RNA–Protein interactions for RNA: ENST00000468654.1

SHANK1-206, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 668 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-206ENST00000468654 A0A1B0GUL6 1792 aa27.06■■□□□ 1.92
SHANK1-206ENST00000468654 NEXNQ0ZGT2 675 aa27.05■■□□□ 1.92
SHANK1-206ENST00000468654 G2E3Q7L622 706 aa27.05■■□□□ 1.92
SHANK1-206ENST00000468654 WDR63Q8IWG1 891 aa27.05■■□□□ 1.92
SHANK1-206ENST00000468654 TBC1D16Q8TBP0 767 aa27.05■■□□□ 1.92
SHANK1-206ENST00000468654 EYA3Q99504 573 aa27.05■■□□□ 1.92
SHANK1-206ENST00000468654 BCL2L13Q9BXK5 485 aa27.05■■□□□ 1.92
SHANK1-206ENST00000468654 SLC4A2P04920 1241 aa27.04■■□□□ 1.92
SHANK1-206ENST00000468654 DBNDD1Q9H9R9 158 aa27.04■■□□□ 1.92
SHANK1-206ENST00000468654 RIMBP2O15034 1052 aa27.03■■□□□ 1.92
SHANK1-206ENST00000468654 HIRAP54198 1017 aaPredicted RBP27.03■■□□□ 1.92
SHANK1-206ENST00000468654 CTSWP56202 376 aa27.03■■□□□ 1.92
SHANK1-206ENST00000468654 CAPNS2Q96L46 248 aa27.03■■□□□ 1.92
SHANK1-206ENST00000468654 CCDC85AQ96PX6 553 aaPredicted RBP27.03■■□□□ 1.92
SHANK1-206ENST00000468654 GLIS2Q9BZE0 524 aaPredicted RBP27.03■■□□□ 1.92
SHANK1-206ENST00000468654 TLL2Q9Y6L7 1015 aa27.03■■□□□ 1.92
SHANK1-206ENST00000468654 NEURL1BA8MQ27 555 aa27.02■■□□□ 1.92
SHANK1-206ENST00000468654 HSPA8P11142 646 aaKnown RBP27.02■■□□□ 1.92
SHANK1-206ENST00000468654 CWF19L2Q2TBE0 894 aaKnown RBP27.02■■□□□ 1.92
SHANK1-206ENST00000468654 CYP4F22Q6NT55 531 aa27.02■■□□□ 1.92
SHANK1-206ENST00000468654 GPR101Q96P66 508 aaPredicted RBP27.02■■□□□ 1.92
SHANK1-206ENST00000468654 RTL9Q8NET4 1388 aa27.01■■□□□ 1.91
SHANK1-206ENST00000468654 CASP8AP2Q9UKL3 1982 aa27.01■■□□□ 1.91
SHANK1-206ENST00000468654 PSMD14O00487 310 aa27.01■■□□□ 1.91
SHANK1-206ENST00000468654 ECE2O60344 883 aa27.01■■□□□ 1.91
SHANK1-206ENST00000468654 LBX1P52954 281 aa27.01■■□□□ 1.91
SHANK1-206ENST00000468654 FLIIQ13045 1269 aa27.01■■□□□ 1.91
SHANK1-206ENST00000468654 PAXIP1Q6ZW49 1069 aaPredicted RBP27.01■■□□□ 1.91
SHANK1-206ENST00000468654 PGAP2Q9UHJ9 254 aa27.01■■□□□ 1.91
SHANK1-206ENST00000468654 SALL2Q9Y467 1007 aaPredicted RBP27.01■■□□□ 1.91
SHANK1-206ENST00000468654 UFL1O94874 794 aa27■■□□□ 1.91
SHANK1-206ENST00000468654 ANKRD18AQ8IVF6 992 aa27■■□□□ 1.91
SHANK1-206ENST00000468654 MICALL2Q8IY33 904 aa27■■□□□ 1.91
SHANK1-206ENST00000468654 DPF2Q92785 391 aa27■■□□□ 1.91
SHANK1-206ENST00000468654 ANKIB1Q9P2G1 1089 aa27■■□□□ 1.91
SHANK1-206ENST00000468654 CNOT7Q9UIV1 285 aaKnown RBP27■■□□□ 1.91
SHANK1-206ENST00000468654 GGA1Q9UJY5 639 aa27■■□□□ 1.91
SHANK1-206ENST00000468654 ZBTB12Q9Y330 459 aaPredicted RBP27■■□□□ 1.91
SHANK1-206ENST00000468654 ZC3H15Q8WU90 426 aaKnown RBP26.99■■□□□ 1.91
SHANK1-206ENST00000468654 CELF2O95319 508 aaKnown RBP26.98■■□□□ 1.91
SHANK1-206ENST00000468654 MAP2K1Q02750 393 aaPredicted RBP26.98■■□□□ 1.91
SHANK1-206ENST00000468654 GRM1Q13255 1194 aa26.98■■□□□ 1.91
SHANK1-206ENST00000468654 DOK7Q18PE1 504 aa26.98■■□□□ 1.91
SHANK1-206ENST00000468654 TTLL11Q8NHH1 800 aa26.98■■□□□ 1.91
SHANK1-206ENST00000468654 CDC5LQ99459 802 aaKnown RBP26.98■■□□□ 1.91
SHANK1-206ENST00000468654 XDHP47989 1333 aa26.97■■□□□ 1.91
SHANK1-206ENST00000468654 AKAP11Q9UKA4 1901 aa26.97■■□□□ 1.91
SHANK1-206ENST00000468654 VAMP4O75379 141 aa26.97■■□□□ 1.91
SHANK1-206ENST00000468654 RPS12P25398 132 aaKnown RBP26.97■■□□□ 1.91
SHANK1-206ENST00000468654 ECE1P42892 770 aa26.97■■□□□ 1.91
SHANK1-206ENST00000468654 EXOSC9Q06265 439 aaKnown RBP26.97■■□□□ 1.91
SHANK1-206ENST00000468654 ZC3H12CQ9C0D7 883 aaKnown RBP26.97■■□□□ 1.91
SHANK1-206ENST00000468654 H7C1D1 291 aa26.96■■□□□ 1.91
SHANK1-206ENST00000468654 H7C1W4 665 aa26.96■■□□□ 1.91
SHANK1-206ENST00000468654 FKBP5Q13451 457 aaPredicted RBP26.96■■□□□ 1.91
SHANK1-206ENST00000468654 UBE3BQ7Z3V4 1068 aa26.96■■□□□ 1.91
SHANK1-206ENST00000468654 SAPCD2Q86UD0 394 aa26.96■■□□□ 1.91
SHANK1-206ENST00000468654 DNAAF4Q8WXU2 420 aa26.96■■□□□ 1.91
SHANK1-206ENST00000468654 GREM2Q9H772 168 aa26.96■■□□□ 1.91
SHANK1-206ENST00000468654 KCNQ5Q9NR82 932 aa26.96■■□□□ 1.91
SHANK1-206ENST00000468654 EGFRP00533 1210 aa26.95■■□□□ 1.9
SHANK1-206ENST00000468654 GCKRQ14397 625 aa26.95■■□□□ 1.9
SHANK1-206ENST00000468654 SPINK5Q9NQ38 1064 aaPredicted RBP26.95■■□□□ 1.9
SHANK1-206ENST00000468654 ZNF609O15014 1411 aa26.95■■□□□ 1.9
SHANK1-206ENST00000468654 AOC2O75106 756 aa26.93■■□□□ 1.9
SHANK1-206ENST00000468654 SAMD7Q7Z3H4 446 aa26.93■■□□□ 1.9
SHANK1-206ENST00000468654 FAM9BQ8IZU0 186 aa26.93■■□□□ 1.9
SHANK1-206ENST00000468654 LINS1Q8NG48 757 aa26.93■■□□□ 1.9
SHANK1-206ENST00000468654 PLA2G12BQ9BX93 195 aa26.93■■□□□ 1.9
SHANK1-206ENST00000468654 MYH16Q9H6N6 1097 aa26.93■■□□□ 1.9
SHANK1-206ENST00000468654 ZNF408Q9H9D4 720 aa26.93■■□□□ 1.9
SHANK1-206ENST00000468654 BSDC1Q9NW68 430 aaPredicted RBP26.93■■□□□ 1.9
SHANK1-206ENST00000468654 VIL1P09327 827 aaKnown RBP26.92■■□□□ 1.9
SHANK1-206ENST00000468654 ATP2B4P23634 1241 aa26.92■■□□□ 1.9
SHANK1-206ENST00000468654 CASP7P55210 303 aa26.92■■□□□ 1.9
SHANK1-206ENST00000468654 TBC1D10BQ4KMP7 808 aaPredicted RBP26.91■■□□□ 1.9
SHANK1-206ENST00000468654 CDC37L1Q7L3B6 337 aa26.91■■□□□ 1.9
SHANK1-206ENST00000468654 G3V3G9 751 aa26.9■■□□□ 1.9
SHANK1-206ENST00000468654 DCAF8Q5TAQ9 597 aa26.9■■□□□ 1.9
SHANK1-206ENST00000468654 DLK2Q6UY11 383 aa26.9■■□□□ 1.9
SHANK1-206ENST00000468654 HHIPL1Q96JK4 782 aa26.9■■□□□ 1.9
SHANK1-206ENST00000468654 MINPP1Q9UNW1 487 aa26.9■■□□□ 1.9
SHANK1-206ENST00000468654 MED23Q9ULK4 1368 aa26.89■■□□□ 1.9
SHANK1-206ENST00000468654 ECM29Q5VYK3 1845 aa26.89■■□□□ 1.9
SHANK1-206ENST00000468654 FAM161AQ3B820 660 aa26.87■■□□□ 1.89
SHANK1-206ENST00000468654 USP48Q86UV5 1035 aa26.87■■□□□ 1.89
SHANK1-206ENST00000468654 ZNF521Q96K83 1311 aa26.87■■□□□ 1.89
SHANK1-206ENST00000468654 PAPPA2Q9BXP8 1791 aa26.86■■□□□ 1.89
SHANK1-206ENST00000468654 CSF1RP07333 972 aa26.86■■□□□ 1.89
SHANK1-206ENST00000468654 ITGA6P23229 1130 aa26.86■■□□□ 1.89
SHANK1-206ENST00000468654 MAP2K2P36507 400 aa26.86■■□□□ 1.89
SHANK1-206ENST00000468654 IGHMBP2P38935 993 aaKnown RBP26.86■■□□□ 1.89
SHANK1-206ENST00000468654 KIF4BQ2VIQ3 1234 aa26.86■■□□□ 1.89
SHANK1-206ENST00000468654 RSBN1LQ6PCB5 846 aaPredicted RBP26.86■■□□□ 1.89
SHANK1-206ENST00000468654 TSKSQ9UJT2 592 aa26.86■■□□□ 1.89
SHANK1-206ENST00000468654 ADM5C9JUS6 153 aa26.85■■□□□ 1.89
SHANK1-206ENST00000468654 CCT4P50991 539 aaKnown RBP26.85■■□□□ 1.89
SHANK1-206ENST00000468654 KRT26Q7Z3Y9 468 aa26.85■■□□□ 1.89
SHANK1-206ENST00000468654 PODNQ7Z5L7 613 aa26.85■■□□□ 1.89
SHANK1-206ENST00000468654 AGBL3Q8NEM8 1001 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms