RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 ZBTB12Q9Y330 459 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-212ENST00000468164 SHTN1A0MZ66 631 aa17.18■□□□□ 0.34
C9orf3-212ENST00000468164 NEURL1BA8MQ27 555 aa17.18■□□□□ 0.34
C9orf3-212ENST00000468164 TRAF5O00463 557 aa17.18■□□□□ 0.34
C9orf3-212ENST00000468164 ECE2O60344 883 aa17.18■□□□□ 0.34
C9orf3-212ENST00000468164 FLIIQ13045 1269 aa17.18■□□□□ 0.34
C9orf3-212ENST00000468164 PAXIP1Q6ZW49 1069 aaPredicted RBP17.18■□□□□ 0.34
C9orf3-212ENST00000468164 UBE3BQ7Z3V4 1068 aa17.18■□□□□ 0.34
C9orf3-212ENST00000468164 ANKRD18AQ8IVF6 992 aa17.18■□□□□ 0.34
C9orf3-212ENST00000468164 ZC3H12CQ9C0D7 883 aaKnown RBP17.18■□□□□ 0.34
C9orf3-212ENST00000468164 CNOT7Q9UIV1 285 aaKnown RBP17.18■□□□□ 0.34
C9orf3-212ENST00000468164 CDHR2Q9BYE9 1310 aa17.18■□□□□ 0.34
C9orf3-212ENST00000468164 PSMD14O00487 310 aa17.17■□□□□ 0.34
C9orf3-212ENST00000468164 CTSWP56202 376 aa17.17■□□□□ 0.34
C9orf3-212ENST00000468164 GRM1Q13255 1194 aa17.17■□□□□ 0.34
C9orf3-212ENST00000468164 COL13A1Q5TAT6 717 aaPredicted RBP17.17■□□□□ 0.34
C9orf3-212ENST00000468164 KCNQ5Q9NR82 932 aa17.17■□□□□ 0.34
C9orf3-212ENST00000468164 GGA1Q9UJY5 639 aa17.17■□□□□ 0.34
C9orf3-212ENST00000468164 H7C1D1 291 aa17.16■□□□□ 0.34
C9orf3-212ENST00000468164 VEGFBP49765 207 aa17.16■□□□□ 0.34
C9orf3-212ENST00000468164 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
C9orf3-212ENST00000468164 MICALL2Q8IY33 904 aa17.16■□□□□ 0.34
C9orf3-212ENST00000468164 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
C9orf3-212ENST00000468164 VAMP4O75379 141 aa17.15■□□□□ 0.34
C9orf3-212ENST00000468164 DEFB115Q30KQ5 88 aa17.15■□□□□ 0.34
C9orf3-212ENST00000468164 TTLL11Q8NHH1 800 aa17.15■□□□□ 0.34
C9orf3-212ENST00000468164 TRPM4Q8TD43 1214 aa17.15■□□□□ 0.34
C9orf3-212ENST00000468164 DNAAF4Q8WXU2 420 aa17.15■□□□□ 0.34
C9orf3-212ENST00000468164 CDC5LQ99459 802 aaKnown RBP17.15■□□□□ 0.34
C9orf3-212ENST00000468164 GREM2Q9H772 168 aa17.15■□□□□ 0.34
C9orf3-212ENST00000468164 ZNF408Q9H9D4 720 aa17.15■□□□□ 0.34
C9orf3-212ENST00000468164 A0A1B0GUL6 1792 aa17.15■□□□□ 0.34
C9orf3-212ENST00000468164 RBM26Q5T8P6 1007 aaKnown RBP17.14■□□□□ 0.33
C9orf3-212ENST00000468164 GLIS2Q9BZE0 524 aaPredicted RBP17.14■□□□□ 0.33
C9orf3-212ENST00000468164 MYH16Q9H6N6 1097 aa17.14■□□□□ 0.33
C9orf3-212ENST00000468164 PODXL2Q9NZ53 605 aa17.14■□□□□ 0.33
C9orf3-212ENST00000468164 XDHP47989 1333 aa17.14■□□□□ 0.33
C9orf3-212ENST00000468164 HIRAP54198 1017 aaPredicted RBP17.13■□□□□ 0.33
C9orf3-212ENST00000468164 GCKRQ14397 625 aa17.13■□□□□ 0.33
C9orf3-212ENST00000468164 TBC1D10BQ4KMP7 808 aaPredicted RBP17.13■□□□□ 0.33
C9orf3-212ENST00000468164 SAMD7Q7Z3H4 446 aa17.13■□□□□ 0.33
C9orf3-212ENST00000468164 RTL9Q8NET4 1388 aa17.13■□□□□ 0.33
C9orf3-212ENST00000468164 F6X3S4 739 aa17.12■□□□□ 0.33
C9orf3-212ENST00000468164 H7C1W4 665 aa17.12■□□□□ 0.33
C9orf3-212ENST00000468164 RASSF10A6NK89 507 aa17.11■□□□□ 0.33
C9orf3-212ENST00000468164 CELF2O95319 508 aaKnown RBP17.11■□□□□ 0.33
C9orf3-212ENST00000468164 LINS1Q8NG48 757 aa17.11■□□□□ 0.33
C9orf3-212ENST00000468164 AIDAQ96BJ3 306 aa17.11■□□□□ 0.33
C9orf3-212ENST00000468164 ZNF646O15015 1829 aaPredicted RBP17.1■□□□□ 0.33
C9orf3-212ENST00000468164 WTIPA6NIX2 430 aaPredicted RBP17.1■□□□□ 0.33
C9orf3-212ENST00000468164 EGFRP00533 1210 aa17.1■□□□□ 0.33
C9orf3-212ENST00000468164 ATP2B4P23634 1241 aa17.1■□□□□ 0.33
C9orf3-212ENST00000468164 IGHMBP2P38935 993 aaKnown RBP17.1■□□□□ 0.33
C9orf3-212ENST00000468164 FAM161AQ3B820 660 aa17.1■□□□□ 0.33
C9orf3-212ENST00000468164 CST9Q5W186 159 aa17.1■□□□□ 0.33
C9orf3-212ENST00000468164 TNS4Q8IZW8 715 aa17.1■□□□□ 0.33
C9orf3-212ENST00000468164 DPF2Q92785 391 aa17.1■□□□□ 0.33
C9orf3-212ENST00000468164 FBXW7Q969H0 707 aa17.1■□□□□ 0.33
C9orf3-212ENST00000468164 CHMP3Q9Y3E7 222 aa17.1■□□□□ 0.33
C9orf3-212ENST00000468164 WDR33Q9C0J8 1336 aaKnown RBP17.1■□□□□ 0.33
C9orf3-212ENST00000468164 CAPN15O75808 1086 aa17.09■□□□□ 0.33
C9orf3-212ENST00000468164 ITGA6P23229 1130 aa17.09■□□□□ 0.33
C9orf3-212ENST00000468164 RPS12P25398 132 aaKnown RBP17.09■□□□□ 0.33
C9orf3-212ENST00000468164 CYP4F22Q6NT55 531 aa17.09■□□□□ 0.33
C9orf3-212ENST00000468164 SLC4A10Q6U841 1118 aa17.09■□□□□ 0.33
C9orf3-212ENST00000468164 USP48Q86UV5 1035 aa17.09■□□□□ 0.33
C9orf3-212ENST00000468164 MPHOSPH8Q99549 860 aa17.09■□□□□ 0.33
C9orf3-212ENST00000468164 BSDC1Q9NW68 430 aaPredicted RBP17.09■□□□□ 0.33
C9orf3-212ENST00000468164 MINPP1Q9UNW1 487 aa17.09■□□□□ 0.33
C9orf3-212ENST00000468164 FOXN1O15353 648 aa17.08■□□□□ 0.32
C9orf3-212ENST00000468164 DLK2Q6UY11 383 aa17.08■□□□□ 0.32
C9orf3-212ENST00000468164 CDC37L1Q7L3B6 337 aa17.08■□□□□ 0.32
C9orf3-212ENST00000468164 ZC3H15Q8WU90 426 aaKnown RBP17.08■□□□□ 0.32
C9orf3-212ENST00000468164 CAPNS2Q96L46 248 aa17.08■□□□□ 0.32
C9orf3-212ENST00000468164 VIL1P09327 827 aaKnown RBP17.07■□□□□ 0.32
C9orf3-212ENST00000468164 CCT4P50991 539 aaKnown RBP17.07■□□□□ 0.32
C9orf3-212ENST00000468164 KIF4BQ2VIQ3 1234 aa17.07■□□□□ 0.32
C9orf3-212ENST00000468164 PGAP2Q9UHJ9 254 aa17.07■□□□□ 0.32
C9orf3-212ENST00000468164 ECE1P42892 770 aa17.06■□□□□ 0.32
C9orf3-212ENST00000468164 KCNJ4P48050 445 aa17.06■□□□□ 0.32
C9orf3-212ENST00000468164 CASP7P55210 303 aa17.06■□□□□ 0.32
C9orf3-212ENST00000468164 RSBN1LQ6PCB5 846 aaPredicted RBP17.06■□□□□ 0.32
C9orf3-212ENST00000468164 DCPSQ96C86 337 aaKnown RBP17.06■□□□□ 0.32
C9orf3-212ENST00000468164 PLA2G12BQ9BX93 195 aa17.06■□□□□ 0.32
C9orf3-212ENST00000468164 TLL2Q9Y6L7 1015 aa17.06■□□□□ 0.32
C9orf3-212ENST00000468164 THSD7BQ9C0I4 1608 aa17.06■□□□□ 0.32
C9orf3-212ENST00000468164 MED23Q9ULK4 1368 aa17.05■□□□□ 0.32
C9orf3-212ENST00000468164 ANKRD18BA2A2Z9 1011 aa17.05■□□□□ 0.32
C9orf3-212ENST00000468164 BEND3Q5T5X7 828 aa17.05■□□□□ 0.32
C9orf3-212ENST00000468164 KRT26Q7Z3Y9 468 aa17.05■□□□□ 0.32
C9orf3-212ENST00000468164 USP17L3A6NCW0 530 aa17.04■□□□□ 0.32
C9orf3-212ENST00000468164 USP17L4A6NCW7 530 aa17.04■□□□□ 0.32
C9orf3-212ENST00000468164 ADM5C9JUS6 153 aa17.04■□□□□ 0.32
C9orf3-212ENST00000468164 AOC2O75106 756 aa17.04■□□□□ 0.32
C9orf3-212ENST00000468164 USP17L1Q7RTZ2 530 aa17.04■□□□□ 0.32
C9orf3-212ENST00000468164 PODNQ7Z5L7 613 aa17.04■□□□□ 0.32
C9orf3-212ENST00000468164 ANKRD2Q9GZV1 360 aa17.04■□□□□ 0.32
C9orf3-212ENST00000468164 GGA3Q9NZ52 723 aa17.04■□□□□ 0.32
C9orf3-212ENST00000468164 C9orf78Q9NZ63 289 aaPredicted RBP17.04■□□□□ 0.32
C9orf3-212ENST00000468164 ZNF804BA4D1E1 1349 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms