RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 PODXL2Q9NZ53 605 aa18.97■□□□□ 0.63
ATPAF2-204ENST00000467560 CNOT7Q9UIV1 285 aaKnown RBP18.97■□□□□ 0.63
ATPAF2-204ENST00000467560 ECE2O60344 883 aa18.96■□□□□ 0.63
ATPAF2-204ENST00000467560 EGFRP00533 1210 aa18.96■□□□□ 0.63
ATPAF2-204ENST00000467560 CTSWP56202 376 aa18.96■□□□□ 0.63
ATPAF2-204ENST00000467560 FLIIQ13045 1269 aa18.96■□□□□ 0.63
ATPAF2-204ENST00000467560 WDR63Q8IWG1 891 aa18.96■□□□□ 0.63
ATPAF2-204ENST00000467560 PGAP2Q9UHJ9 254 aa18.96■□□□□ 0.63
ATPAF2-204ENST00000467560 H7C1W4 665 aa18.95■□□□□ 0.62
ATPAF2-204ENST00000467560 UFL1O94874 794 aa18.95■□□□□ 0.62
ATPAF2-204ENST00000467560 DLK2Q6UY11 383 aa18.95■□□□□ 0.62
ATPAF2-204ENST00000467560 MICALL2Q8IY33 904 aa18.95■□□□□ 0.62
ATPAF2-204ENST00000467560 FAM9BQ8IZU0 186 aa18.95■□□□□ 0.62
ATPAF2-204ENST00000467560 TTLL11Q8NHH1 800 aa18.95■□□□□ 0.62
ATPAF2-204ENST00000467560 GLIS2Q9BZE0 524 aaPredicted RBP18.95■□□□□ 0.62
ATPAF2-204ENST00000467560 GREM2Q9H772 168 aa18.95■□□□□ 0.62
ATPAF2-204ENST00000467560 ABT1Q9ULW3 272 aaKnown RBP18.95■□□□□ 0.62
ATPAF2-204ENST00000467560 HSP90B1P14625 803 aaKnown RBP18.94■□□□□ 0.62
ATPAF2-204ENST00000467560 DEFB115Q30KQ5 88 aa18.94■□□□□ 0.62
ATPAF2-204ENST00000467560 SAMD7Q7Z3H4 446 aa18.94■□□□□ 0.62
ATPAF2-204ENST00000467560 EYA3Q99504 573 aa18.94■□□□□ 0.62
ATPAF2-204ENST00000467560 ANKIB1Q9P2G1 1089 aa18.94■□□□□ 0.62
ATPAF2-204ENST00000467560 FOXN1O15353 648 aa18.93■□□□□ 0.62
ATPAF2-204ENST00000467560 CASP7P55210 303 aa18.93■□□□□ 0.62
ATPAF2-204ENST00000467560 NEXNQ0ZGT2 675 aa18.93■□□□□ 0.62
ATPAF2-204ENST00000467560 UBE3BQ7Z3V4 1068 aa18.93■□□□□ 0.62
ATPAF2-204ENST00000467560 ANKRD18AQ8IVF6 992 aa18.93■□□□□ 0.62
ATPAF2-204ENST00000467560 GGA1Q9UJY5 639 aa18.93■□□□□ 0.62
ATPAF2-204ENST00000467560 SCN9AQ15858 1988 aa18.93■□□□□ 0.62
ATPAF2-204ENST00000467560 FKBP5Q13451 457 aaPredicted RBP18.92■□□□□ 0.62
ATPAF2-204ENST00000467560 GCKRQ14397 625 aa18.92■□□□□ 0.62
ATPAF2-204ENST00000467560 DPF2Q92785 391 aa18.92■□□□□ 0.62
ATPAF2-204ENST00000467560 ZC3H12CQ9C0D7 883 aaKnown RBP18.92■□□□□ 0.62
ATPAF2-204ENST00000467560 H7C1D1 291 aa18.91■□□□□ 0.62
ATPAF2-204ENST00000467560 TBC1D10BQ4KMP7 808 aaPredicted RBP18.91■□□□□ 0.62
ATPAF2-204ENST00000467560 DNAAF4Q8WXU2 420 aa18.91■□□□□ 0.62
ATPAF2-204ENST00000467560 WDR33Q9C0J8 1336 aaKnown RBP18.91■□□□□ 0.62
ATPAF2-204ENST00000467560 F6X3S4 739 aa18.9■□□□□ 0.62
ATPAF2-204ENST00000467560 VIL1P09327 827 aaKnown RBP18.9■□□□□ 0.62
ATPAF2-204ENST00000467560 ZC3H15Q8WU90 426 aaKnown RBP18.9■□□□□ 0.62
ATPAF2-204ENST00000467560 WBP1LQ9NX94 342 aa18.9■□□□□ 0.62
ATPAF2-204ENST00000467560 MINPP1Q9UNW1 487 aa18.9■□□□□ 0.62
ATPAF2-204ENST00000467560 XDHP47989 1333 aa18.9■□□□□ 0.62
ATPAF2-204ENST00000467560 CELF2O95319 508 aaKnown RBP18.89■□□□□ 0.61
ATPAF2-204ENST00000467560 RBM26Q5T8P6 1007 aaKnown RBP18.89■□□□□ 0.61
ATPAF2-204ENST00000467560 CYP4F22Q6NT55 531 aa18.89■□□□□ 0.61
ATPAF2-204ENST00000467560 USP48Q86UV5 1035 aa18.89■□□□□ 0.61
ATPAF2-204ENST00000467560 TLL2Q9Y6L7 1015 aa18.89■□□□□ 0.61
ATPAF2-204ENST00000467560 FAM161AQ3B820 660 aa18.88■□□□□ 0.61
ATPAF2-204ENST00000467560 TNS4Q8IZW8 715 aa18.88■□□□□ 0.61
ATPAF2-204ENST00000467560 LINS1Q8NG48 757 aa18.88■□□□□ 0.61
ATPAF2-204ENST00000467560 CDC5LQ99459 802 aaKnown RBP18.88■□□□□ 0.61
ATPAF2-204ENST00000467560 PLA2G12BQ9BX93 195 aa18.88■□□□□ 0.61
ATPAF2-204ENST00000467560 BSDC1Q9NW68 430 aaPredicted RBP18.88■□□□□ 0.61
ATPAF2-204ENST00000467560 ASTN2O75129 1339 aaPredicted RBP18.88■□□□□ 0.61
ATPAF2-204ENST00000467560 ATP2B4P23634 1241 aa18.87■□□□□ 0.61
ATPAF2-204ENST00000467560 RPS12P25398 132 aaKnown RBP18.87■□□□□ 0.61
ATPAF2-204ENST00000467560 GRM1Q13255 1194 aa18.87■□□□□ 0.61
ATPAF2-204ENST00000467560 CDC37L1Q7L3B6 337 aa18.87■□□□□ 0.61
ATPAF2-204ENST00000467560 SAPCD2Q86UD0 394 aa18.87■□□□□ 0.61
ATPAF2-204ENST00000467560 TXNRD3Q86VQ6 643 aa18.87■□□□□ 0.61
ATPAF2-204ENST00000467560 ZNF521Q96K83 1311 aa18.87■□□□□ 0.61
ATPAF2-204ENST00000467560 CAPNS2Q96L46 248 aa18.87■□□□□ 0.61
ATPAF2-204ENST00000467560 TRPM7Q96QT4 1865 aa18.87■□□□□ 0.61
ATPAF2-204ENST00000467560 ZNF408Q9H9D4 720 aa18.87■□□□□ 0.61
ATPAF2-204ENST00000467560 CSF1RP07333 972 aa18.86■□□□□ 0.61
ATPAF2-204ENST00000467560 ITGA6P23229 1130 aa18.86■□□□□ 0.61
ATPAF2-204ENST00000467560 KLRK1P26718 216 aa18.86■□□□□ 0.61
ATPAF2-204ENST00000467560 BEND3Q5T5X7 828 aa18.86■□□□□ 0.61
ATPAF2-204ENST00000467560 PAXIP1Q6ZW49 1069 aaPredicted RBP18.86■□□□□ 0.61
ATPAF2-204ENST00000467560 SPEF2Q9C093 1822 aa18.86■□□□□ 0.61
ATPAF2-204ENST00000467560 MYH3P11055 1940 aa18.85■□□□□ 0.61
ATPAF2-204ENST00000467560 ADM5C9JUS6 153 aa18.85■□□□□ 0.61
ATPAF2-204ENST00000467560 AOC2O75106 756 aa18.85■□□□□ 0.61
ATPAF2-204ENST00000467560 RSBN1LQ6PCB5 846 aaPredicted RBP18.85■□□□□ 0.61
ATPAF2-204ENST00000467560 GMLQ99445 158 aa18.85■□□□□ 0.61
ATPAF2-204ENST00000467560 MXD3Q9BW11 206 aa18.85■□□□□ 0.61
ATPAF2-204ENST00000467560 G3V3G9 751 aa18.84■□□□□ 0.61
ATPAF2-204ENST00000467560 CAPN15O75808 1086 aa18.84■□□□□ 0.61
ATPAF2-204ENST00000467560 CCT4P50991 539 aaKnown RBP18.84■□□□□ 0.61
ATPAF2-204ENST00000467560 FOXO4P98177 505 aa18.84■□□□□ 0.61
ATPAF2-204ENST00000467560 DCAF8Q5TAQ9 597 aa18.84■□□□□ 0.61
ATPAF2-204ENST00000467560 MYH16Q9H6N6 1097 aa18.84■□□□□ 0.61
ATPAF2-204ENST00000467560 THSD7BQ9C0I4 1608 aa18.84■□□□□ 0.61
ATPAF2-204ENST00000467560 MED23Q9ULK4 1368 aa18.83■□□□□ 0.61
ATPAF2-204ENST00000467560 ZNF280AP59817 542 aaPredicted RBP18.83■□□□□ 0.6
ATPAF2-204ENST00000467560 KIF4BQ2VIQ3 1234 aa18.83■□□□□ 0.6
ATPAF2-204ENST00000467560 EPHA10Q5JZY3 1008 aa18.83■□□□□ 0.6
ATPAF2-204ENST00000467560 KRT26Q7Z3Y9 468 aa18.83■□□□□ 0.6
ATPAF2-204ENST00000467560 SNAP23O00161 211 aa18.82■□□□□ 0.6
ATPAF2-204ENST00000467560 HSPA8P11142 646 aaKnown RBP18.82■□□□□ 0.6
ATPAF2-204ENST00000467560 CTCFP49711 727 aaPredicted RBP18.82■□□□□ 0.6
ATPAF2-204ENST00000467560 LBX1P52954 281 aa18.82■□□□□ 0.6
ATPAF2-204ENST00000467560 AIDAQ96BJ3 306 aa18.82■□□□□ 0.6
ATPAF2-204ENST00000467560 ZNF609O15014 1411 aa18.82■□□□□ 0.6
ATPAF2-204ENST00000467560 IGHMBP2P38935 993 aaKnown RBP18.81■□□□□ 0.6
ATPAF2-204ENST00000467560 PODNQ7Z5L7 613 aa18.81■□□□□ 0.6
ATPAF2-204ENST00000467560 AGBL3Q8NEM8 1001 aa18.81■□□□□ 0.6
ATPAF2-204ENST00000467560 GGA3Q9NZ52 723 aa18.81■□□□□ 0.6
ATPAF2-204ENST00000467560 CACNA1FO60840 1977 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms