
GAPVD1-214ENST00000469528 ANGEL2Q5VTE6 544 aaKnown RBP16.26■□□□□ 0.19
GAPVD1-214ENST00000469528 PI4KAP1Q8N8J0 262 aa16.26■□□□□ 0.19
GAPVD1-214ENST00000469528 CDCA5Q96FF9 252 aa16.26■□□□□ 0.19
GAPVD1-214ENST00000469528 CCDC85AQ96PX6 553 aaPredicted RBP16.26■□□□□ 0.19
GAPVD1-214ENST00000469528 POLR2AP24928 1970 aaKnown RBP16.26■□□□□ 0.19
GAPVD1-214ENST00000469528 TRPA1O75762 1119 aa16.25■□□□□ 0.19
GAPVD1-214ENST00000469528 SLC10A3P09131 477 aa16.25■□□□□ 0.19
GAPVD1-214ENST00000469528 NF2P35240 595 aa16.25■□□□□ 0.19
GAPVD1-214ENST00000469528 IGHMBP2P38935 993 aaKnown RBP16.25■□□□□ 0.19
GAPVD1-214ENST00000469528 CTSWP56202 376 aa16.25■□□□□ 0.19
GAPVD1-214ENST00000469528 DLK2Q6UY11 383 aa16.25■□□□□ 0.19
GAPVD1-214ENST00000469528 TTLL11Q8NHH1 800 aa16.25■□□□□ 0.19
GAPVD1-214ENST00000469528 JARID2Q92833 1246 aaPredicted RBP16.25■□□□□ 0.19
GAPVD1-214ENST00000469528 ZIC5Q96T25 663 aa16.25■□□□□ 0.19
GAPVD1-214ENST00000469528 RNF186Q9NXI6 227 aa16.25■□□□□ 0.19
GAPVD1-214ENST00000469528 MINPP1Q9UNW1 487 aa16.25■□□□□ 0.19
GAPVD1-214ENST00000469528 LEMD3Q9Y2U8 911 aa16.25■□□□□ 0.19
GAPVD1-214ENST00000469528 MYO3BQ8WXR4 1341 aa16.24■□□□□ 0.19
GAPVD1-214ENST00000469528 CSRNP1Q96S65 589 aa16.24■□□□□ 0.19
GAPVD1-214ENST00000469528 GMLQ99445 158 aa16.24■□□□□ 0.19
GAPVD1-214ENST00000469528 ANKRD2Q9GZV1 360 aa16.24■□□□□ 0.19
GAPVD1-214ENST00000469528 COA1Q9GZY4 146 aa16.24■□□□□ 0.19
GAPVD1-214ENST00000469528 ZNF609O15014 1411 aa16.24■□□□□ 0.19
GAPVD1-214ENST00000469528 CCT4P50991 539 aaKnown RBP16.23■□□□□ 0.19
GAPVD1-214ENST00000469528 STRIP1Q5VSL9 837 aa16.23■□□□□ 0.19
GAPVD1-214ENST00000469528 CASP8AP2Q9UKL3 1982 aa16.23■□□□□ 0.19
GAPVD1-214ENST00000469528 H7C1W4 665 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms