RNA–Protein interactions for RNA: ENST00000469389.5

SYP-204, Transcript of synaptophysin, humanhuman

TSL 4

Gene SYP, Length 581 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-204ENST00000469389 PNMA6EA0A0J9YXQ4 647 aa19.59■□□□□ 0.73
SYP-204ENST00000469389 ARHGAP27Q6ZUM4 889 aa19.59■□□□□ 0.73
SYP-204ENST00000469389 SSH3Q8TE77 659 aa19.59■□□□□ 0.73
SYP-204ENST00000469389 COPRSQ9NQ92 184 aa19.59■□□□□ 0.73
SYP-204ENST00000469389 NSFL1CQ9UNZ2 370 aaKnown RBP19.59■□□□□ 0.73
SYP-204ENST00000469389 EYA2O00167 538 aa19.58■□□□□ 0.72
SYP-204ENST00000469389 SURF6O75683 361 aaKnown RBP19.58■□□□□ 0.72
SYP-204ENST00000469389 CIAO1O76071 339 aa19.58■□□□□ 0.72
SYP-204ENST00000469389 IL15P40933 162 aaPredicted RBP19.58■□□□□ 0.72
SYP-204ENST00000469389 PTPN12Q05209 780 aaKnown RBP19.58■□□□□ 0.72
SYP-204ENST00000469389 METTL24Q5JXM2 366 aa19.58■□□□□ 0.72
SYP-204ENST00000469389 ZBTB47Q9UFB7 747 aaPredicted RBP19.58■□□□□ 0.72
SYP-204ENST00000469389 XDHP47989 1333 aa19.57■□□□□ 0.72
SYP-204ENST00000469389 POLA2Q14181 598 aa19.57■□□□□ 0.72
SYP-204ENST00000469389 ERC1Q8IUD2 1116 aa19.57■□□□□ 0.72
SYP-204ENST00000469389 KLHDC4Q8TBB5 520 aa19.57■□□□□ 0.72
SYP-204ENST00000469389 RWDD1Q9H446 243 aaPredicted RBP19.57■□□□□ 0.72
SYP-204ENST00000469389 CEP126Q9P2H0 1117 aa19.57■□□□□ 0.72
SYP-204ENST00000469389 GGA1Q9UJY5 639 aa19.57■□□□□ 0.72
SYP-204ENST00000469389 MINPP1Q9UNW1 487 aa19.57■□□□□ 0.72
SYP-204ENST00000469389 C6orf229H3BNL8 230 aa19.56■□□□□ 0.72
SYP-204ENST00000469389 RFX5P48382 616 aaPredicted RBP19.56■□□□□ 0.72
SYP-204ENST00000469389 CHRNDQ07001 517 aa19.56■□□□□ 0.72
SYP-204ENST00000469389 C7orf43Q8WVR3 580 aa19.56■□□□□ 0.72
SYP-204ENST00000469389 EYA3Q99504 573 aa19.56■□□□□ 0.72
SYP-204ENST00000469389 TAOK3Q9H2K8 898 aa19.56■□□□□ 0.72
SYP-204ENST00000469389 PA2G4Q9UQ80 394 aaKnown RBP19.56■□□□□ 0.72
SYP-204ENST00000469389 G3V3G9 751 aa19.55■□□□□ 0.72
SYP-204ENST00000469389 ATP2B4P23634 1241 aa19.55■□□□□ 0.72
SYP-204ENST00000469389 DCAF8Q5TAQ9 597 aa19.55■□□□□ 0.72
SYP-204ENST00000469389 UFL1O94874 794 aa19.54■□□□□ 0.72
SYP-204ENST00000469389 YBX3P16989 372 aaKnown RBP eCLIP19.54■□□□□ 0.72
SYP-204ENST00000469389 GPSM2P81274 684 aa19.54■□□□□ 0.72
SYP-204ENST00000469389 FKBP4Q02790 459 aaKnown RBP eCLIP19.54■□□□□ 0.72
SYP-204ENST00000469389 LRRC24Q50LG9 513 aa19.54■□□□□ 0.72
SYP-204ENST00000469389 PUS3Q9BZE2 481 aaKnown RBP19.54■□□□□ 0.72
SYP-204ENST00000469389 LEMD3Q9Y2U8 911 aa19.54■□□□□ 0.72
SYP-204ENST00000469389 PSMD1Q99460 953 aa19.53■□□□□ 0.72
SYP-204ENST00000469389 PODXL2Q9NZ53 605 aa19.53■□□□□ 0.72
SYP-204ENST00000469389 AKAP2Q9Y2D5 859 aa19.53■□□□□ 0.72
SYP-204ENST00000469389 RIPOR2Q9Y4F9 1068 aa19.53■□□□□ 0.72
SYP-204ENST00000469389 PCDHB15Q9Y5E8 787 aa19.53■□□□□ 0.72
SYP-204ENST00000469389 LRRC37AA6NMS7 1700 aa19.52■□□□□ 0.72
SYP-204ENST00000469389 RAB11FIP3O75154 756 aa19.52■□□□□ 0.72
SYP-204ENST00000469389 OLFM4Q6UX06 510 aa19.52■□□□□ 0.72
SYP-204ENST00000469389 NOP58Q9Y2X3 529 aaKnown RBP19.52■□□□□ 0.72
SYP-204ENST00000469389 SRCAPQ6ZRS2 3230 aa19.51■□□□□ 0.71
SYP-204ENST00000469389 PDE8BO95263 885 aa19.51■□□□□ 0.71
SYP-204ENST00000469389 PUM3Q15397 648 aaKnown RBP19.51■□□□□ 0.71
SYP-204ENST00000469389 ERICH6BQ5W0A0 696 aa19.51■□□□□ 0.71
SYP-204ENST00000469389 HELBQ8NG08 1087 aaPredicted RBP19.51■□□□□ 0.71
SYP-204ENST00000469389 ZC3H12CQ9C0D7 883 aaKnown RBP19.51■□□□□ 0.71
SYP-204ENST00000469389 VPS33BQ9H267 617 aa19.51■□□□□ 0.71
SYP-204ENST00000469389 EXOC6BQ9Y2D4 811 aa19.51■□□□□ 0.71
SYP-204ENST00000469389 ZNF804BA4D1E1 1349 aa19.51■□□□□ 0.71
SYP-204ENST00000469389 LTBP3Q9NS15 1303 aa19.51■□□□□ 0.71
SYP-204ENST00000469389 APBB1O00213 710 aa19.5■□□□□ 0.71
SYP-204ENST00000469389 TAF5LO75529 589 aa19.5■□□□□ 0.71
SYP-204ENST00000469389 IFIT1P09914 478 aaKnown RBP19.5■□□□□ 0.71
SYP-204ENST00000469389 SLC5A1P13866 664 aa19.5■□□□□ 0.71
SYP-204ENST00000469389 HDAC1Q13547 482 aaPredicted RBP19.5■□□□□ 0.71
SYP-204ENST00000469389 WASHC4Q2M389 1173 aa19.5■□□□□ 0.71
SYP-204ENST00000469389 SIRT2Q8IXJ6 389 aa19.5■□□□□ 0.71
SYP-204ENST00000469389 TBC1D16Q8TBP0 767 aa19.5■□□□□ 0.71
SYP-204ENST00000469389 PPIP5K2O43314 1243 aa19.49■□□□□ 0.71
SYP-204ENST00000469389 UBE4AQ14139 1066 aa19.49■□□□□ 0.71
SYP-204ENST00000469389 ATG9AQ7Z3C6 839 aa19.49■□□□□ 0.71
SYP-204ENST00000469389 VPS37DQ86XT2 251 aa19.49■□□□□ 0.71
SYP-204ENST00000469389 LARGE2Q8N3Y3 721 aa19.49■□□□□ 0.71
SYP-204ENST00000469389 JDP2Q8WYK2 163 aa19.49■□□□□ 0.71
SYP-204ENST00000469389 GCC1Q96CN9 775 aa19.49■□□□□ 0.71
SYP-204ENST00000469389 KIF1BPQ96EK5 621 aa19.49■□□□□ 0.71
SYP-204ENST00000469389 FER1L6Q2WGJ9 1857 aa19.49■□□□□ 0.71
SYP-204ENST00000469389 LMNB1P20700 586 aa19.48■□□□□ 0.71
SYP-204ENST00000469389 ATP2B3Q16720 1220 aa19.48■□□□□ 0.71
SYP-204ENST00000469389 CAVIN4Q5BKX8 364 aa19.48■□□□□ 0.71
SYP-204ENST00000469389 RTFDC1Q9BY42 306 aaPredicted RBP19.48■□□□□ 0.71
SYP-204ENST00000469389 ZNF277Q9NRM2 450 aaPredicted RBP19.48■□□□□ 0.71
SYP-204ENST00000469389 COL4A1P02462 1669 aa19.48■□□□□ 0.71
SYP-204ENST00000469389 IARSP41252 1262 aaKnown RBP19.47■□□□□ 0.71
SYP-204ENST00000469389 RASSF7Q02833 373 aa19.47■□□□□ 0.71
SYP-204ENST00000469389 TFCP2Q12800 502 aa19.47■□□□□ 0.71
SYP-204ENST00000469389 GORABQ5T7V8 394 aa19.47■□□□□ 0.71
SYP-204ENST00000469389 CLASRPQ8N2M8 674 aaKnown RBP19.47■□□□□ 0.71
SYP-204ENST00000469389 LPIN2Q92539 896 aa19.47■□□□□ 0.71
SYP-204ENST00000469389 LRRCC1Q9C099 1032 aa19.47■□□□□ 0.71
SYP-204ENST00000469389 BCL11AQ9H165 835 aa19.47■□□□□ 0.71
SYP-204ENST00000469389 DCTPP1Q9H773 170 aa19.47■□□□□ 0.71
SYP-204ENST00000469389 POLLQ9UGP5 575 aa19.47■□□□□ 0.71
SYP-204ENST00000469389 NFKBIEO00221 500 aa19.46■□□□□ 0.71
SYP-204ENST00000469389 RIMBP2O15034 1052 aa19.46■□□□□ 0.71
SYP-204ENST00000469389 ZNF804AQ7Z570 1209 aa19.46■□□□□ 0.71
SYP-204ENST00000469389 NIM1KQ8IY84 436 aa19.46■□□□□ 0.71
SYP-204ENST00000469389 NEUROD6Q96NK8 337 aa19.46■□□□□ 0.71
SYP-204ENST00000469389 RHPN1Q8TCX5 695 aa19.45■□□□□ 0.7
SYP-204ENST00000469389 CCDC136Q96JN2 1154 aa19.45■□□□□ 0.7
SYP-204ENST00000469389 RNF181Q9P0P0 153 aa19.45■□□□□ 0.7
SYP-204ENST00000469389 MED23Q9ULK4 1368 aa19.44■□□□□ 0.7
SYP-204ENST00000469389 FRAT2O75474 233 aaPredicted RBP19.44■□□□□ 0.7
SYP-204ENST00000469389 KIAA2012Q0VF49 1180 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms