RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 RIPK4P57078 832 aa17.79■□□□□ 0.44
RPP40-204ENST00000468105 CDCA5Q96FF9 252 aa17.79■□□□□ 0.44
RPP40-204ENST00000468105 GGA3Q9NZ52 723 aa17.79■□□□□ 0.44
RPP40-204ENST00000468105 C6orf229H3BNL8 230 aa17.78■□□□□ 0.44
RPP40-204ENST00000468105 VIL1P09327 827 aaKnown RBP17.78■□□□□ 0.44
RPP40-204ENST00000468105 KIF4BQ2VIQ3 1234 aa17.78■□□□□ 0.44
RPP40-204ENST00000468105 HSP90AB3PQ58FF7 597 aa17.78■□□□□ 0.44
RPP40-204ENST00000468105 RASAL3Q86YV0 1011 aa17.78■□□□□ 0.44
RPP40-204ENST00000468105 C2orf69Q8N8R5 385 aa17.78■□□□□ 0.44
RPP40-204ENST00000468105 SEC31BQ9NQW1 1179 aa17.78■□□□□ 0.44
RPP40-204ENST00000468105 CCDC102AQ96A19 550 aa17.77■□□□□ 0.44
RPP40-204ENST00000468105 DCPSQ96C86 337 aaKnown RBP17.77■□□□□ 0.44
RPP40-204ENST00000468105 TMPOP42166 694 aaKnown RBP17.76■□□□□ 0.43
RPP40-204ENST00000468105 MKI67P46013 3256 aaKnown RBP17.76■□□□□ 0.43
RPP40-204ENST00000468105 RPS12P25398 132 aaKnown RBP17.75■□□□□ 0.43
RPP40-204ENST00000468105 ANGEL2Q5VTE6 544 aaKnown RBP17.75■□□□□ 0.43
RPP40-204ENST00000468105 PRAMEF18Q5VWM3 479 aa17.75■□□□□ 0.43
RPP40-204ENST00000468105 TMC4Q7Z404 712 aa17.75■□□□□ 0.43
RPP40-204ENST00000468105 HPS5Q9UPZ3 1129 aa17.75■□□□□ 0.43
RPP40-204ENST00000468105 HTTP42858 3142 aa17.75■□□□□ 0.43
RPP40-204ENST00000468105 MAPK8IP3Q9UPT6 1336 aa17.74■□□□□ 0.43
RPP40-204ENST00000468105 CHL1O00533 1208 aa17.74■□□□□ 0.43
RPP40-204ENST00000468105 NEFMP07197 916 aa17.74■□□□□ 0.43
RPP40-204ENST00000468105 ZNF280AP59817 542 aaPredicted RBP17.74■□□□□ 0.43
RPP40-204ENST00000468105 SCARF1Q14162 830 aa17.74■□□□□ 0.43
RPP40-204ENST00000468105 CTU1Q7Z7A3 348 aaKnown RBP17.74■□□□□ 0.43
RPP40-204ENST00000468105 PLBD2Q8NHP8 589 aa17.74■□□□□ 0.43
RPP40-204ENST00000468105 JARID2Q92833 1246 aaPredicted RBP17.74■□□□□ 0.43
RPP40-204ENST00000468105 GMLQ99445 158 aa17.74■□□□□ 0.43
RPP40-204ENST00000468105 R3HDMLQ9H3Y0 253 aa17.74■□□□□ 0.43
RPP40-204ENST00000468105 TRIM35Q9UPQ4 493 aa17.74■□□□□ 0.43
RPP40-204ENST00000468105 ZNF646O15015 1829 aaPredicted RBP17.73■□□□□ 0.43
RPP40-204ENST00000468105 TBC1D8O95759 1140 aa17.73■□□□□ 0.43
RPP40-204ENST00000468105 RPS8P62241 208 aaKnown RBP17.73■□□□□ 0.43
RPP40-204ENST00000468105 ANKRD13DQ6ZTN6 518 aa17.73■□□□□ 0.43
RPP40-204ENST00000468105 BABAM1Q9NWV8 329 aa17.73■□□□□ 0.43
RPP40-204ENST00000468105 PSME4Q14997 1843 aa17.72■□□□□ 0.43
RPP40-204ENST00000468105 IRS4O14654 1257 aaPredicted RBP17.72■□□□□ 0.43
RPP40-204ENST00000468105 CCDC146Q8IYE0 955 aa17.72■□□□□ 0.43
RPP40-204ENST00000468105 ZNF296Q8WUU4 475 aaPredicted RBP17.72■□□□□ 0.43
RPP40-204ENST00000468105 MXD3Q9BW11 206 aa17.72■□□□□ 0.43
RPP40-204ENST00000468105 PODXL2Q9NZ53 605 aa17.72■□□□□ 0.43
RPP40-204ENST00000468105 UBE2Q2LH0YL09 131 aa17.71■□□□□ 0.43
RPP40-204ENST00000468105 ANP32CO43423 234 aa17.71■□□□□ 0.43
RPP40-204ENST00000468105 PRPF38BQ5VTL8 546 aaKnown RBP17.71■□□□□ 0.43
RPP40-204ENST00000468105 SULF1Q8IWU6 871 aa17.71■□□□□ 0.43
RPP40-204ENST00000468105 UFL1O94874 794 aa17.7■□□□□ 0.42
RPP40-204ENST00000468105 NEUROD2Q15784 382 aa17.7■□□□□ 0.42
RPP40-204ENST00000468105 RSBN1LQ6PCB5 846 aaPredicted RBP17.7■□□□□ 0.42
RPP40-204ENST00000468105 CCDC85AQ96PX6 553 aaPredicted RBP17.7■□□□□ 0.42
RPP40-204ENST00000468105 ZNF609O15014 1411 aa17.7■□□□□ 0.42
RPP40-204ENST00000468105 PAPPA2Q9BXP8 1791 aa17.69■□□□□ 0.42
RPP40-204ENST00000468105 NBPF9Q3BBW0 867 aa17.69■□□□□ 0.42
RPP40-204ENST00000468105 HDGFL1Q5TGJ6 251 aa17.69■□□□□ 0.42
RPP40-204ENST00000468105 EYA3Q99504 573 aa17.69■□□□□ 0.42
RPP40-204ENST00000468105 ZC3H12CQ9C0D7 883 aaKnown RBP17.69■□□□□ 0.42
RPP40-204ENST00000468105 LAS1LQ9Y4W2 734 aaKnown RBP17.69■□□□□ 0.42
RPP40-204ENST00000468105 CENPFP49454 3210 aa17.69■□□□□ 0.42
RPP40-204ENST00000468105 BRCA2P51587 3418 aa17.69■□□□□ 0.42
RPP40-204ENST00000468105 TRIM28Q13263 835 aaKnown RBP17.68■□□□□ 0.42
RPP40-204ENST00000468105 PHAXQ9H814 394 aaKnown RBP17.68■□□□□ 0.42
RPP40-204ENST00000468105 PRKRIP1Q9H875 184 aaPredicted RBP17.68■□□□□ 0.42
RPP40-204ENST00000468105 MYOZ2Q9NPC6 264 aa17.68■□□□□ 0.42
RPP40-204ENST00000468105 MKRN3Q13064 507 aaKnown RBP17.67■□□□□ 0.42
RPP40-204ENST00000468105 RALBP1Q15311 655 aa17.67■□□□□ 0.42
RPP40-204ENST00000468105 FZD1Q9UP38 647 aa17.67■□□□□ 0.42
RPP40-204ENST00000468105 AGBL3Q8NEM8 1001 aa17.66■□□□□ 0.42
RPP40-204ENST00000468105 ZBTB38Q8NAP3 1195 aaPredicted RBP17.65■□□□□ 0.42
RPP40-204ENST00000468105 ANKIB1Q9P2G1 1089 aa17.65■□□□□ 0.42
RPP40-204ENST00000468105 DBF4Q9UBU7 674 aaPredicted RBP17.65■□□□□ 0.42
RPP40-204ENST00000468105 GGA1Q9UJY5 639 aa17.65■□□□□ 0.42
RPP40-204ENST00000468105 GPR25O00155 361 aa17.64■□□□□ 0.41
RPP40-204ENST00000468105 USP17L8P0C7I0 530 aa17.64■□□□□ 0.41
RPP40-204ENST00000468105 TM4SF4P48230 202 aa17.64■□□□□ 0.41
RPP40-204ENST00000468105 DUSP27Q5VZP5 1158 aa17.64■□□□□ 0.41
RPP40-204ENST00000468105 TXNRD3Q86VQ6 643 aa17.64■□□□□ 0.41
RPP40-204ENST00000468105 PNNQ9H307 717 aaKnown RBP17.64■□□□□ 0.41
RPP40-204ENST00000468105 FKBP1BP68106 108 aa17.63■□□□□ 0.41
RPP40-204ENST00000468105 MYD88Q99836 296 aa17.63■□□□□ 0.41
RPP40-204ENST00000468105 PITPNM2Q9BZ72 1349 aa17.63■□□□□ 0.41
RPP40-204ENST00000468105 CAP1Q01518 475 aa17.62■□□□□ 0.41
RPP40-204ENST00000468105 PTPN12Q05209 780 aaKnown RBP17.62■□□□□ 0.41
RPP40-204ENST00000468105 DACT2Q5SW24 774 aa17.62■□□□□ 0.41
RPP40-204ENST00000468105 MBIPQ9NS73 344 aa17.62■□□□□ 0.41
RPP40-204ENST00000468105 USP17L3A6NCW0 530 aa17.61■□□□□ 0.41
RPP40-204ENST00000468105 USP17L4A6NCW7 530 aa17.61■□□□□ 0.41
RPP40-204ENST00000468105 WNT10BO00744 389 aa17.61■□□□□ 0.41
RPP40-204ENST00000468105 KLRK1P26718 216 aa17.61■□□□□ 0.41
RPP40-204ENST00000468105 USP17L1Q7RTZ2 530 aa17.61■□□□□ 0.41
RPP40-204ENST00000468105 REM2Q8IYK8 340 aaPredicted RBP17.61■□□□□ 0.41
RPP40-204ENST00000468105 MIER1Q8N108 512 aa17.61■□□□□ 0.41
RPP40-204ENST00000468105 HYPKQ9NX55 129 aa17.61■□□□□ 0.41
RPP40-204ENST00000468105 HDAC9Q9UKV0 1011 aa17.61■□□□□ 0.41
RPP40-204ENST00000468105 SPEF2Q9C093 1822 aa17.61■□□□□ 0.41
RPP40-204ENST00000468105 ELL2O00472 640 aaPredicted RBP17.6■□□□□ 0.41
RPP40-204ENST00000468105 SASH1O94885 1247 aa17.6■□□□□ 0.41
RPP40-204ENST00000468105 PCCAP05165 728 aaPredicted RBP17.6■□□□□ 0.41
RPP40-204ENST00000468105 HOXB7P09629 217 aa17.6■□□□□ 0.41
RPP40-204ENST00000468105 ZNF853P0CG23 659 aa17.6■□□□□ 0.41
RPP40-204ENST00000468105 LMOD3Q0VAK6 560 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms