RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 MINPP1Q9UNW1 487 aa23.56■■□□□ 1.36
YBX1-204ENST00000467957 SPEF2Q9C093 1822 aa23.56■■□□□ 1.36
YBX1-204ENST00000467957 KIF16BQ96L93 1317 aa23.56■■□□□ 1.36
YBX1-204ENST00000467957 ANKRD18BA2A2Z9 1011 aa23.55■■□□□ 1.36
YBX1-204ENST00000467957 LMBR1LQ6UX01 489 aa23.55■■□□□ 1.36
YBX1-204ENST00000467957 GGA1Q9UJY5 639 aa23.55■■□□□ 1.36
YBX1-204ENST00000467957 CCT4P50991 539 aaKnown RBP23.54■■□□□ 1.36
YBX1-204ENST00000467957 FSTL1Q12841 308 aa23.54■■□□□ 1.36
YBX1-204ENST00000467957 IFIT5Q13325 482 aaKnown RBP23.54■■□□□ 1.36
YBX1-204ENST00000467957 KAZALD1Q96I82 304 aa23.54■■□□□ 1.36
YBX1-204ENST00000467957 UFL1O94874 794 aa23.53■■□□□ 1.36
YBX1-204ENST00000467957 ATP2B4P23634 1241 aa23.53■■□□□ 1.36
YBX1-204ENST00000467957 CXCL9Q07325 125 aa23.53■■□□□ 1.36
YBX1-204ENST00000467957 SUCLG2Q96I99 432 aa23.53■■□□□ 1.36
YBX1-204ENST00000467957 MPHOSPH8Q99549 860 aa23.53■■□□□ 1.36
YBX1-204ENST00000467957 ZC3H12CQ9C0D7 883 aaKnown RBP23.53■■□□□ 1.36
YBX1-204ENST00000467957 USP44Q9H0E7 712 aa23.53■■□□□ 1.36
YBX1-204ENST00000467957 TAF1DQ9H5J8 278 aaPredicted RBP23.52■■□□□ 1.36
YBX1-204ENST00000467957 GJA3Q9Y6H8 435 aa23.52■■□□□ 1.36
YBX1-204ENST00000467957 RIMBP2O15034 1052 aa23.51■■□□□ 1.35
YBX1-204ENST00000467957 RABL6Q3YEC7 729 aaPredicted RBP23.51■■□□□ 1.35
YBX1-204ENST00000467957 SMC1BQ8NDV3 1235 aa23.51■■□□□ 1.35
YBX1-204ENST00000467957 HACL1Q9UJ83 578 aa23.51■■□□□ 1.35
YBX1-204ENST00000467957 CHMP3Q9Y3E7 222 aa23.51■■□□□ 1.35
YBX1-204ENST00000467957 YDJCA8MPS7 323 aa23.5■■□□□ 1.35
YBX1-204ENST00000467957 HSPA6P17066 643 aa23.5■■□□□ 1.35
YBX1-204ENST00000467957 CCDC57Q2TAC2 916 aa23.5■■□□□ 1.35
YBX1-204ENST00000467957 CIAPIN1Q6FI81 312 aa23.5■■□□□ 1.35
YBX1-204ENST00000467957 GPR101Q96P66 508 aaPredicted RBP23.5■■□□□ 1.35
YBX1-204ENST00000467957 ANKRD2Q9GZV1 360 aa23.5■■□□□ 1.35
YBX1-204ENST00000467957 IPO8O15397 1037 aaKnown RBP23.49■■□□□ 1.35
YBX1-204ENST00000467957 BCAR3O75815 825 aa23.49■■□□□ 1.35
YBX1-204ENST00000467957 TNIP1Q15025 636 aa23.49■■□□□ 1.35
YBX1-204ENST00000467957 DBNDD1Q9H9R9 158 aa23.49■■□□□ 1.35
YBX1-204ENST00000467957 LEMD3Q9Y2U8 911 aa23.49■■□□□ 1.35
YBX1-204ENST00000467957 EPHX2P34913 555 aa23.48■■□□□ 1.35
YBX1-204ENST00000467957 SCNN1DP51172 638 aa23.48■■□□□ 1.35
YBX1-204ENST00000467957 BICC1Q9H694 974 aaKnown RBP23.48■■□□□ 1.35
YBX1-204ENST00000467957 ECE2O60344 883 aa23.47■■□□□ 1.35
YBX1-204ENST00000467957 RAD17O75943 681 aa23.47■■□□□ 1.35
YBX1-204ENST00000467957 ANKRD44Q8N8A2 993 aa23.47■■□□□ 1.35
YBX1-204ENST00000467957 MED23Q9ULK4 1368 aa23.47■■□□□ 1.35
YBX1-204ENST00000467957 LMOD1P29536 600 aaPredicted RBP23.46■■□□□ 1.35
YBX1-204ENST00000467957 CHRNDQ07001 517 aa23.46■■□□□ 1.35
YBX1-204ENST00000467957 DOK7Q18PE1 504 aa23.46■■□□□ 1.35
YBX1-204ENST00000467957 TAF7LQ5H9L4 462 aa23.46■■□□□ 1.35
YBX1-204ENST00000467957 INTS3Q68E01 1043 aaKnown RBP23.46■■□□□ 1.35
YBX1-204ENST00000467957 PNMA8AQ86V59 439 aaPredicted RBP23.46■■□□□ 1.35
YBX1-204ENST00000467957 ADAMTSL1Q8N6G6 1762 aa23.45■■□□□ 1.34
YBX1-204ENST00000467957 WTIPA6NIX2 430 aaPredicted RBP23.45■■□□□ 1.34
YBX1-204ENST00000467957 ATF7IPQ6VMQ6 1270 aa23.45■■□□□ 1.34
YBX1-204ENST00000467957 LDHAL6AQ6ZMR3 332 aa23.45■■□□□ 1.34
YBX1-204ENST00000467957 LDHDQ86WU2 507 aa23.45■■□□□ 1.34
YBX1-204ENST00000467957 A0A1B0GUL6 1792 aa23.45■■□□□ 1.34
YBX1-204ENST00000467957 ZNF804BA4D1E1 1349 aa23.44■■□□□ 1.34
YBX1-204ENST00000467957 POTEIP0CG38 1075 aa23.44■■□□□ 1.34
YBX1-204ENST00000467957 POTEJP0CG39 1038 aa23.44■■□□□ 1.34
YBX1-204ENST00000467957 TRIM27P14373 513 aa23.44■■□□□ 1.34
YBX1-204ENST00000467957 CHADLQ6NUI6 762 aa23.44■■□□□ 1.34
YBX1-204ENST00000467957 ZNF594Q96JF6 807 aaPredicted RBP23.44■■□□□ 1.34
YBX1-204ENST00000467957 GPRC5DQ9NZD1 345 aa23.44■■□□□ 1.34
YBX1-204ENST00000467957 G3V3G9 751 aa23.43■■□□□ 1.34
YBX1-204ENST00000467957 EPS15P42566 896 aa23.43■■□□□ 1.34
YBX1-204ENST00000467957 GMPSP49915 693 aaPredicted RBP23.43■■□□□ 1.34
YBX1-204ENST00000467957 DCAF8Q5TAQ9 597 aa23.43■■□□□ 1.34
YBX1-204ENST00000467957 PODNQ7Z5L7 613 aa23.43■■□□□ 1.34
YBX1-204ENST00000467957 HDAC5Q9UQL6 1122 aa23.43■■□□□ 1.34
YBX1-204ENST00000467957 SCN9AQ15858 1988 aa23.42■■□□□ 1.34
YBX1-204ENST00000467957 PSMD14O00487 310 aa23.42■■□□□ 1.34
YBX1-204ENST00000467957 UBTFL1P0CB47 393 aaPredicted RBP23.42■■□□□ 1.34
YBX1-204ENST00000467957 FRAT1Q92837 279 aaPredicted RBP23.42■■□□□ 1.34
YBX1-204ENST00000467957 CNNM1Q9NRU3 951 aa23.42■■□□□ 1.34
YBX1-204ENST00000467957 PSME4Q14997 1843 aa23.41■■□□□ 1.34
YBX1-204ENST00000467957 EAPPQ56P03 285 aaPredicted RBP23.41■■□□□ 1.34
YBX1-204ENST00000467957 ZKSCAN2Q63HK3 967 aa23.41■■□□□ 1.34
YBX1-204ENST00000467957 USP50Q70EL3 339 aaPredicted RBP23.41■■□□□ 1.34
YBX1-204ENST00000467957 DPF2Q92785 391 aa23.41■■□□□ 1.34
YBX1-204ENST00000467957 KCNQ5Q9NR82 932 aa23.41■■□□□ 1.34
YBX1-204ENST00000467957 ADARB2Q9NS39 739 aaKnown RBP23.41■■□□□ 1.34
YBX1-204ENST00000467957 VIL1P09327 827 aaKnown RBP23.4■■□□□ 1.34
YBX1-204ENST00000467957 RPS12P25398 132 aaKnown RBP23.4■■□□□ 1.34
YBX1-204ENST00000467957 APLP1P51693 650 aa23.4■■□□□ 1.34
YBX1-204ENST00000467957 C15orf52Q6ZUT6 534 aaKnown RBP23.4■■□□□ 1.34
YBX1-204ENST00000467957 COA1Q9GZY4 146 aa23.4■■□□□ 1.34
YBX1-204ENST00000467957 TAF5LO75529 589 aa23.39■■□□□ 1.33
YBX1-204ENST00000467957 KCNJ4P48050 445 aa23.39■■□□□ 1.33
YBX1-204ENST00000467957 TXNRD3Q86VQ6 643 aa23.39■■□□□ 1.33
YBX1-204ENST00000467957 RIPOR2Q9Y4F9 1068 aa23.39■■□□□ 1.33
YBX1-204ENST00000467957 ZNF609O15014 1411 aa23.39■■□□□ 1.33
YBX1-204ENST00000467957 IRS2Q9Y4H2 1338 aa23.38■■□□□ 1.33
YBX1-204ENST00000467957 HELBQ8NG08 1087 aaPredicted RBP23.38■■□□□ 1.33
YBX1-204ENST00000467957 MEIS3Q99687 375 aa23.38■■□□□ 1.33
YBX1-204ENST00000467957 PUS3Q9BZE2 481 aaKnown RBP23.38■■□□□ 1.33
YBX1-204ENST00000467957 TNNQ9UQP3 1299 aa23.38■■□□□ 1.33
YBX1-204ENST00000467957 ZBTB12Q9Y330 459 aaPredicted RBP23.38■■□□□ 1.33
YBX1-204ENST00000467957 GNAI3P08754 354 aa23.37■■□□□ 1.33
YBX1-204ENST00000467957 CNOT7Q9UIV1 285 aaKnown RBP23.37■■□□□ 1.33
YBX1-204ENST00000467957 CLEC11AQ9Y240 323 aa23.37■■□□□ 1.33
YBX1-204ENST00000467957 MROH5Q6ZUA9 1318 aa23.36■■□□□ 1.33
YBX1-204ENST00000467957 KLRK1P26718 216 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms