RNA–Protein interactions for RNA: ENST00000469114.1

UPK3B-204, Transcript of uroplakin 3B, humanhuman

TSL 3

Gene UPK3B, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-204ENST00000469114 CHL1O00533 1208 aa25.45■■□□□ 1.66
UPK3B-204ENST00000469114 TRPA1O75762 1119 aa25.45■■□□□ 1.66
UPK3B-204ENST00000469114 HDGFL1Q5TGJ6 251 aa25.45■■□□□ 1.66
UPK3B-204ENST00000469114 KCNQ5Q9NR82 932 aa25.45■■□□□ 1.66
UPK3B-204ENST00000469114 RNF186Q9NXI6 227 aa25.45■■□□□ 1.66
UPK3B-204ENST00000469114 GGA3Q9NZ52 723 aa25.45■■□□□ 1.66
UPK3B-204ENST00000469114 ATP5J2-PTCD1G3V325 749 aa25.44■■□□□ 1.66
UPK3B-204ENST00000469114 TNRC18O15417 2968 aaPredicted RBP25.44■■□□□ 1.66
UPK3B-204ENST00000469114 SLC10A3P09131 477 aa25.44■■□□□ 1.66
UPK3B-204ENST00000469114 TBC1D16Q8TBP0 767 aa25.44■■□□□ 1.66
UPK3B-204ENST00000469114 ZC3H12CQ9C0D7 883 aaKnown RBP25.44■■□□□ 1.66
UPK3B-204ENST00000469114 COL4A1P02462 1669 aa25.43■■□□□ 1.66
UPK3B-204ENST00000469114 G3V3G9 751 aa25.43■■□□□ 1.66
UPK3B-204ENST00000469114 RPS8P62241 208 aaKnown RBP25.43■■□□□ 1.66
UPK3B-204ENST00000469114 DCAF8Q5TAQ9 597 aa25.43■■□□□ 1.66
UPK3B-204ENST00000469114 DBF4Q9UBU7 674 aaPredicted RBP25.43■■□□□ 1.66
UPK3B-204ENST00000469114 LAS1LQ9Y4W2 734 aaKnown RBP25.43■■□□□ 1.66
UPK3B-204ENST00000469114 SCN9AQ15858 1988 aa25.43■■□□□ 1.66
UPK3B-204ENST00000469114 IRS4O14654 1257 aaPredicted RBP25.42■■□□□ 1.66
UPK3B-204ENST00000469114 VIL1P09327 827 aaKnown RBP25.42■■□□□ 1.66
UPK3B-204ENST00000469114 HOXB7P09629 217 aa25.42■■□□□ 1.66
UPK3B-204ENST00000469114 RTL5Q5HYW3 569 aaPredicted RBP25.42■■□□□ 1.66
UPK3B-204ENST00000469114 SOX10P56693 466 aa25.41■■□□□ 1.66
UPK3B-204ENST00000469114 NEUROD2Q15784 382 aa25.41■■□□□ 1.66
UPK3B-204ENST00000469114 REM2Q8IYK8 340 aaPredicted RBP25.41■■□□□ 1.66
UPK3B-204ENST00000469114 CDCA5Q96FF9 252 aa25.41■■□□□ 1.66
UPK3B-204ENST00000469114 TRIM28Q13263 835 aaKnown RBP25.4■■□□□ 1.66
UPK3B-204ENST00000469114 CSRNP1Q96S65 589 aa25.4■■□□□ 1.66
UPK3B-204ENST00000469114 HYPKQ9NX55 129 aa25.4■■□□□ 1.66
UPK3B-204ENST00000469114 PODXL2Q9NZ53 605 aa25.4■■□□□ 1.66
UPK3B-204ENST00000469114 ZNF609O15014 1411 aa25.38■■□□□ 1.65
UPK3B-204ENST00000469114 UFL1O94874 794 aa25.38■■□□□ 1.65
UPK3B-204ENST00000469114 HSP90B1P14625 803 aaKnown RBP25.38■■□□□ 1.65
UPK3B-204ENST00000469114 CTU1Q7Z7A3 348 aaKnown RBP25.38■■□□□ 1.65
UPK3B-204ENST00000469114 ANKIB1Q9P2G1 1089 aa25.38■■□□□ 1.65
UPK3B-204ENST00000469114 GGA1Q9UJY5 639 aa25.38■■□□□ 1.65
UPK3B-204ENST00000469114 ASTN2O75129 1339 aaPredicted RBP25.37■■□□□ 1.65
UPK3B-204ENST00000469114 FKBP1BP68106 108 aa25.37■■□□□ 1.65
UPK3B-204ENST00000469114 RALBP1Q15311 655 aa25.37■■□□□ 1.65
UPK3B-204ENST00000469114 RASAL3Q86YV0 1011 aa25.37■■□□□ 1.65
UPK3B-204ENST00000469114 AGBL3Q8NEM8 1001 aa25.37■■□□□ 1.65
UPK3B-204ENST00000469114 PAPPA2Q9BXP8 1791 aa25.36■■□□□ 1.65
UPK3B-204ENST00000469114 PSME4Q14997 1843 aa25.36■■□□□ 1.65
UPK3B-204ENST00000469114 ZNF280AP59817 542 aaPredicted RBP25.36■■□□□ 1.65
UPK3B-204ENST00000469114 ANGEL2Q5VTE6 544 aaKnown RBP25.36■■□□□ 1.65
UPK3B-204ENST00000469114 RSBN1LQ6PCB5 846 aaPredicted RBP25.36■■□□□ 1.65
UPK3B-204ENST00000469114 SCARF1Q14162 830 aa25.35■■□□□ 1.65
UPK3B-204ENST00000469114 CCDC146Q8IYE0 955 aa25.35■■□□□ 1.65
UPK3B-204ENST00000469114 ZBTB38Q8NAP3 1195 aaPredicted RBP25.35■■□□□ 1.65
UPK3B-204ENST00000469114 SEC31BQ9NQW1 1179 aa25.35■■□□□ 1.65
UPK3B-204ENST00000469114 TRIM35Q9UPQ4 493 aa25.35■■□□□ 1.65
UPK3B-204ENST00000469114 GOLGA2Q08379 1002 aa25.33■■□□□ 1.65
UPK3B-204ENST00000469114 CCDC152Q4G0S7 254 aa25.33■■□□□ 1.65
UPK3B-204ENST00000469114 RIC3Q7Z5B4 369 aa25.33■■□□□ 1.65
UPK3B-204ENST00000469114 PITPNM2Q9BZ72 1349 aa25.33■■□□□ 1.64
UPK3B-204ENST00000469114 DUSP27Q5VZP5 1158 aa25.32■■□□□ 1.64
UPK3B-204ENST00000469114 RUNDC1Q96C34 613 aa25.32■■□□□ 1.64
UPK3B-204ENST00000469114 USP17L8P0C7I0 530 aa25.31■■□□□ 1.64
UPK3B-204ENST00000469114 MYOZ2Q9NPC6 264 aa25.31■■□□□ 1.64
UPK3B-204ENST00000469114 DDX10Q13206 875 aaKnown RBP25.3■■□□□ 1.64
UPK3B-204ENST00000469114 GMLQ99445 158 aa25.3■■□□□ 1.64
UPK3B-204ENST00000469114 XDHP47989 1333 aa25.3■■□□□ 1.64
UPK3B-204ENST00000469114 PKN2Q16513 984 aaKnown RBP25.29■■□□□ 1.64
UPK3B-204ENST00000469114 PRPF38BQ5VTL8 546 aaKnown RBP25.29■■□□□ 1.64
UPK3B-204ENST00000469114 HDAC9Q9UKV0 1011 aa25.29■■□□□ 1.64
UPK3B-204ENST00000469114 HPS5Q9UPZ3 1129 aa25.29■■□□□ 1.64
UPK3B-204ENST00000469114 USP17L3A6NCW0 530 aa25.28■■□□□ 1.64
UPK3B-204ENST00000469114 USP17L4A6NCW7 530 aa25.28■■□□□ 1.64
UPK3B-204ENST00000469114 PDE8AO60658 829 aa25.28■■□□□ 1.64
UPK3B-204ENST00000469114 PCCAP05165 728 aaPredicted RBP25.28■■□□□ 1.64
UPK3B-204ENST00000469114 USP17L1Q7RTZ2 530 aa25.28■■□□□ 1.64
UPK3B-204ENST00000469114 PODNQ7Z5L7 613 aa25.28■■□□□ 1.64
UPK3B-204ENST00000469114 CCDC191Q8NCU4 936 aa25.28■■□□□ 1.64
UPK3B-204ENST00000469114 ATP2B4P23634 1241 aa25.27■■□□□ 1.64
UPK3B-204ENST00000469114 WDR43Q15061 677 aaKnown RBP eCLIP25.27■■□□□ 1.64
UPK3B-204ENST00000469114 ANKRD18AQ8IVF6 992 aa25.27■■□□□ 1.64
UPK3B-204ENST00000469114 MYD88Q99836 296 aa25.27■■□□□ 1.64
UPK3B-204ENST00000469114 MYBBP1AQ9BQG0 1328 aaKnown RBP25.26■■□□□ 1.63
UPK3B-204ENST00000469114 MOB2Q70IA6 237 aa25.25■■□□□ 1.63
UPK3B-204ENST00000469114 CCDC85AQ96PX6 553 aaPredicted RBP25.25■■□□□ 1.63
UPK3B-204ENST00000469114 PHAXQ9H814 394 aaKnown RBP25.25■■□□□ 1.63
UPK3B-204ENST00000469114 MBIPQ9NS73 344 aa25.25■■□□□ 1.63
UPK3B-204ENST00000469114 CWC25Q9NXE8 425 aaPredicted RBP25.25■■□□□ 1.63
UPK3B-204ENST00000469114 UBE2Q2LH0YL09 131 aa25.24■■□□□ 1.63
UPK3B-204ENST00000469114 ZNF296Q8WUU4 475 aaPredicted RBP25.24■■□□□ 1.63
UPK3B-204ENST00000469114 TBC1D8O95759 1140 aa25.23■■□□□ 1.63
UPK3B-204ENST00000469114 TTLL12Q14166 644 aaPredicted RBP25.23■■□□□ 1.63
UPK3B-204ENST00000469114 NF2P35240 595 aa25.22■■□□□ 1.63
UPK3B-204ENST00000469114 CDC5LQ99459 802 aaKnown RBP25.22■■□□□ 1.63
UPK3B-204ENST00000469114 SCAF8Q9UPN6 1271 aaKnown RBP25.22■■□□□ 1.63
UPK3B-204ENST00000469114 MED23Q9ULK4 1368 aa25.21■■□□□ 1.63
UPK3B-204ENST00000469114 NBPF9Q3BBW0 867 aa25.21■■□□□ 1.63
UPK3B-204ENST00000469114 NOM1Q5C9Z4 860 aaKnown RBP25.21■■□□□ 1.63
UPK3B-204ENST00000469114 PRAMEF18Q5VWM3 479 aa25.21■■□□□ 1.63
UPK3B-204ENST00000469114 OGFOD1Q8N543 542 aa25.21■■□□□ 1.63
UPK3B-204ENST00000469114 JARID2Q92833 1246 aaPredicted RBP25.21■■□□□ 1.63
UPK3B-204ENST00000469114 DDX58O95786 925 aaKnown RBP25.2■■□□□ 1.62
UPK3B-204ENST00000469114 TM4SF4P48230 202 aa25.2■■□□□ 1.62
UPK3B-204ENST00000469114 METTL22Q9BUU2 404 aaPredicted RBP25.2■■□□□ 1.62
UPK3B-204ENST00000469114 MYO3BQ8WXR4 1341 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms