RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 HOXD8P13378 290 aaPredicted RBP9.68□□□□□ -0.86
ATG3-204ENST00000467275 NKAPLQ5M9Q1 402 aa9.68□□□□□ -0.86
ATG3-204ENST00000467275 TTC39BQ5VTQ0 682 aaPredicted RBP9.68□□□□□ -0.86
ATG3-204ENST00000467275 OR13H1Q8NG92 308 aa9.67□□□□□ -0.86
ATG3-204ENST00000467275 DYRK3O43781 588 aa9.66□□□□□ -0.86
ATG3-204ENST00000467275 IL22RA1Q8N6P7 574 aa9.66□□□□□ -0.86
ATG3-204ENST00000467275 SPACA7Q96KW9 195 aa9.66□□□□□ -0.86
ATG3-204ENST00000467275 ITGB7P26010 798 aa9.65□□□□□ -0.86
ATG3-204ENST00000467275 SCNN1AP37088 669 aa9.65□□□□□ -0.86
ATG3-204ENST00000467275 HYAL2Q12891 473 aa9.65□□□□□ -0.86
ATG3-204ENST00000467275 DEAF1O75398 565 aaPredicted RBP9.64□□□□□ -0.87
ATG3-204ENST00000467275 PPP1R15AO75807 674 aaPredicted RBP9.64□□□□□ -0.87
ATG3-204ENST00000467275 IGF2-ASQ6U949 168 aa9.64□□□□□ -0.87
ATG3-204ENST00000467275 TP53INP1Q96A56 240 aa9.63□□□□□ -0.87
ATG3-204ENST00000467275 NUDT16Q96DE0 195 aaKnown RBP9.63□□□□□ -0.87
ATG3-204ENST00000467275 ABI2Q9NYB9 513 aaPredicted RBP9.63□□□□□ -0.87
ATG3-204ENST00000467275 TRIM33Q9UPN9 1127 aa9.63□□□□□ -0.87
ATG3-204ENST00000467275 IREB2P48200 963 aaKnown RBP9.62□□□□□ -0.87
ATG3-204ENST00000467275 ZMYM1Q5SVZ6 1142 aa9.62□□□□□ -0.87
ATG3-204ENST00000467275 ATCAYQ86WG3 371 aa9.62□□□□□ -0.87
ATG3-204ENST00000467275 CACTIN-AS1Q8N1I8 211 aa9.62□□□□□ -0.87
ATG3-204ENST00000467275 HELQQ8TDG4 1101 aa9.62□□□□□ -0.87
ATG3-204ENST00000467275 WFDC12Q8WWY7 111 aa9.62□□□□□ -0.87
ATG3-204ENST00000467275 H2AFB1P0C5Y9 115 aa9.61□□□□□ -0.87
ATG3-204ENST00000467275 H2AFB2P0C5Z0 115 aa9.61□□□□□ -0.87
ATG3-204ENST00000467275 PCSK2P16519 638 aa9.61□□□□□ -0.87
ATG3-204ENST00000467275 XP32Q5T750 250 aa9.61□□□□□ -0.87
ATG3-204ENST00000467275 COL13A1Q5TAT6 717 aaPredicted RBP9.61□□□□□ -0.87
ATG3-204ENST00000467275 PDE12Q6L8Q7 609 aaKnown RBP9.61□□□□□ -0.87
ATG3-204ENST00000467275 C14orf37Q86TY3 774 aa9.61□□□□□ -0.87
ATG3-204ENST00000467275 Q8N3U1 123 aa9.61□□□□□ -0.87
ATG3-204ENST00000467275 DLL1O00548 723 aa9.6□□□□□ -0.87
ATG3-204ENST00000467275 SMNDC1O75940 238 aaKnown RBP eCLIP9.6□□□□□ -0.87
ATG3-204ENST00000467275 RPLP1P05386 114 aaKnown RBP9.6□□□□□ -0.87
ATG3-204ENST00000467275 NOM1Q5C9Z4 860 aaKnown RBP9.6□□□□□ -0.87
ATG3-204ENST00000467275 CEP135Q66GS9 1140 aa9.6□□□□□ -0.87
ATG3-204ENST00000467275 ZNF438Q7Z4V0 828 aa9.6□□□□□ -0.87
ATG3-204ENST00000467275 TTC16Q8NEE8 873 aa9.6□□□□□ -0.87
ATG3-204ENST00000467275 DCAF11Q8TEB1 546 aa9.6□□□□□ -0.87
ATG3-204ENST00000467275 EDEM1Q92611 657 aa9.6□□□□□ -0.87
ATG3-204ENST00000467275 MUC3BQ9H195 1237 aa9.6□□□□□ -0.87
ATG3-204ENST00000467275 C1orf115Q9H7X2 142 aa9.6□□□□□ -0.87
ATG3-204ENST00000467275 ELP3Q9H9T3 547 aa9.6□□□□□ -0.87
ATG3-204ENST00000467275 SRA1Q9HD15 236 aaKnown RBP9.6□□□□□ -0.87
ATG3-204ENST00000467275 TMEM88BA6NKF7 163 aa9.59□□□□□ -0.87
ATG3-204ENST00000467275 SSFA2P28290 1259 aa9.59□□□□□ -0.87
ATG3-204ENST00000467275 NOS3P29474 1203 aa9.59□□□□□ -0.87
ATG3-204ENST00000467275 ATP11AP98196 1134 aa9.59□□□□□ -0.87
ATG3-204ENST00000467275 DNM1Q05193 864 aaKnown RBP9.59□□□□□ -0.87
ATG3-204ENST00000467275 PRSS36Q5K4E3 855 aa9.59□□□□□ -0.87
ATG3-204ENST00000467275 NCAPG2Q86XI2 1143 aa9.59□□□□□ -0.87
ATG3-204ENST00000467275 MAP4K3Q8IVH8 894 aa9.59□□□□□ -0.87
ATG3-204ENST00000467275 GTF3C2Q8WUA4 911 aaPredicted RBP9.59□□□□□ -0.87
ATG3-204ENST00000467275 PPME1Q9Y570 386 aa9.59□□□□□ -0.87
ATG3-204ENST00000467275 CYP2E1P05181 493 aaPredicted RBP9.58□□□□□ -0.88
ATG3-204ENST00000467275 SSBP4Q9BWG4 385 aaPredicted RBP9.58□□□□□ -0.88
ATG3-204ENST00000467275 LACRTQ9GZZ8 138 aa9.58□□□□□ -0.88
ATG3-204ENST00000467275 MRPL18Q9H0U6 180 aaKnown RBP9.58□□□□□ -0.88
ATG3-204ENST00000467275 TMEM63CQ9P1W3 806 aa9.58□□□□□ -0.88
ATG3-204ENST00000467275 KIF4AO95239 1232 aa9.57□□□□□ -0.88
ATG3-204ENST00000467275 SETDB1Q15047 1291 aa9.57□□□□□ -0.88
ATG3-204ENST00000467275 C8orf34Q49A92 452 aa9.57□□□□□ -0.88
ATG3-204ENST00000467275 RASSF4Q9H2L5 321 aa9.57□□□□□ -0.88
ATG3-204ENST00000467275 AKTIPQ9H8T0 292 aa9.57□□□□□ -0.88
ATG3-204ENST00000467275 MPSTP25325 297 aa9.56□□□□□ -0.88
ATG3-204ENST00000467275 EIF1AXP47813 144 aaKnown RBP9.56□□□□□ -0.88
ATG3-204ENST00000467275 AAMPQ13685 434 aa9.56□□□□□ -0.88
ATG3-204ENST00000467275 MTMR7Q9Y216 660 aa9.56□□□□□ -0.88
ATG3-204ENST00000467275 SCO2A0A1W2PP80 73 aa9.55□□□□□ -0.88
ATG3-204ENST00000467275 FAM177BA6PVY3 158 aa9.55□□□□□ -0.88
ATG3-204ENST00000467275 LINC01387J3KSC0 135 aa9.55□□□□□ -0.88
ATG3-204ENST00000467275 PDGFAP04085 211 aa9.55□□□□□ -0.88
ATG3-204ENST00000467275 CDC27P30260 824 aa9.55□□□□□ -0.88
ATG3-204ENST00000467275 ALKBH2Q6NS38 261 aa9.55□□□□□ -0.88
ATG3-204ENST00000467275 PBX4Q9BYU1 374 aa9.55□□□□□ -0.88
ATG3-204ENST00000467275 CNTN3Q9P232 1028 aa9.55□□□□□ -0.88
ATG3-204ENST00000467275 KANSL3Q9P2N6 904 aa9.55□□□□□ -0.88
ATG3-204ENST00000467275 ALX3O95076 343 aa9.54□□□□□ -0.88
ATG3-204ENST00000467275 MZF1P28698 734 aaPredicted RBP9.54□□□□□ -0.88
ATG3-204ENST00000467275 CDC25BP30305 580 aa9.54□□□□□ -0.88
ATG3-204ENST00000467275 MTMR3Q13615 1198 aa9.54□□□□□ -0.88
ATG3-204ENST00000467275 TXNDC11Q6PKC3 985 aa9.54□□□□□ -0.88
ATG3-204ENST00000467275 XKR5Q6UX68 686 aa9.54□□□□□ -0.88
ATG3-204ENST00000467275 TMEM130Q8N3G9 435 aa9.54□□□□□ -0.88
ATG3-204ENST00000467275 CEP120Q8N960 986 aa9.54□□□□□ -0.88
ATG3-204ENST00000467275 MEGF10Q96KG7 1140 aa9.54□□□□□ -0.88
ATG3-204ENST00000467275 GGNBP2Q9H3C7 697 aa9.54□□□□□ -0.88
ATG3-204ENST00000467275 CES1P23141 567 aa9.53□□□□□ -0.88
ATG3-204ENST00000467275 FAM117BQ6P1L5 589 aa9.53□□□□□ -0.88
ATG3-204ENST00000467275 A6NHS1 94 aa9.52□□□□□ -0.89
ATG3-204ENST00000467275 F8W735 103 aaPredicted RBP9.52□□□□□ -0.89
ATG3-204ENST00000467275 PTPRAP18433 802 aa9.52□□□□□ -0.89
ATG3-204ENST00000467275 C1orf127Q8N9H9 656 aa9.52□□□□□ -0.89
ATG3-204ENST00000467275 CARNS1A5YM72 827 aa9.51□□□□□ -0.89
ATG3-204ENST00000467275 FOXD4L6Q3SYB3 417 aaPredicted RBP9.51□□□□□ -0.89
ATG3-204ENST00000467275 FOXD4L3Q6VB84 417 aaPredicted RBP9.51□□□□□ -0.89
ATG3-204ENST00000467275 GALNT11Q8NCW6 608 aa9.51□□□□□ -0.89
ATG3-204ENST00000467275 POLIQ9UNA4 740 aa9.51□□□□□ -0.89
ATG3-204ENST00000467275 FAM13AO94988 1023 aa9.5□□□□□ -0.89
ATG3-204ENST00000467275 CD68P34810 354 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms